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43

Delphine LALLIAS - Mes publications


Journal articles22 documents

  • H. Lagarde, Florence Phocas, S. Pouil, Lionel Goardon, M. Bideau, et al.. Are resistances to acute hyperthermia or hypoxia stress similar and consistent between early and late ages in rainbow trout using isogenic lines?. Aquaculture, 2023, 562, ⟨10.1016/j.aquaculture.2022.738800⟩. ⟨hal-03778854⟩
  • Delphine Lallias, Maria Bernard, Céline Ciobotaru, Nicolas Dechamp, Laurent Labbé, et al.. Sources of variation of DNA methylation in rainbow trout: combined effects of temperature and genetic background. Epigenetics, Taylor & Francis, 2020, ⟨10.1080/15592294.2020.1834924⟩. ⟨hal-03003559⟩
  • Clémence Fraslin, Edwige Quillet, Tatiana Rochat, Nicolas Dechamp, Jean François Bernardet, et al.. Combining Multiple Approaches and Models to Dissect the Genetic Architecture of Resistance to Infections in Fish. Frontiers in Genetics, Frontiers, 2020, 11, ⟨10.3389/fgene.2020.00677⟩. ⟨hal-02927380⟩
  • Susana Magadan, Aleksei Krasnov, Saida Hadi-Saljoqi, Sergey Afanasyev, Stanislas S. Mondot, et al.. Standardized IMGT® Nomenclature of Salmonidae IGH Genes, the Paradigm of Atlantic Salmon and Rainbow Trout: From Genomics to Repertoires. Frontiers in Immunology, Frontiers, 2019, 10, ⟨10.3389/fimmu.2019.02541⟩. ⟨hal-02867815⟩
  • Paul B. L. George, Delphine Lallias, Simon Creer, Fiona M. Seaton, John G. Kenny, et al.. Divergent national-scale trends of microbial and animal biodiversity revealed across diverse temperate soil ecosystems. Nature Communications, Nature Publishing Group, 2019, 10, ⟨10.1038/s41467-019-09031-1⟩. ⟨hal-02622552⟩
  • Francisco J. A. Nascimento, Delphine Lallias, Holly M. Bik, Simon Creer. Sample size effects on the assessment of eukaryotic diversity and community structure in aquatic sediments using high-throughput sequencing. Scientific Reports, Nature Publishing Group, 2018, 8, pp.1-12. ⟨10.1038/s41598-018-30179-1⟩. ⟨hal-02623380⟩
  • Delphine Lallias, Edwige Quillet, Marie-Laure Bégout, Benoît Aupérin, Hooi Ling Khaw, et al.. Genetic variability of environmental sensitivity revealed by phenotypic variation in body weight and (its) correlations to physiological and behavioral traits. PLoS ONE, Public Library of Science, 2017, 12 (12), pp.1-19. ⟨10.1371/journal.pone.0189943⟩. ⟨hal-01674985⟩
  • Iliana Bista, Gary R. Carvalho, Kerry Walsh, Mathew Seymour, Mehrdad Hajibabaei, et al.. Annual time-series analysis of aqueous eDNA reveals ecologically relevant dynamics of lake ecosystem biodiversity. Nature Communications, Nature Publishing Group, 2017, 8, pp.1-11. ⟨10.1038/ncomms14087⟩. ⟨hal-01607796⟩
  • Deborah M. Power, Jonathan W. King, Frederico M. Batista, Ana Grade, Hicham Chairi, et al.. New insights about the introduction of the Portuguese oyster, Crassostrea angulata, into the North East Atlantic from Asia based on a highly polymorphic mitochondrial region. Aquatic Living Resources, EDP Sciences, 2016, 29 (4), pp.404. ⟨10.1051/alr/2016035⟩. ⟨hal-01483208⟩
  • Delphine Lallias, Jan G. Hiddink, Vera G. Fonseca, John M. Gaspar, Way Sung, et al.. Environmental metabarcoding reveals heterogeneous drivers of microbial eukaryote diversity in contrasting estuarine ecosystems. ISME Journal, Nature Publishing Group, 2015, 9 (5), pp.1208-1221. ⟨10.1038/ismej.2014.213⟩. ⟨hal-02632597⟩
  • - Mrinalini, Roger S. Thorpe, Simon Creer, Delphine Lallias, Louise Dawnay, et al.. Convergence of multiple markers and analysis methods defines the genetic distinctiveness of cryptic pitvipers. Molecular Phylogenetics and Evolution, Elsevier, 2015, 92, pp.266-279. ⟨10.1016/j.ympev.2015.06.001⟩. ⟨hal-02636436⟩
