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Number of documents

60

CV David Moreira


Journal articles60 documents

  • Luis Javier Galindo, Purificación López-García, Guifré Torruella, Sergey Karpov, David Moreira. Phylogenomics of a new fungal phylum reveals multiple waves of reductive evolution across Holomycota. Nature Communications, Nature Publishing Group, 2021, 12 (1), pp.4973. ⟨10.1038/s41467-021-25308-w⟩. ⟨hal-03383509⟩
  • Purificación López-García, David Moreira. Physical connections: prokaryotes parasitizing their kin. Environmental Microbiology Reports, Wiley, 2021, 13 (1), pp.54-61. ⟨10.1111/1758-2229.12910⟩. ⟨hal-03043477⟩
  • Miguel Iniesto, David Moreira, Guillaume Reboul, Philippe Deschamps, Karim Benzerara, et al.. Core microbial communities of lacustrine microbialites sampled along an alkalinity gradient. Environmental Microbiology, Society for Applied Microbiology and Wiley-Blackwell, 2021, 23, pp.51-68. ⟨10.1111/1462-2920.15252⟩. ⟨hal-02988545⟩
  • Aurélien Saghaï, Yvan Zivanovic, David Moreira, Rosaluz Tavera, Purificación López-García. A novel microbialite-associated phototrophic Chloroflexi lineage exhibiting a quasi-clonal pattern along Depth. Genome Biology and Evolution, Society for Molecular Biology and Evolution, 2020, 12 (7), pp.1207 - 1216. ⟨10.1093/gbe/evaa122⟩. ⟨hal-03003320⟩
  • Gwendoline David, David Moreira, Guillaume Reboul, Nataliia Annenkova, Luis Galindo, et al.. Environmental drivers of plankton protist communities along latitudinal and vertical gradients in the oldest and deepest freshwater lake. Environmental Microbiology, Society for Applied Microbiology and Wiley-Blackwell, In press. ⟨hal-03043428⟩
  • Sergey A. Karpov, Andrey Vishnyakov, Purificación López-García, Natalia Zorina, Maria Ciobanu, et al.. Morphology and molecular phylogeny of Aphelidium insulamus sp. nov. (Aphelida, Opisthosporidia). Protistology, 2020. ⟨hal-03043373⟩
  • Purificación López-García, David Moreira. Cultured Asgard Archaea Shed Light on Eukaryogenesis. Cell, Elsevier, 2020, 181 (2), pp.232-235. ⟨10.1016/j.cell.2020.03.058⟩. ⟨hal-02988522⟩
  • Albert Reñé, Adrià Auladell, Guillaume Reboul, David Moreira, Purificación López-García. Performance of the melting seawater‐ice elution method on the metabarcoding characterization of benthic protist communities. Environmental Microbiology Reports, Wiley, 2020, 12 (3), pp.314-323. ⟨10.1111/1758-2229.12834⟩. ⟨hal-02988536⟩
  • Purificación López-García, David Moreira. The Syntrophy hypothesis for the origin of eukaryotes revisited. Nature Microbiology, Nature Publishing Group, 2020, 5 (5), pp.655-667. ⟨10.1038/s41564-020-0710-4⟩. ⟨hal-02988531⟩
  • José López-García, David Moreira, Karim Benzerara, Olivier Grunewald, Purificación López-García. Origin and Evolution of the Halo-Volcanic Complex of Dallol: Proto-Volcanism in Northern Afar (Ethiopia). Frontiers in Earth Science, Frontiers Media, 2020, 7, ⟨10.3389/feart.2019.00351⟩. ⟨hal-02988490⟩
