David Moreira Fernandez

Documents

Publications

	Widespread formation of intracellular calcium carbonates by the bloom‐forming cyanobacterium Microcystis Juliette Gaëtan , Sébastien Halary , Maxime Millet , Cécile Bernard , Charlotte Duval Environmental Microbiology, 2023, 25 (3), pp.751-765. ⟨10.1111/1462-2920.16322⟩ Article dans une revue hal-04069101v1
	Molecular and morphological characterization of four new ancyromonad genera and proposal for an updated taxonomy of the Ancyromonadida Naoji Yubuki , Guifré Torruella , Luis Javier Galindo , Aaron A Heiss , Maria Cristina Ciobanu Journal of Eukaryotic Microbiology, 2023, 70 (6), pp.e12997. ⟨10.1111/jeu.12997⟩ Article dans une revue hal-04272301v1
	Maturases and Group II Introns in the Mitochondrial Genomes of the Deepest Jakobid Branch Luis Javier Galindo , Kristina Prokina , Guifré Torruella , Purificación López-García , David Moreira Genome Biology and Evolution, 2023, 15 (4), ⟨10.1093/gbe/evad058⟩ Article dans une revue hal-04384792v1
	Morphological and molecular characterization of a new member of the phylum Rhodelphidia Kristina Prokina , Denis Tikhonenkov , Purificación López-García , David Moreira Journal of Eukaryotic Microbiology, 2023, ⟨10.1111/jeu.12995⟩ Article dans une revue hal-04384777v1
	Phylogenomics Supports the Monophyly of Aphelids and Fungi and Identifies New Molecular Synapomorphies Luis Javier Galindo , Guifré Torruella , Purificación López-García , Maria Ciobanu , Ana Gutiérrez-Preciado Systematic Biology, 2022, ⟨10.1093/sysbio/syac054⟩ Article dans une revue hal-04108762v1
	Planktonic microbial communities from microbialite‐bearing lakes sampled along a salinity‐alkalinity gradient Miguel Iniesto , David Moreira , Karim Benzerara , Guillaume Reboul , Paola Bertolino Limnology and Oceanography, 2022, ⟨10.1002/lno.12233⟩ Article dans une revue hal-03845854v1
	Independent Size Expansions and Intron Proliferation in Red Algal Plastid and Mitochondrial Genomes Fabian van Beveren , Laura Eme , Purificación López-García , Maria Ciobanu , David Moreira Genome Biology and Evolution, 2022, 14 (4), ⟨10.1093/gbe/evac037⟩ Article dans une revue hal-03800403v1
	Site-and-branch-heterogeneous analyses of an expanded dataset favour mitochondria as sister to known Alphaproteobacteria Sergio A Muñoz-Gómez , Edward Susko , Kelsey Williamson , Laura Eme , Claudio H. Slamovits Nature Ecology & Evolution, 2022, 6, pp.253-262. ⟨10.1038/s41559-021-01638-2⟩ Article dans une revue hal-03847570v1
	A phylogenetic and proteomic reconstruction of eukaryotic chromatin evolution Xavier Grau-Bové , Cristina Navarrete , Cristina Chiva , Thomas Pribasnig , Meritxell Antó Nature Ecology & Evolution, 2022, 6, pp.1007-1023. ⟨10.1038/s41559-022-01771-6⟩ Article dans une revue hal-03847593v1
	Expanding the molecular and morphological diversity of Apusomonadida, a deep‐branching group of gliding bacterivorous protists Guifré Torruella , Luis Javier Galindo , David Moreira , Maria Ciobanu , Aaron Heiss Journal of Eukaryotic Microbiology, 2022, 70 (2), pp.e12956. ⟨10.1111/jeu.12956⟩ Article dans une revue hal-04384861v1
	A New Gene Family Diagnostic for Intracellular Biomineralization of Amorphous Ca Carbonates by Cyanobacteria Karim Benzerara , Elodie Duprat , Tristan Bitard-Feildel , Géraldine Caumes , Corinne Cassier-Chauvat Genome Biology and Evolution, 2022, 14 (3), pp.evac026. ⟨10.1093/gbe/evac026⟩ Article dans une revue hal-03616840v2
	Physical connections: prokaryotes parasitizing their kin Purificación López-García , David Moreira Environmental Microbiology Reports, 2021, 13 (1), pp.54-61. ⟨10.1111/1758-2229.12910⟩ Article dans une revue hal-03043477v1
	Reductive evolution and unique predatory mode in the CPR bacterium Vampirococcus lugosii David Moreira , Yvan Zivanovic , Ana López-Archilla , Miguel Iniesto , Purificación López-García Nature Communications, 2021, 12 (1), pp.2454. ⟨10.1038/s41467-021-22762-4⟩ Article dans une revue hal-03380222v1
	Archaeal overdominance close to life-limiting conditions in geothermally influenced hypersaline lakes at the Danakil Depression, Ethiopia Jodie Belilla , Miguel Iniesto , David Moreira , Karim Benzerara , José María López‐garcía Environmental Microbiology, 2021, ⟨10.1111/1462-2920.15771⟩ Article dans une revue hal-03384106v1
	Rapid formation of mature microbialites in Lake Alchichica, Mexico Miguel Iniesto , David Moreira , Karim Benzerara , Elodie Muller , Paola Bertolino Environmental Microbiology Reports, 2021, 13 (5), pp.600-605. ⟨10.1111/1758-2229.12957⟩ Article dans une revue hal-03384295v1