  • Delphine Lallias, Pierre Boudry, Frederico M. Batista, Andy Beaumont, Jonathan W. King, et al.. Invasion genetics of the Pacific oyster Crassostrea gigas in the British Isles inferred from microsatellite and mitochondrial markers. Biological Invasions, Springer Verlag, 2015, 17 (9), pp.2581 - 2595. ⟨10.1007/s10530-015-0896-1⟩. ⟨hal-01535289⟩
  • Clive J. Fox, Martin I. Taylor, Jeroen van Der Kooij, Natasha Taylor, Stephen P. Milligan, et al.. Identification of marine fish egg predators using molecular probes. Marine Ecology Progress Series, Inter Research, 2012, 462, pp.205-218. ⟨10.3354/meps09748⟩. ⟨hal-02647296⟩
  • V. G. Fonseca, B. Nichols, Delphine Lallias, C. Quince, G. R. Carvalho, et al.. Sample richness and genetic diversity as drivers of chimera formation in nSSU metagenetic analyses. Nucleic Acids Research, Oxford University Press, 2012, 40 (9), pp.1-9. ⟨10.1093/nar/gks002⟩. ⟨hal-02647717⟩
  • Federico M. Batista, Delphine Lallias, Nicolas Taris, Henrique Guedes-Pinto, Andy R. Beaumont. Relative quantification of the M and F mitochondrial DNA types in the blue mussel Mytilus edulis by real-time PCR. Journal of Molluscan Studies, Oxford University Press (OUP), 2011, 77 (1), pp.24-29. ⟨10.1093/mollus/eyq031⟩. ⟨hal-01218839⟩
  • Delphine Lallias, Pierre Boudry, Sylvie Lapègue, Jon W. King, Andy R. Beaumont. Strategies for the retention of high genetic variability in European flat oyster (Ostrea edulis) restoration programmes. Conservation Genetics, Springer Verlag, 2010, 11 (5), pp.1899-1910. ⟨10.1007/s10592-010-0081-0⟩. ⟨hal-02668522⟩
  • Delphine Lallias, Nicolas Taris, P. Boudry, F. Bonhomme, Sylvie Lapegue. Variance in the reproductive success of flat oyster Ostrea edulis L. assessed by parentage analyses in natural and experimental conditions. Genetics Research, Cambridge University Press (CUP), 2010, 92 (3), pp.175-187. ⟨10.1017/S0016672310000248⟩. ⟨hal-02667005⟩
  • Delphine Lallias, Ruth Stockdale, Pierre Boudry, Sylvie Lapegue, Andy R. Beaumont. Characterization of ten microsatellite loci in the blue mussel Mytilus edulis. Journal of Shellfish Research, National Shellfisheries Association, 2009, 28 (3), pp.547-551. ⟨10.2983/035.028.0317⟩. ⟨hal-02662402⟩
  • Delphine Lallias, Ruth Stockdale, Pierre Boudry, Andy R. Beaumont, Sylvie Lapegue. Characterization of 27 microsatellite loci in the European flat oyster Ostrea edulis. Molecular Ecology Resources, Wiley/Blackwell, 2009, 9 (3), pp.960-963. ⟨10.1111/j.1755-0998.2009.02515.x⟩. ⟨hal-02664373⟩
  • Delphine Lallias, L. Gomez-Raya, C.S. Haley, I. Arzul, S. Heurtebise, et al.. Combining two-stage testing and interval mapping strategies to detect QTL for resistance to Bonamiosis in the European flat oyster Ostrea edulis. Marine Biotechnology, Springer Verlag, 2009, 11 (5), pp.570-584. ⟨10.1007/s10126-008-9173-y⟩. ⟨hal-02657151⟩
  • Delphine Lallias, Isabelle Arzul, Serge Heurtebise, Sylvie Ferrand, Bruno Chollet, et al.. Bonamia ostreae-induced mortalities in one-year old European flat oysters Ostrea edulis: experimental infection by cohabitation challenge. Aquatic Living Resources, EDP Sciences, 2008, 21 (4), pp.423-439. ⟨10.1051/alr:2008053⟩. ⟨hal-02658197⟩
  • Delphine Lallias, S. Lapegue, C. Hecquet, P. Boudry, A.R. Beaumont. AFLP-based genetic linkage maps of the blue mussel (Mytilus edulis). Animal Genetics, Wiley-Blackwell, 2007, 38 (4), pp.340-349. ⟨10.1111/j.1365-2052.2007.01611.x⟩. ⟨hal-02660403⟩