  • Nina Zeyen, Karim Benzerara, Nicolas Menguy, Jessica Brest, Alexis Templeton, et al.. Fe-bearing phases in modern lacustrine microbialites from Mexico. Geochimica et Cosmochimica Acta, Elsevier, 2019, 253, pp.201-230. ⟨10.1016/j.gca.2019.03.021⟩. ⟨hal-02124836⟩
  • Purificación López-García, David Moreira. Eukaryogenesis, a syntrophy affair. Nature Microbiology, Nature Publishing Group, 2019, 4 (7), pp.1068-1070. ⟨10.1038/s41564-019-0495-5⟩. ⟨hal-02368063⟩
  • Jodie Belilla, David Moreira, Ludwig Jardillier, Guillaume Reboul, Karim Benzerara, et al.. Hyperdiverse archaea near life limits at the polyextreme geothermal Dallol area. Nature Ecology & Evolution, Nature, 2019, 3 (11), pp.1552-1561. ⟨10.1038/s41559-019-1005-0⟩. ⟨hal-02367946⟩
  • Naoji Yubuki, Luis Xavier Galindo, Guillaume Reboul, Purificacion Lopez-Garcia, Matthew Brown, et al.. Ancient Adaptive Lateral Gene Transfers in the Symbiotic Opalina - Blastocystis Stramenopile Lineage. Molecular Biology and Evolution, Oxford University Press (OUP), 2019, 37, pp.651-659. ⟨10.1093/molbev/msz250⟩. ⟨hal-02367918⟩
  • Sergey Karpov, Andrey Vishnyakov, David Moreira, Purificacion Lopez-Garcia. The Ultrastructure of Sanchytrium tribonematis (Sanchytriaceae, Fungi incertae sedis) Confirms its Close Relationship to Amoeboradix. Journal of Eukaryotic Microbiology, Wiley, 2019, ⟨10.1111/jeu.12740⟩. ⟨hal-02365842⟩
  • David Moreira, Purificacion Lopez-Garcia. Time series are critical to understand microbial plankton diversity and ecology. Molecular Ecology, Wiley, 2019, 28 (5), pp.920-922. ⟨10.1111/mec.15015⟩. ⟨hal-02110406⟩
  • Rafael Isaac Ponce Toledo, Purificacion Lopez-Garcia, David Moreira. Horizontal and endosymbiotic gene transfer in early plastid evolution. New Phytologist, Wiley, 2019, ⟨10.1111/nph.15965⟩. ⟨hal-02365884⟩
  • Luis Javier Galindo, Guifré Torruella, David Moreira, Yana Eglit, Alastair Simpson, et al.. Combined cultivation and single-cell approaches to the phylogenomics of nucleariid amoebae, close relatives of fungi. Philosophical Transactions of the Royal Society B: Biological Sciences, Royal Society, The, 2019, 374 (1786), pp.20190094. ⟨10.1098/rstb.2019.0094⟩. ⟨hal-02988477⟩
  • Luis Javier Galindo, Guifré Torruella, David Moreira, Yana Eglit, Alastair Simpson, et al.. Combined cultivation and single-cell approaches to the phylogenomics of nucleariid amoebae, close relatives of fungi. Philosophical Transactions of the Royal Society B: Biological Sciences, Royal Society, The, 2019, 374 (1786), pp.20190094. ⟨10.1098/rstb.2019.0094⟩. ⟨hal-03035936⟩
  • Luis Javier Galindo, Guifré Torruella, David Moreira, Hélène Timpano, Gita Paskerova, et al.. Evolutionary Genomics of Metchnikovella incurvata (Metchnikovellidae): An Early Branching Microsporidium. Genome Biology and Evolution, Society for Molecular Biology and Evolution, 2018, 10 (10), pp.2736-2748. ⟨10.1093/gbe/evy205⟩. ⟨hal-02109065⟩
  • Guillaume Reboul, David Moreira, Paola Bertolino, Alexandra Maria Hillebrand-Voiculescu, Purificación López-García. Microbial eukaryotes in the suboxic chemosynthetic ecosystem of Movile Cave, Romania. Environmental Microbiology Reports, Wiley, 2018, 11 (3), pp.464-473. ⟨10.1111/1758-2229.12756⟩. ⟨hal-02369191⟩
