Modelling Evolution of Regulatory Networks in Artificial Bacteria
Yolanda Sanchez-Dehesa
,
David P. Parsons
,
Jose Maria Pena
,
Guillaume Beslon
Article dans une revue
hal-01500393v1
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The complexity ratchet: stronger than selection
Vincent F Liard
,
Jonathan Rouzaud-Cornabas
,
David P. Parsons
,
Guillaume Beslon
Beacon congress 2018 , Aug 2018, east-lansing, United States. pp.1
Poster de conférence
hal-01938802v1
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Aevol : un modèle individu-centré pour l’étude de la structuration des génomes
David P. Parsons
,
Carole Knibbe
,
Guillaume Beslon
MajecSTIC , Oct 2010, Bordeaux, France
Communication dans un congrès
hal-01381560v1
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From Digital Genetics to Knowledge Discovery: Perspectives in Genetic Network Understanding
Guillaume Beslon
,
David P. Parsons
,
Jose-Maria Pena
,
Christophe Rigotti
,
Yolanda Sanchez-Dehesa
Article dans une revue
hal-00697024v1
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Environmental assessment of urban mobility: Combining life cycle assessment with land-use and transport interaction modelling—Application to Lyon (France)
Cyrille François
,
Natacha Gondran
,
Jean-Pierre Nicolas
,
David Parsons
Article dans une revue
emse-01368062v1
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In silico experimental evolution shows that complexity can rise even in simple environments
Guillaume Beslon
,
Vincent F Liard
,
David P. Parsons
,
Jonathan Rouzaud-Cornabas
ICSB 2018 - 19th International Conference on Systems Biology , Oct 2018, Lyon, France. pp.1
Poster de conférence
hal-01939365v1
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In vitro, in vivo and spectroscopic assessment of lead exposure reduction via ingestion and inhalation pathways using phosphate and iron amendments
Farzana Kastury
,
Euan Smith
,
Emmanuel Doelsch
,
Enzo Lombi
,
Martin Donnelley
,
et al.
Article dans une revue
cirad-02309095v2
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In silico experimental evolution: a tool to test evolutionary scenarios
Bérénice Batut
,
David P. Parsons
,
Stephan Fischer
,
Guillaume Beslon
,
Carole Knibbe
BMC Bioinformatics , 2013, 14 (Suppl 15), pp.S11
Article dans une revue
hal-00873232v1
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Treerecs: an integrated phylogenetic tool, from sequences to reconciliations.
Nicolas Comte
,
Benoît Morel
,
Damir Hasic
,
Laurent Guéguen
,
Bastien Boussau
,
et al.
Article dans une revue
hal-02883386v1
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An alife game to teach evolution of antibiotic resistance
Guillaume Beslon
,
Bérénice Batut
,
David P. Parsons
,
Dominique Schneider
,
Carole Knibbe
ECAL - 12th European Conference on Artificial Life - 2013 , Sep 2013, Taormina, Italy. pp.43-50
Communication dans un congrès
hal-00849345v1
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Scaling Laws in Digital Organisms
Guillaume Beslon
,
Yolanda Sanchez-Dehesa
,
David P. Parsons
,
Jose Maria Pena
,
Carole Knibbe
Proc. Information Processing in Cells and Tissues IPCAT'09 , Apr 2009, Ascona, Switzerland. pp.111-114
Communication dans un congrès
hal-01437632v1
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Data Standards for Artificial Life Software
Alexander Lalejini
,
Emily Dolson
,
Clifford Bohm
,
Austin J Ferguson
,
David P. Parsons
,
et al.
ALIFE 2019 - Conference on Artificial Life , Jul 2019, Newcastle, United Kingdom. pp.507-514,
⟨10.1162/isal_a_00213⟩
Communication dans un congrès
hal-02285716v1
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Homologous and Nonhomologous Rearrangements: Interactions and Effects on Evolvability.