Conference papers11 documents

  • Valentin Thomas, Thomas C. Clark, Audrey Laurent, Diego Perojil Morata, Mathieu Charles, et al.. UNDERSTANDING MOLECULAR MECHANISMS OF DISEASE RESISTANCE IN CONSTRASTED RAINBOW TROUT ISOGENIC LINES. International Symposium on Genetics in Aquaculture, Nov 2022, Puerto Varas, Chile. ⟨hal-03778975⟩
  • Florence Phocas, Katy Paul, Audrey Dehaullon, Maria Bernard, Gwendal Restoux, et al.. A NEW 665K SNP ARRAY USED FOR DETECTING SIGNATURES OF POSITIVE SELECTION IN RAINBOW TROUT (ONCORHYNCHUS MYKISS). International Symposium on Genetics in Aquaculture, Nov 2022, Puerto Varas, Chile. ⟨hal-03778981⟩
  • Henri Lagarde, Delphine Lallias, Pierre Patrice, Martin Prchal, Yoannah François, et al.. GENETIC PARAMETERS AND GENOME-WIDE ASSOCIATION STUDY OF RESISTANCE TO ACUTE HYPERTHERMIA IN RAINBOW TROUT. World Congress on Genetics Applied to Livestock Production, Jul 2022, Rotterdam, Netherlands. ⟨hal-03779084⟩
  • Martin Prchal, Delphine Lallias, Henri Lagarde, Jonathan D’ambrosio, Pierre Patrice, et al.. GENOME-WIDE ASSOCIATION STUDY OF HYPOXIA STRESS TOLERANCE IN RAINBOW TROUT. Aquaculture Europe 2021, Oct 2021, Funchal (Madeira), Portugal. ⟨hal-03778912⟩
  • Henri Lagarde, Martin Prchal, Simon Pouil, Lionel Goardon, Marjorie Bideau, et al.. RELATIONSHIP BETWEEN EARLY OR LATE RESISTANCE TO ACUTE TEMPERATURE OR HYPOXIA STRESSES IN SIX RAINBOW TROUT ISOGENIC LINES. Aquaculture Europe 2021, Oct 2021, Funchal (Madeira), Portugal. ⟨hal-03778876⟩
  • Delphine Lallias, Aurélie Chaulot-Talmon, Anne Aubert-Frambourg, Luc Jouneau, Laurent Labbé, et al.. Sources de variation de la méthylation de l'ADN chez la truite arc-en-ciel : effets combinés de la température et du patrimoine génétique. 6ème journée d'animation scientifique autour de l'épigénétique (épiPHASE), Jun 2021, Zoom, France. pp.1031-1052, ⟨10.1080/15592294.2020.1834924⟩. ⟨hal-03779185⟩
  • Delphine Lallias, Anne Aubert-Frambourg, Aurélie Chaulot-Talmon, Luc Jouneau, Laurent Labbé, et al.. IMPACT OF TEMPERATURE REGIME DURING EMBRYONIC DEVELOPMENT ON GENOMEWIDE PATTERNS OF DNA METHYLATION IN LIVER SAMPLES OF JUVENILE RAINBOW TROUT. Aquaculture Europe 2021, Oct 2021, Funchal (Madeira), Portugal. ⟨hal-03778951⟩
  • Delphine Lallias, Edwige Quillet, Maria Bernard, Céline Ciobotaru, Nicolas Dechamp, et al.. Analysis of genomewide patterns of DNA methylation in response to an early temperature stress in rainbow trout. Aquaculture Europe 2019, Oct 2019, Berlin, Germany. ⟨hal-02950585⟩
  • Delphine Lallias, Edwige Quillet, Nicolas Dechamp, Jean-Michel Le Calvez, Marjorie Bideau, et al.. Analysis of genetic variability of global DNA methylation in response to an early temperature stress in rainbow trout. World Aquaculture 2018, European Aquaculture Society (EAS). BEL., Aug 2018, Montpellier, France. 848 p. ⟨hal-02734994⟩
  • Delphine Lallias, Edwige Quillet, Nicolas Dechamp, Maria Bernard, Jean-Michel Le Calvez, et al.. Etude de la variabilité génétique de la méthylation de l'ADN en réponse à un stress de température précoce chez la truite arc-en-ciel. 4. Journée de Séminaires du Département Phase sur l'Epigénétique EpiPhase, May 2018, Nouzilly, France. ⟨hal-02790958⟩
  • Delphine Lallias, Edwige Quillet, Maria Bernard, Nicolas Dechamp, Jean-Michel Le Calvez, et al.. Analysis of genetic variability of DNA methylation in response to an early temperature stress in rainbow trout. 13. International Symposium of Genetics in Aquaculture (ISGA XIII), Jul 2018, Cairns, Australia. ⟨hal-02737362⟩

