Delphine LALLIAS

Documents

Identifiants chercheurs

delphine-lallias
0000-0002-1609-0827
IdRef : 253124530

Présentation

Publications

	Isogenic lines of rainbow trout (Oncorhynchus mykiss) as a tool to assess how growth and feeding behaviour are correlated to feed efficiency in fish Simon Pouil , Thierry Kerneis , Edwige Quillet , Laurent Labbé , Delphine Lallias Aquaculture, 2023, 577, pp.739904. ⟨10.1016/j.aquaculture.2023.739904⟩ Article dans une revue hal-04172992v1
	Are resistances to acute hyperthermia or hypoxia stress similar and consistent between early and late ages in rainbow trout using isogenic lines? H. Lagarde , Florence Phocas , Simon Pouil , Lionel Goardon , M. Bideau Aquaculture, 2023, 562, pp.738800. ⟨10.1016/j.aquaculture.2022.738800⟩ Article dans une revue hal-03778854v1
	Genome-wide association study and genomic prediction of tolerance to acute hypoxia in rainbow trout M Prchal , Jonathan D’ambrosio , Henri Lagarde , Delphine Lallias , P Patrice Aquaculture, 2022, 565, pp.739068. ⟨10.1016/j.aquaculture.2022.739068⟩ Article dans une revue hal-03944462v1
	Combining Multiple Approaches and Models to Dissect the Genetic Architecture of Resistance to Infections in Fish Clémence Fraslin , Edwige Quillet , Tatiana Rochat , Nicolas Dechamp , Jean François Bernardet Frontiers in Genetics, 2020, 11, ⟨10.3389/fgene.2020.00677⟩ Article dans une revue hal-02927380v1
	Sources of variation of DNA methylation in rainbow trout: combined effects of temperature and genetic background Delphine Lallias , Maria Bernard , Céline Ciobotaru , Nicolas Dechamp , Laurent Labbé Epigenetics, 2020, ⟨10.1080/15592294.2020.1834924⟩ Article dans une revue hal-03003559v1
	Divergent national-scale trends of microbial and animal biodiversity revealed across diverse temperate soil ecosystems Paul B. L. George , Delphine Lallias , Simon Creer , Fiona M. Seaton , John G. Kenny Nature Communications, 2019, 10, ⟨10.1038/s41467-019-09031-1⟩ Article dans une revue hal-02622552v1
	Standardized IMGT® Nomenclature of Salmonidae IGH Genes, the Paradigm of Atlantic Salmon and Rainbow Trout: From Genomics to Repertoires Susana Magadan , Aleksei Krasnov , Saida Hadi-Saljoqi , Sergey Afanasyev , Stanislas S. Mondot Frontiers in Immunology, 2019, 10, ⟨10.3389/fimmu.2019.02541⟩ Article dans une revue hal-02867815v1
	Sample size effects on the assessment of eukaryotic diversity and community structure in aquatic sediments using high-throughput sequencing Francisco J. A. Nascimento , Delphine Lallias , Holly M. Bik , Simon Creer Scientific Reports, 2018, 8, pp.1-12. ⟨10.1038/s41598-018-30179-1⟩ Article dans une revue hal-02623380v1
	Annual time-series analysis of aqueous eDNA reveals ecologically relevant dynamics of lake ecosystem biodiversity Iliana Bista , Gary R. Carvalho , Kerry Walsh , Mathew Seymour , Mehrdad Hajibabaei Nature Communications, 2017, 8, pp.1-11. ⟨10.1038/ncomms14087⟩ Article dans une revue hal-01607796v1
	Genetic variability of environmental sensitivity revealed by phenotypic variation in body weight and (its) correlations to physiological and behavioral traits Delphine Lallias , Edwige Quillet , Marie-Laure Bégout , Benoît Aupérin , Hooi Ling Khaw PLoS ONE, 2017, 12 (12), pp.1-19. ⟨10.1371/journal.pone.0189943⟩ Article dans une revue hal-01674985v1
	New insights about the introduction of the Portuguese oyster, Crassostrea angulata, into the North East Atlantic from Asia based on a highly polymorphic mitochondrial region Deborah M. Power , Jonathan W. King , Frederico M. Batista , Ana Grade , Hicham Chairi Aquatic Living Resources, 2016, 29 (4), pp.404. ⟨10.1051/alr/2016035⟩ Article dans une revue hal-01483208v1
	Environmental metabarcoding reveals heterogeneous drivers of microbial eukaryote diversity in contrasting estuarine ecosystems Delphine Lallias , Jan G. Hiddink , Vera G. Fonseca , John M. Gaspar , Way Sung The International Society of Microbiologial Ecology Journal, 2015, 9 (5), pp.1208-1221. ⟨10.1038/ismej.2014.213⟩ Article dans une revue hal-02632597v1