  • Sergey Karpov, Purificacion Lopez-Garcia, Maria Mamkaeva, Vladimir Klimov, Andrey Vishnyakov, et al.. The Chytrid-like Parasites of Algae Amoeboradix gromovi gen. et sp. nov. and Sanchytrium tribonematis Belong to a New Fungal Lineage. Protist, Elsevier, 2018, 169 (1), pp.122-140. ⟨10.1016/j.protis.2017.11.002⟩. ⟨hal-02109182⟩
  • Sergey Karpov, David Moreira, Maria Mamkaeva, Olga Popova, Vladimir Aleoshine, et al.. New member of Gromochytriales (Chytridiomycetes) - Apiochytrium granulosporum nov. gen. et sp. Journal of Eukaryotic Microbiology, Wiley, 2018. ⟨hal-02108862⟩
  • Rafael Ponce-Toledo, David Moreira, Purificacion Lopez-Garcia, Philippe Deschamps. Secondary Plastids of Euglenids and Chlorarachniophytes Function with a Mix of Genes of Red and Green Algal Ancestry. Molecular Biology and Evolution, Oxford University Press (OUP), 2018, 35 (9), pp.2198-2204. ⟨10.1093/molbev/msy121⟩. ⟨hal-02108901⟩
  • David López-Escardó, Purificacion Lopez-Garcia, David Moreira, Iñaki Ruiz-Trillo, Guifré Torruella. Parvularia atlantis gen. et sp. nov., a Nucleariid Filose Amoeba (Holomycota, Opisthokonta). Journal of Eukaryotic Microbiology, Wiley, 2018, 65 (2), pp.170-179. ⟨10.1111/jeu.12450⟩. ⟨hal-02109097⟩
  • Guifré Torruella, Xavier Grau-Bové, David Moreira, Sergey Karpov, John Burns, et al.. Global transcriptome analysis of the aphelid Paraphelidium tribonemae supports the phagotrophic origin of fungi. Communications Biology, Nature Publishing Group, 2018, 1 (1), ⟨10.1038/s42003-018-0235-z⟩. ⟨hal-02108878⟩
  • Ana Gutiérrez-Preciado, Aurélien Saghaï, David Moreira, Yvan Zivanovic, Philippe Deschamps, et al.. Functional shifts in microbial mats recapitulate early Earth metabolic transitions. Nature Ecology & Evolution, Nature, 2018, 2 (11), pp.1700-1708. ⟨10.1038/s41559-018-0683-3⟩. ⟨hal-02996248⟩
  • Nithavong Cam, Karim Benzerara, Thomas Georgelin, Maguy Jaber, Jean-François Lambert, et al.. Cyanobacterial formation of intracellular Ca-carbonates in undersaturated solutions. Geobiology, Wiley, 2018, 16 (1), pp.49-61. ⟨10.1111/gbi.12261⟩. ⟨hal-01655173⟩
  • David Moreira, Rosaluz Tavera, Karim Benzerara, Fériel Skouri-Panet, Estelle Couradeau, et al.. Description of Gloeomargarita lithophora gen. nov., sp. nov., a thylakoid-bearing, basal-branching cyanobacterium with intracellular carbonates, and proposal for Gloeomargaritales ord. nov.. International Journal of Systematic and Evolutionary Microbiology, Microbiology Society, 2017, 67 (3), pp.653-658. ⟨10.1099/ijsem.0.001679⟩. ⟨hal-01741639⟩
  • Rafael Ponce-Toledo, Philippe Deschamps, Purificación López-García, Yvan Zivanovic, Karim Benzerara, et al.. An Early-Branching Freshwater Cyanobacterium at the Origin of Plastids. Current Biology - CB, Elsevier, 2017, 27 (3), pp.386-391. ⟨10.1016/j.cub.2016.11.056⟩. ⟨hal-01741643⟩