Poster communications9 documents

  • Simon Pouil, Fany Blanc, Thierry Kerneis, Floriane Colon, Mathilde Dupont-Nivet, et al.. INDIRECT CRITERIA TO IMPROVE FEED EFFICIENCY IN RAINBOW TROUT: LINKS WITH BIOCHEMISTRY AND IMMUNE ACTIVITY. International Symposium on Genetics in Aquaculture, Nov 2022, Puerto Varas, Chile. ⟨hal-03779103⟩
  • Elodie Harte, Michael Marchand, Tina Terrenne, Lionel Goardon, Laurent Labbé, et al.. Impact de la durée de stockage au froid des oeufs embryonnés de truite arc-en-ciel. 7. journée d'animation scientifique autour de l'épigénétique (épiPHASE), Jun 2022, Rennes, France. 2022. ⟨hal-03779238⟩
  • Simon Pouil, Thierry Kerneis, Edwige Quillet, Delphine Lallias, Laurent Labbé, et al.. Testing fat content or feeding behaviour as indirect selection criteria for feed efficiency using trout isogenic lines. World Congress on Genetics Applied to Livestock Production, Jul 2022, Rotterdam, Netherlands. ⟨hal-03778994⟩
  • Henri Lagarde, Delphine Lallias, Pierre Patrice, Martin Prchal, Yoannah François, et al.. IMPROVING RESISTANCE TO ACUTE HYPERTHERMIA BY GENOMIC SELECTION TO ADAPT RAINBOW TROUT LINES TO CLIMATE CHANGE. International Symposium on Genetics in Aquaculture, Nov 2022, Puerto Varas, Chile. ⟨hal-03778988⟩
  • Delphine Lallias, Mekki Boussaha, Maria Bernard, Antoine Peigné, Céline Ciobotaru, et al.. In-depth genomic characterization of a unique collection of rainbow trout isogenic lines. Aquaculture Europe 2019, Oct 2019, Berlin, Germany. ⟨hal-02950600⟩
  • Delphine Lallias, A. Fricot, Jingwei Liu, Lucie Marandel, Nicolas Dechamp, et al.. Etude de la variabilité génétique de la méthylation de l'ADN en réponse à un stress de température précoce chez la truite arc-en-ciel. 5. Journée d'Animation Scientifique du réseau épiPhase, Jun 2019, Toulouse, France. 2019. ⟨hal-02734890⟩
  • Delphine Lallias, Mekki Boussaha, Maria Bernard, Céline Ciobotaru, Nicolas Dechamp, et al.. In-depth genomic characterization of a unique collection of rainbow trout isogenic lines. AQUA 2018, Aug 2018, Montpellier, France. 2018, AQUA 2008 Abstracts Website. ⟨hal-02735893⟩
  • Delphine Lallias, Edwige Quillet, Mathilde Dupont-Nivet, Isabelle Leguen, Patrick Prunet, et al.. AMETHYST : Analyse de la METHYlation après un stress de température chez la truite. 3. Journée de Séminaires du Département Phase sur l'Epigénétique EpiPhase, May 2017, Jouy-en-Josas, France. 2017. ⟨hal-01605305⟩
  • Delphine Lallias, Edwige Quillet, Isabelle Leguen, Patrick Prunet, Lionel Goardon, et al.. AMETHYST : Analyse de la METHYlation après un stress de température chez la truite. 2. Réunion d'Animation épiPHASE, Mar 2016, Saint-Pée-sur-Nivelle, France. 2016. ⟨hal-02799659⟩

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