	Invasion genetics of the Pacific oyster Crassostrea gigas in the British Isles inferred from microsatellite and mitochondrial markers Delphine Lallias , Pierre Boudry , Frederico M. Batista , Andy Beaumont , Jonathan W. King Biological Invasions, 2015, 17 (9), pp.2581 - 2595. ⟨10.1007/s10530-015-0896-1⟩ Article dans une revue hal-01535289v1
	Convergence of multiple markers and analysis methods defines the genetic distinctiveness of cryptic pitvipers - Mrinalini , Roger S. Thorpe , Simon Creer , Delphine Lallias , Louise Dawnay Molecular Phylogenetics and Evolution, 2015, 92, pp.266-279. ⟨10.1016/j.ympev.2015.06.001⟩ Article dans une revue hal-02636436v1
	Identification of marine fish egg predators using molecular probes Clive J. Fox , Martin I. Taylor , Jeroen van Der Kooij , Natasha Taylor , Stephen P. Milligan Marine Ecology Progress Series, 2012, 462, pp.205-218. ⟨10.3354/meps09748⟩ Article dans une revue hal-02647296v1
	Sample richness and genetic diversity as drivers of chimera formation in nSSU metagenetic analyses V. G. Fonseca , B. Nichols , Delphine Lallias , C. Quince , G. R. Carvalho Nucleic Acids Research, 2012, 40 (9), pp.1-9. ⟨10.1093/nar/gks002⟩ Article dans une revue hal-02647717v1
	Relative quantification of the M and F mitochondrial DNA types in the blue mussel Mytilus edulis by real-time PCR Federico M. Batista , Delphine Lallias , Nicolas Taris , Henrique Guedes-Pinto , Andy R. Beaumont Journal of Molluscan Studies, 2011, 77 (1), pp.24-29. ⟨10.1093/mollus/eyq031⟩ Article dans une revue hal-01218839v1
	Strategies for the retention of high genetic variability in European flat oyster (Ostrea edulis) restoration programmes Delphine Lallias , Pierre Boudry , Sylvie Lapègue , Jon W. King , Andy R. Beaumont Conservation Genetics, 2010, 11 (5), pp.1899-1910. ⟨10.1007/s10592-010-0081-0⟩ Article dans une revue hal-02668522v1
	Variance in the reproductive success of flat oyster Ostrea edulis L. assessed by parentage analyses in natural and experimental conditions Delphine Lallias , Nicolas Taris , P. Boudry , F. Bonhomme , Sylvie Lapegue Genetics Research, 2010, 92 (3), pp.175-187. ⟨10.1017/S0016672310000248⟩ Article dans une revue hal-02667005v1
	Combining two-stage testing and interval mapping strategies to detect QTL for resistance to Bonamiosis in the European flat oyster Ostrea edulis Delphine Lallias , L. Gomez-Raya , C.S. Haley , I. Arzul , S. Heurtebise Marine Biotechnology, 2009, 11 (5), pp.570-584. ⟨10.1007/s10126-008-9173-y⟩ Article dans une revue hal-02657151v1
	Characterization of 27 microsatellite loci in the European flat oyster Ostrea edulis Delphine Lallias , Ruth Stockdale , Pierre Boudry , Andy R. Beaumont , Sylvie Lapegue Molecular Ecology Resources, 2009, 9 (3), pp.960-963. ⟨10.1111/j.1755-0998.2009.02515.x⟩ Article dans une revue hal-02664373v1
	Characterization of ten microsatellite loci in the blue mussel Mytilus edulis Delphine Lallias , Ruth Stockdale , Pierre Boudry , Sylvie Lapegue , Andy R. Beaumont Journal of Shellfish Research, 2009, 28 (3), pp.547-551. ⟨10.2983/035.028.0317⟩ Article dans une revue hal-02662402v1
	Bonamia ostreae-induced mortalities in one-year old European flat oysters Ostrea edulis: experimental infection by cohabitation challenge Delphine Lallias , Isabelle Arzul , Serge Heurtebise , Sylvie Ferrand , Bruno Chollet Aquatic Living Resources, 2008, 21 (4), pp.423-439. ⟨10.1051/alr:2008053⟩ Article dans une revue hal-02658197v1
	AFLP-based genetic linkage maps of the blue mussel (Mytilus edulis) Delphine Lallias , S. Lapegue , C. Hecquet , P. Boudry , A.R. Beaumont Animal Genetics, 2007, 38 (4), pp.340-349. ⟨10.1111/j.1365-2052.2007.01611.x⟩ Article dans une revue hal-02660403v1