  • Nina Zeyen, Damien Daval, Purification Lopez-Garcia, David Moreira, Jerôme Gaillardet, et al.. Geochemical Conditions Allowing the Formation of Modern Lacustrine Microbialites. Procedia Earth and Planetary Science, Elsevier, 2017, 17, pp.380 - 383. ⟨10.1016/j.proeps.2016.12.096⟩. ⟨hal-01440538⟩
  • Miguel Iniesto, Ángela D. Buscalioni, M. Carmen Guerrero, Karim Benzerara, David Moreira, et al.. Involvement of microbial mats in early fossilization by decay delay and formation of impressions and replicas of vertebrates and invertebrates. Scientific Reports, Nature Publishing Group, 2016, 6, pp.25716. ⟨10.1038/srep25716⟩. ⟨hal-01319247⟩
  • Jinhua Li, Isabel Margaret-Oliver, Nithavong Cam, Thomas Boudier, Marine Blondeau, et al.. Biomineralization Patterns of Intracellular Carbonatogenesis in Cyanobacteria: Molecular Hypotheses. Minerals, MDPI, 2016, 6 (1), pp.10. ⟨10.3390/min6010010⟩. ⟨hal-01310553⟩
  • Aurélien Saghaï, Yvan Zivanovic, David Moreira, Karim Benzerara, Paola Bertolino, et al.. Comparative metagenomics unveils functions and genome features of microbialite-associated communities along a depth gradient. Environmental Microbiology, Society for Applied Microbiology and Wiley-Blackwell, 2016, ⟨10.1111/1462-2920.13456⟩. ⟨hal-01412335⟩
  • Marianne Simon, Purificación López-García, Philippe Deschamps, Gwendal Restoux, Paola Bertolino, et al.. Resilience of Freshwater Communities of Small Microbial Eukaryotes Undergoing Severe Drought Events. Frontiers in Microbiology, Frontiers Media, 2016, 7, pp.812. ⟨10.3389/fmicb.2016.00812⟩. ⟨hal-01587905⟩
  • Nina Zeyen, Karim Benzerara, Jinhua Li, Alexis Groleau, Etienne Balan, et al.. Formation of low-T hydrated silicates in modern microbialites from Mexico and implications for microbial fossilization. Frontiers in Earth Science, Frontiers Media, 2015, 3, pp.64. ⟨10.3389/feart.2015.00064⟩. ⟨hal-01226254⟩
  • Marianne Simon, Ludwig Jardillier, Philippe Deschamps, David Moreira, Gwendal Restoux, et al.. Complex communities of small protists and unexpected occurrence of typical marine lineages in shallow freshwater systems. Environmental Microbiology, Society for Applied Microbiology and Wiley-Blackwell, 2015, 17 (10), pp.3610-3627. ⟨10.1111/1462-2920.12591⟩. ⟨hal-03022575⟩
  • Aurélien Saghaï, Yvan Zivanovic, Nina Zeyen, David Moreira, Karim Benzerara, et al.. Metagenome-based diversity analyses suggest a significant contribution of non-cyanobacterial lineages to carbonate precipitation in modern microbialites. Frontiers in Microbiology, Frontiers Media, 2015, 6, pp.797. ⟨10.3389/fmicb.2015.00797⟩. ⟨hal-01221204⟩
  • Purificación López-García, Yvan Zivanovic, Philippe Deschamps, David Moreira. Bacterial gene import and mesophilic adaptation in archaea. Nature Reviews Microbiology, Nature Publishing Group, 2015, 13 (7), pp.447 - 456. ⟨10.1038/nrmicro3485⟩. ⟨hal-01438307⟩
  • Marie Ragon, Karim Benzerara, David Moreira, Rosaluz Tavera, Purificación López-García. 16S rDNA-based analysis reveals cosmopolitan occurrence but limited diversity of two cyanobacterial lineages with contrasted patterns of intracellular carbonate mineralization. Frontiers in Microbiology, Frontiers Media, 2014, 5, pp.331. ⟨10.3389/fmicb.2014.00331⟩. ⟨hal-01321248⟩