David P. Parsons
,
Carole Knibbe
,
Guillaume Beslon
Proceedings of the Eleventh European Conference on the Synthesis and Simulation of Living Systems (ECAL 11) , Aug 2011, Paris, France. pp.622--629
Communication dans un congrès
hal-00696902v1
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Scaling Laws in Bacterial Genomes: A Side-Effect of Selection of Mutational Robustness
Guillaume Beslon
,
David P. Parsons
,
Yolanda Sanchez-Dehesa
,
Jose-Maria Peña
,
Carole Knibbe
Article dans une revue
inria-00593709v1
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The Complexity Ratchet: Stronger than selection, weaker than robustness
Vincent F Liard
,
David P. Parsons
,
Jonathan Rouzaud-Cornabas
,
Guillaume Beslon
Communication dans un congrès
hal-01882628v1
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Of Evolution, Systems and Complexity
Guillaume Beslon
,
Vincent F Liard
,
David P. Parsons
,
Jonathan Rouzaud-Cornabas
Chapitre d'ouvrage
hal-03136122v1
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Understanding and monitoring the evolution of the Covid-19 epidemic from medical emergency calls: the example of the Paris area
Stéphane Gaubert
,
Marianne Akian
,
Xavier Allamigeon
,
Marin Boyet
,
Baptiste Colin
,
et al.
Article dans une revue
hal-02648075v2
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What happened to my genes? Insights on gene family dynamics from digital genetics experiments
Carole Knibbe
,
David P. Parsons
Communication dans un congrès
hal-01093110v1
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Parsimonious modeling of scaling laws in genomes and transcriptomes
Carole Knibbe
,
David P. Parsons
,
Guillaume Beslon
Proceedings of the Eleventh European Conference on the Synthesis and Simulation of Living Systems (ECAL 11) , Aug 2011, Paris, France. pp.414--415
Communication dans un congrès
hal-00696870v1
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Seaview Version 5: A Multiplatform Software for Multiple Sequence Alignment, Molecular Phylogenetic Analyses, and Tree Reconciliation
Manolo Gouy
,
Eric Tannier
,
Nicolas Comte
,
David Parsons
Chapitre d'ouvrage
hal-03065564v1
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New developments in KisSplice: Combining local and global transcriptome assemblers to decipher splicing in RNA-seq data
Alice Julien-Laferriere
,
Gustavo Sacomoto
,
Rayan Chikhi
,
Erwan Scaon
,
David P. Parsons
,
et al.
Journées Ouvertes en Biologie, Informatique et Mathématiques (JOBIM) , Jul 2013, Toulouse, France
Communication dans un congrès
hal-02069363v1
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How to reduce a genome? ALife as a tool to teach the scientific method to school pupils
Quentin Carde
,
Marco Foley
,
Carole Knibbe
,
David P. Parsons
,
Jonathan Rouzaud-Cornabas
,
et al.
ALIFE 2019 - Conference on Artificial Life , Jul 2019, Newcastle, United Kingdom. pp.497-504,
⟨10.1162/isal_a_00211⟩
Communication dans un congrès
hal-02285718v1
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The complexity ratchet: Stronger than selection, stronger than evolvability, weaker than robustness
Vincent F Liard
,
David P. Parsons
,
Jonathan Rouzaud-Cornabas
,
Guillaume Beslon
Article dans une revue
hal-03136077v1
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Influence of the rearrangement rates on the organization of genome transcription
David P. Parsons
,
Carole Knibbe
,
Guillaume Beslon
Integrative Post-Genomics , Nov 2010, Lyon, France
Communication dans un congrès
hal-01381618v1
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Importance of the rearrangement rates on the organization of transcription.
David P. Parsons
,
Carole Knibbe
,
Guillaume Beslon
Proceedings of Artificial Life XII , Aug 2010, Odense, Denmark. pp.479--486
Communication dans un congrès
hal-00697043v1
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Influence of the rearrangement rates on the organization of genome transcription
David P. Parsons
,
Carole Knibbe
,
Guillaume Beslon
JOBIM , Jun 2010, Montpellier, France
Communication dans un congrès
hal-01381518v1
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The Paradoxical Effects of Allelic Recombination on Fitness
David P. Parsons
,
Carole Knibbe
,
Guillaume Beslon
Proceedings of Artificial Life XIII , Jul 2012, East Lansing, France. pp.536--537
Communication dans un congrès
hal-00759142v1
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Effects of public good properties on the evolution of cooperation
Dusan Misevic
,
Antoine Frenoy
,
David P. Parsons
,
Francois Taddei
Proceedings of Artificial Life XIII , Jul 2012, East Lansing, United States. pp.218--225
Communication dans un congrès
hal-00759140v1
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Evolution of scaling laws in artificial regulation networks
David P. Parsons
,
Guillaume Beslon
,
Carole Knibbe
,
Yolanda Sanchez-Dehesa
,
Jose Maria Pena
Integrative Post-Genomics , Nov 2009, Lyon, France. pp.22-22
Communication dans un congrès
hal-01437814v1
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