	IMPACT OF EARLY COLD TEMPERATURE ON GENOMEWIDE DNA METHYLATION PATTERNS IN JUVENILE RAINBOW TROUT DIVERGENT LINES FOR MUSCLE FAT CONTENT Delphine Lallias , Elodie Harté , Michaël Marchand , Aurélie Chaulot-Talmon , Anne Frambourg Aquaculture Europe, European Aquaculture Society (EAS), Sep 2023, Vienna, Austria. ⟨10.15454/1.5572329612068406E12⟩ Communication dans un congrès hal-04256745v1
	Impact of early cold temperature on response to acute confinement and temperature challenges in juvenile Rainbow trout divergent lines for muscle fat content Simon Pouil , Elodie Harté , Michaël Marchand , Lionel Goardon , Laurent Labbé Aquaculture Europe, Sep 2023, Vienna, Austria. ⟨10.15454/1.5572329612068406E12)⟩ Communication dans un congrès hal-04256795v1
	Impact de la durée de mise au froid des œillés de truite arc-en-ciel (Projet FEAMP EpiCOOL) Jérôme Bugeon , Lucie Marandel , Simon Pouil , Elodie Harte , Michaël Marchand Journées techniques du SYSAAF, SYSAAF, Oct 2023, Rennes, France Communication dans un congrès hal-04256478v1
	GENETIC PARAMETERS AND GENOME-WIDE ASSOCIATION STUDY OF RESISTANCE TO ACUTE HYPERTHERMIA IN RAINBOW TROUT Henri Lagarde , Delphine Lallias , Pierre Patrice , Martin Prchal , Yoannah François World Congress on Genetics Applied to Livestock Production, Jul 2022, Rotterdam, Netherlands Communication dans un congrès hal-03779084v1
	UNDERSTANDING MOLECULAR MECHANISMS OF DISEASE RESISTANCE IN CONSTRASTED RAINBOW TROUT ISOGENIC LINES Valentin Thomas , Thomas C. Clark , Audrey Laurent , Diego Perojil Morata , Mathieu Charles International Symposium on Genetics in Aquaculture, Nov 2022, Puerto Varas, Chile Communication dans un congrès hal-03778975v1
	A NEW 665K SNP ARRAY USED FOR DETECTING SIGNATURES OF POSITIVE SELECTION IN RAINBOW TROUT (ONCORHYNCHUS MYKISS) Florence Phocas , Katy Paul , Audrey Dehaullon , Maria Bernard , Gwendal Restoux International Symposium on Genetics in Aquaculture, Nov 2022, Puerto Varas, Chile Communication dans un congrès hal-03778981v1
	Lignées isogéniques de truite arc-en-ciel : modèle pour étudier la résistance à la SHV Delphine Lallias , Valentin Thomas , Florence Phocas , Edwige Quillet , Pierre Boudinot Journées techniques du SYSAAF, SYSAAF, Oct 2021, Rennes, France Communication dans un congrès hal-04256390v1
	Sources de variation de la méthylation de l'ADN chez la truite arc-en-ciel : effets combinés de la température et du patrimoine génétique Delphine Lallias , Aurélie Chaulot-Talmon , Anne Aubert-Frambourg , Luc Jouneau , Laurent Labbé 6ème journée d'animation scientifique autour de l'épigénétique (épiPHASE), Jun 2021, Zoom, France. pp.1031-1052, ⟨10.1080/15592294.2020.1834924⟩ Communication dans un congrès hal-03779185v1
	GENOME-WIDE ASSOCIATION STUDY OF HYPOXIA STRESS TOLERANCE IN RAINBOW TROUT Martin Prchal , Delphine Lallias , Henri Lagarde , Jonathan D’ambrosio , Pierre Patrice Aquaculture Europe 2021, Oct 2021, Funchal (Madeira), Portugal Communication dans un congrès hal-03778912v1
	IMPACT OF TEMPERATURE REGIME DURING EMBRYONIC DEVELOPMENT ON GENOMEWIDE PATTERNS OF DNA METHYLATION IN LIVER SAMPLES OF JUVENILE RAINBOW TROUT Delphine Lallias , Anne Aubert-Frambourg , Aurélie Chaulot-Talmon , Luc Jouneau , Laurent Labbé Aquaculture Europe 2021, Oct 2021, Funchal (Madeira), Portugal Communication dans un congrès hal-03778951v1
	Relationship between early or late resistance to acute temperature or hypoxia stresses in six rainbow trout isogenic lines Henri Lagarde , Martin Prchal , Simon Pouil , Lionel Goardon , Marjorie Bideau Aquaculture Europe 2021, Oct 2021, Funchal (Madeira), Portugal Communication dans un congrès hal-03778876v1
	Analysis of genomewide patterns of DNA methylation in response to an early temperature stress in rainbow trout Delphine Lallias , Edwige Quillet , Maria Bernard , Céline Ciobotaru , Nicolas Dechamp Aquaculture Europe 2019, Oct 2019, Berlin, Germany Communication dans un congrès hal-02950585v1
	Analysis of genetic variability of DNA methylation in response to an early temperature stress in rainbow trout Delphine Lallias , Edwige Quillet , Maria Bernard , Nicolas Dechamp , Jean-Michel Le Calvez 13. International Symposium of Genetics in Aquaculture (ISGA XIII), Jul 2018, Cairns, Australia Communication dans un congrès hal-02737362v1
	Analysis of genetic variability of global DNA methylation in response to an early temperature stress in rainbow trout Delphine Lallias , Edwige Quillet , Nicolas Dechamp , Jean-Michel Le Calvez , Marjorie Bideau World Aquaculture 2018, European Aquaculture Society (EAS). BEL., Aug 2018, Montpellier, France. 848 p Communication dans un congrès hal-02734994v1
	Etude de la variabilité génétique de la méthylation de l'ADN en réponse à un stress de température précoce chez la truite arc-en-ciel Delphine Lallias , Edwige Quillet , Nicolas Dechamp , Maria Bernard , Jean-Michel Le Calvez 4. Journée de Séminaires du Département Phase sur l'Epigénétique EpiPhase, May 2018, Nouzilly, France Communication dans un congrès hal-02790958v1