  • Sergey A. Karpov, Maria A. Mamkaeva, Karim Benzerara, David Moreira, Purificación López-García. Molecular PhylogenyandUltrastructure of Aphelidium aff.melosirae (Aphelida, Opisthosporidia). Protist, Elsevier, 2014, 165, pp.512-526. ⟨10.1016/j.protis.2014.05.003⟩. ⟨hal-01049981⟩
  • Charles Bachy, David Moreira, John R. Dolan, Purificación López-García. Seasonal dynamics of free-living tintinnid ciliate communities revealed by environmental sequences from the North-West Mediterranean Sea. FEMS MICROBIOLOGY ECOLOGY, 2014, 87 (2), pp.330-342. ⟨10.1111/1574-6941.12224⟩. ⟨hal-03502774⟩
  • Karim Benzerara, Feriel Skouri-Panet, Jinhua Li, Céline Férard, Muriel Gugger, et al.. Intracellular Ca-carbonate biomineralization is widespread in cyanobacteria.. Proceedings of the National Academy of Sciences of the United States of America , National Academy of Sciences, 2014, 111 (30), pp.10933-8. ⟨10.1073/pnas.1403510111⟩. ⟨hal-01101603⟩
  • Charles Bachy, John R. Dolan, Purificación López-García, Philippe Deschamps, David Moreira. Accuracy of protist diversity assessments: morphology compared with cloning and direct pyrosequencing of 18S rRNA genes and ITS regions using the conspicuous tintinnid ciliates as a case study. ISME JOURNAL, 2013, 7 (2), pp.244-255. ⟨10.1038/ismej.2012.106⟩. ⟨hal-03502641⟩
  • Charles Bachy, Fernando Gomez, Purificación López-García, John R. Dolan, David Moreira. Molecular Phylogeny of Tintinnid Ciliates (Tintinnida, Ciliophora). Protist, 2012, 163 (6), pp.873-887. ⟨10.1016/j.protis.2012.01.001⟩. ⟨hal-03502657⟩
  • Fernando Gomez, Purificación López-García, John R. Dolan, David Moreira. Molecular phylogeny of the marine dinoflagellate genus Heterodinium (Dinophyceae). EUROPEAN JOURNAL OF PHYCOLOGY, 2012, 47 (2), pp.95-104. ⟨10.1080/09670262.2012.662722⟩. ⟨hal-03502685⟩
  • Estelle Couradeau, Karim Benzerara, David Moreira, Emmanuelle Gerard, Jozef Kazmierczak, et al.. Prokaryotic and Eukaryotic Community Structure in Field and Cultured Microbialites from the Alkaline Lake Alchichica (Mexico). PLoS ONE, Public Library of Science, 2012, 6 (12), pp.e28767. ⟨10.1371/journal.pone.0028767⟩. ⟨hal-00677228⟩
  • Marie Ragon, Gwendal Restoux, David Moreira, Anders Pape Møller, Purificación López-García. Sunlight-Exposed Biofilm Microbial Communities Are Naturally Resistant to Chernobyl Ionizing-Radiation Levels. PLoS ONE, Public Library of Science, 2011, ⟨10.1371/journal.pone.0021764⟩. ⟨hal-03021697⟩
  • Achim Quaiser, Yvan Zivanovic, David Moreira, Purificación López-García. Comparative metagenomics of bathypelagic plankton and bottom sediment from the Sea of Marmara. ISME Journal, Nature Publishing Group, 2011, 5 (2), pp.285-304. ⟨10.1038/ismej.2010.113⟩. ⟨hal-00561029⟩
  • Céline Brochier-Armanet, Philippe Deschamps, Purificación López-García, Yvan Zivanovic, Francisco Rodríguez-Valera, et al.. Complete-fosmid and fosmid-end sequences reveal frequent horizontal gene transfers in marine uncultured planktonic archaea.. ISME Journal, Nature Publishing Group, 2011, 5 (8), pp.1291-302. ⟨10.1038/ismej.2011.16⟩. ⟨hal-00662567⟩