	IMPROVING RESISTANCE TO ACUTE HYPERTHERMIA BY GENOMIC SELECTION TO ADAPT RAINBOW TROUT LINES TO CLIMATE CHANGE Henri Lagarde , Delphine Lallias , Pierre Patrice , Martin Prchal , Yoannah François International Symposium on Genetics in Aquaculture, Nov 2022, Puerto Varas, Chile. Poster de conférence hal-03778988v1
	Indirect criteria to improve feed efficiency in rainbow trout: Links with biochemistry and immune activity Simon Pouil , Fany Blanc , Thierry Kerneis , Floriane Colon , Mathilde Dupont-Nivet International Symposium on Genetics in Aquaculture, Nov 2022, Puerto Varas, Chile. Poster de conférence hal-03779103v1
	Impact de la durée de stockage au froid des oeufs embryonnés de truite arc-en-ciel Elodie Harte , Michael Marchand , Tina Terrenne , Lionel Goardon , Laurent Labbé 7. journée d'animation scientifique autour de l'épigénétique (épiPHASE), Jun 2022, Rennes, France. 2022 Poster de conférence hal-03779238v1
	Testing fat content or feeding behaviour as indirect selection criteria for feed efficiency using trout isogenic lines Simon Pouil , Thierry Kerneis , Edwige Quillet , Delphine Lallias , Laurent Labbé World Congress on Genetics Applied to Livestock Production, Jul 2022, Rotterdam, Netherlands. Poster de conférence hal-03778994v1
	In-depth genomic characterization of a unique collection of rainbow trout isogenic lines Delphine Lallias , Mekki Boussaha , Maria Bernard , Antoine Peigné , Céline Ciobotaru Aquaculture Europe 2019, Oct 2019, Berlin, Germany Poster de conférence hal-02950600v1
	Etude de la variabilité génétique de la méthylation de l'ADN en réponse à un stress de température précoce chez la truite arc-en-ciel Delphine Lallias , A. Fricot , Jingwei Liu , Lucie Marandel , Nicolas Dechamp 5. Journée d'Animation Scientifique du réseau épiPhase, Jun 2019, Toulouse, France. 2019 Poster de conférence hal-02734890v1
	In-depth genomic characterization of a unique collection of rainbow trout isogenic lines Delphine Lallias , Mekki Boussaha , Maria Bernard , Céline Ciobotaru , Nicolas Dechamp AQUA 2018, Aug 2018, Montpellier, France. , 2018, AQUA 2008 Abstracts Website Poster de conférence hal-02735893v1
	AMETHYST : Analyse de la METHYlation après un stress de température chez la truite Delphine Lallias , Edwige Quillet , Mathilde Dupont-Nivet , Isabelle Leguen , Patrick Prunet 3. Journée de Séminaires du Département Phase sur l'Epigénétique EpiPhase, May 2017, Jouy-en-Josas, France. 2017 Poster de conférence hal-01605305v1
	AMETHYST : Analyse de la METHYlation après un stress de température chez la truite Delphine Lallias , Edwige Quillet , Isabelle Leguen , Patrick Prunet , Lionel Goardon 2. Réunion d'Animation épiPHASE, Mar 2016, Saint-Pée-sur-Nivelle, France. , 2016 Poster de conférence hal-02799659v1

	Metabarcoding marine sediments: preparation of amplicon libraries Vera G. Fonseca , Delphine Lallias Marine Genomics, 1452, Springer Protocols, Humana Press, 263 p., 2016, Methods in Molecular Biology, 978-1493937721. ⟨10.1007/978-1-4939-3774-5_12⟩ Chapitre d'ouvrage hal-01532582v1

Delphine LALLIAS

Présentation

Publications

Isogenic lines of rainbow trout (Oncorhynchus mykiss) as a tool to assess how growth and feeding behaviour are correlated to feed efficiency in fish

Are resistances to acute hyperthermia or hypoxia stress similar and consistent between early and late ages in rainbow trout using isogenic lines?

Genome-wide association study and genomic prediction of tolerance to acute hypoxia in rainbow trout

Combining Multiple Approaches and Models to Dissect the Genetic Architecture of Resistance to Infections in Fish

Sources of variation of DNA methylation in rainbow trout: combined effects of temperature and genetic background

Divergent national-scale trends of microbial and animal biodiversity revealed across diverse temperate soil ecosystems

Standardized IMGT® Nomenclature of Salmonidae IGH Genes, the Paradigm of Atlantic Salmon and Rainbow Trout: From Genomics to Repertoires

Sample size effects on the assessment of eukaryotic diversity and community structure in aquatic sediments using high-throughput sequencing

Annual time-series analysis of aqueous eDNA reveals ecologically relevant dynamics of lake ecosystem biodiversity

Genetic variability of environmental sensitivity revealed by phenotypic variation in body weight and (its) correlations to physiological and behavioral traits

New insights about the introduction of the Portuguese oyster, Crassostrea angulata, into the North East Atlantic from Asia based on a highly polymorphic mitochondrial region

Environmental metabarcoding reveals heterogeneous drivers of microbial eukaryote diversity in contrasting estuarine ecosystems

Invasion genetics of the Pacific oyster Crassostrea gigas in the British Isles inferred from microsatellite and mitochondrial markers