  • Philippe Deschamps, Christophe Colleoni, Yasunori Nakamura, Eiji Suzuki, Jean-Luc Putaux, et al.. Metabolic Symbiosis and the Birth of the Plant Kingdom.. Molecular Biology and Evolution, Oxford University Press (OUP), 2007, 25 (3), epub ahead of print. ⟨10.1093/molbev/msm280⟩. ⟨hal-00250123⟩
  • Robert Pascal, Laurent Boiteau, Patrick Forterre, M. Gargaud, Antonio Lazcano, et al.. Prebiotic Chemistry – Biochemistry – Emergence of Life (4.4–2 Ga). Earth, Moon, and Planets, Springer Verlag, 2006, 98, pp.153-203. ⟨10.1007/s11038-006-9089-3⟩. ⟨hal-00112041⟩
  • Hélène Moussard, Ghislaine Henneke, David Moreira, Vincent Jouffe, Purificación López-García, et al.. Thermophilic lifestyle for an uncultured archaeon from hydrothermal vents: evidence from environmental genomics. Applied and Environmental Microbiology, American Society for Microbiology, 2006, 72 (3), pp.2268-2271. ⟨10.1128/AEM.72.3.2268-2271.2006⟩. ⟨hal-00617096⟩
  • Karim Benzerara, Virginie Chapon, David Moreira, Purificación López-García, François Guyot, et al.. Microbial diversity on the Tatahouine meteorite. Meteoritics and Planetary Science, Wiley, 2006, 41 (8), pp.1249-1265. ⟨10.1111/j.1945-5100.2006.tb00519.x⟩. ⟨hal-01560924⟩
  • Hélène Moussard, David Moreira, Marie-Anne Cambon-Bonavita, Purificación López-García, Christian Jeanthon. Uncultured Archaea in a hydrothermal microbial assemblage: phylogenetic diversity and characterization of a genome fragment from a euryarchaeote. FEMS Microbiology Ecology, Wiley-Blackwell, 2006, 57 (3), pp.452-469. ⟨10.1111/j.1574-6941.2006.00128.x⟩. ⟨hal-00617104⟩
  • Purificación López-García, Józef Kazmierczak, Karim Benzerara, Stephan Kempe, François Guyot, et al.. Bacterial diversity and carbonate precipitation in the giant microbialites from the highly alkaline Lake Van, Turkey.. Extremophiles, Springer Verlag, 2005, 9, pp.263-274. ⟨10.1007/s00792-005-0457-0⟩. ⟨hal-00021666⟩
  • Céline Brochier, Eric Bapteste, David Moreira, Hervé Philippe. Eubacterial phylogeny based on translational apparatus proteins. Trends in Genetics, Elsevier, 2002, 18 (1), pp.1-5. ⟨10.1016/s0168-9525(01)02522-7⟩. ⟨hal-02335701⟩
  • Céline Brochier, Hervé Philippe, David Moreira. The evolutionary history of ribosomal protein RpS14: horizontal gene transfer at the heart of the ribosome. Trends in Genetics, Elsevier, 2000, 16 (12), pp.529-533. ⟨10.1016/s0168-9525(00)02142-9⟩. ⟨hal-02335661⟩
  • Heinui Philippe, P. Lopez, H. Brinkmann, K. Budin, Agnès Germot, et al.. Early branching or fast evolving eukaryotes? An answer based on slowly evolving positions.. Philosophical Transactions of the Royal Society B: Biological Sciences, Royal Society, The, 2000, 267, pp.1213-1221. ⟨hal-02689056⟩
  • Heinui Philippe, Agnès Germot, David Moreira. The new phylogeny of eukaryotes.. Current Opinion in Genetics and Development, Elsevier, 2000, 10, pp.596-601. ⟨hal-02694637⟩