Convergence of multiple markers and analysis methods defines the genetic distinctiveness of cryptic pitvipers

Identification of marine fish egg predators using molecular probes

Sample richness and genetic diversity as drivers of chimera formation in nSSU metagenetic analyses

Relative quantification of the M and F mitochondrial DNA types in the blue mussel Mytilus edulis by real-time PCR

Strategies for the retention of high genetic variability in European flat oyster (Ostrea edulis) restoration programmes

Variance in the reproductive success of flat oyster Ostrea edulis L. assessed by parentage analyses in natural and experimental conditions

Combining two-stage testing and interval mapping strategies to detect QTL for resistance to Bonamiosis in the European flat oyster Ostrea edulis

Characterization of 27 microsatellite loci in the European flat oyster Ostrea edulis

Characterization of ten microsatellite loci in the blue mussel Mytilus edulis

Bonamia ostreae-induced mortalities in one-year old European flat oysters Ostrea edulis: experimental infection by cohabitation challenge

AFLP-based genetic linkage maps of the blue mussel (Mytilus edulis)

IMPACT OF EARLY COLD TEMPERATURE ON GENOMEWIDE DNA METHYLATION PATTERNS IN JUVENILE RAINBOW TROUT DIVERGENT LINES FOR MUSCLE FAT CONTENT

Impact of early cold temperature on response to acute confinement and temperature challenges in juvenile Rainbow trout divergent lines for muscle fat content

Impact de la durée de mise au froid des œillés de truite arc-en-ciel (Projet FEAMP EpiCOOL)

GENETIC PARAMETERS AND GENOME-WIDE ASSOCIATION STUDY OF RESISTANCE TO ACUTE HYPERTHERMIA IN RAINBOW TROUT

UNDERSTANDING MOLECULAR MECHANISMS OF DISEASE RESISTANCE IN CONSTRASTED RAINBOW TROUT ISOGENIC LINES

A NEW 665K SNP ARRAY USED FOR DETECTING SIGNATURES OF POSITIVE SELECTION IN RAINBOW TROUT (ONCORHYNCHUS MYKISS)

Lignées isogéniques de truite arc-en-ciel : modèle pour étudier la résistance à la SHV

Sources de variation de la méthylation de l'ADN chez la truite arc-en-ciel : effets combinés de la température et du patrimoine génétique

GENOME-WIDE ASSOCIATION STUDY OF HYPOXIA STRESS TOLERANCE IN RAINBOW TROUT

IMPACT OF TEMPERATURE REGIME DURING EMBRYONIC DEVELOPMENT ON GENOMEWIDE PATTERNS OF DNA METHYLATION IN LIVER SAMPLES OF JUVENILE RAINBOW TROUT

Relationship between early or late resistance to acute temperature or hypoxia stresses in six rainbow trout isogenic lines

Analysis of genomewide patterns of DNA methylation in response to an early temperature stress in rainbow trout

Analysis of genetic variability of DNA methylation in response to an early temperature stress in rainbow trout

Analysis of genetic variability of global DNA methylation in response to an early temperature stress in rainbow trout

Etude de la variabilité génétique de la méthylation de l'ADN en réponse à un stress de température précoce chez la truite arc-en-ciel

IMPROVING RESISTANCE TO ACUTE HYPERTHERMIA BY GENOMIC SELECTION TO ADAPT RAINBOW TROUT LINES TO CLIMATE CHANGE

Indirect criteria to improve feed efficiency in rainbow trout: Links with biochemistry and immune activity

Impact de la durée de stockage au froid des oeufs embryonnés de truite arc-en-ciel

Testing fat content or feeding behaviour as indirect selection criteria for feed efficiency using trout isogenic lines

In-depth genomic characterization of a unique collection of rainbow trout isogenic lines

Etude de la variabilité génétique de la méthylation de l'ADN en réponse à un stress de température précoce chez la truite arc-en-ciel

In-depth genomic characterization of a unique collection of rainbow trout isogenic lines

AMETHYST : Analyse de la METHYlation après un stress de température chez la truite

AMETHYST : Analyse de la METHYlation après un stress de température chez la truite

Metabarcoding marine sediments: preparation of amplicon libraries