	Phylogenomics of a new fungal phylum reveals multiple waves of reductive evolution across Holomycota Luis Javier Galindo , Purificación López-García , Guifré Torruella , Sergey Karpov , David Moreira Nature Communications, 2021, 12 (1), pp.4973. ⟨10.1038/s41467-021-25308-w⟩ Article dans une revue hal-03383509v1
	Small freshwater ecosystems with dissimilar microbial communities exhibit similar temporal patterns Gwendoline David , Purificación López‐garcía , David Moreira , Benjamin Alric , Philippe Deschamps Molecular Ecology, 2021, 30 (9), pp.2162-2177. ⟨10.1111/mec.15864⟩ Article dans une revue hal-03327969v1
	Core microbial communities of lacustrine microbialites sampled along an alkalinity gradient Miguel Iniesto , David Moreira , Guillaume Reboul , Philippe Deschamps , Karim Benzerara Environmental Microbiology, 2021, 23, pp.51-68. ⟨10.1111/1462-2920.15252⟩ Article dans une revue hal-02988545v1
	Environmental drivers of plankton protist communities along latitudinal and vertical gradients in the oldest and deepest freshwater lake Gwendoline M David , David Moreira , Guillaume Reboul , Nataliia V Annenkova , Luis J Galindo Environmental Microbiology, 2021, 23 (3), pp.1436-1451. ⟨10.1111/1462-2920.15346⟩ Article dans une revue hal-03043428v1
	Integrative analysis of the mineralogical and chemical composition of modern microbialites from ten Mexican lakes: What do we learn about their formation? Nina Zeyen , Karim Benzerara , Olivier Beyssac , Damien Daval , Elodie Muller Geochimica et Cosmochimica Acta, 2021, 305, pp.148-184. ⟨10.1016/j.gca.2021.04.030⟩ Article dans une revue hal-03273216v1
	Marine signature taxa and core microbial community stability along latitudinal and vertical gradients in sediments of the deepest freshwater lake Guillaume Reboul , David Moreira , Nataliia V Annenkova , Paola Bertolino , Konstantin E Vershinin The International Society of Microbiologial Ecology Journal, 2021, 15, pp.3412-3417. ⟨10.1038/s41396-021-01011-y⟩ Article dans une revue hal-03384282v1
	A novel microbialite-associated phototrophic Chloroflexi lineage exhibiting a quasi-clonal pattern along Depth Aurélien Saghaï , Yvan Zivanovic , David Moreira , Rosaluz Tavera , Purificación López-García Genome Biology and Evolution, 2020, 12 (7), pp.1207 - 1216. ⟨10.1093/gbe/evaa122⟩ Article dans une revue hal-03003320v1
	Cultured Asgard Archaea Shed Light on Eukaryogenesis Purificación López-García , David Moreira Cell, 2020, 181 (2), pp.232-235. ⟨10.1016/j.cell.2020.03.058⟩ Article dans une revue hal-02988522v1
	Performance of the melting seawater‐ice elution method on the metabarcoding characterization of benthic protist communities Albert Reñé , Adrià Auladell , Guillaume Reboul , David Moreira , Purificación López-García Environmental Microbiology Reports, 2020, 12 (3), pp.314-323. ⟨10.1111/1758-2229.12834⟩ Article dans une revue hal-02988536v1
	Morphology and molecular phylogeny of Aphelidium insulamus sp. nov. (Aphelida, Opisthosporidia) Sergey A. Karpov , Andrey Vishnyakov , Purificación López-García , Natalia Zorina , Maria Ciobanu Protistology, 2020, 14 (4), pp.191-203. ⟨10.21685/1680-0826-2020-14-4-3⟩ Article dans une revue hal-03043373v1
	Origin and Evolution of the Halo-Volcanic Complex of Dallol: Proto-Volcanism in Northern Afar (Ethiopia) José López-García , David Moreira , Karim Benzerara , Olivier Grunewald , Purificación López-García Frontiers in Earth Science, 2020, 7, ⟨10.3389/feart.2019.00351⟩ Article dans une revue hal-02988490v1
	The Syntrophy hypothesis for the origin of eukaryotes revisited Purificación López-García , David Moreira Nature Microbiology, 2020, 5 (5), pp.655-667. ⟨10.1038/s41564-020-0710-4⟩ Article dans une revue hal-02988531v1
	Time series are critical to understand microbial plankton diversity and ecology David Moreira , Purificacion Lopez-Garcia Molecular Ecology, 2019, 28 (5), pp.920-922. ⟨10.1111/mec.15015⟩ Article dans une revue hal-02110406v1
	Combined cultivation and single-cell approaches to the phylogenomics of nucleariid amoebae, close relatives of fungi Luis Javier Galindo , Guifré Torruella , David Moreira , Yana Eglit , Alastair Simpson Philosophical Transactions of the Royal Society B: Biological Sciences, 2019, 374 (1786), pp.20190094. ⟨10.1098/rstb.2019.0094⟩ Article dans une revue hal-02988477v1
	Horizontal and endosymbiotic gene transfer in early plastid evolution Rafael Isaac Ponce Toledo , Purificacion Lopez-Garcia , David Moreira New Phytologist, 2019, ⟨10.1111/nph.15965⟩ Article dans une revue hal-02365884v1
	Combined cultivation and single-cell approaches to the phylogenomics of nucleariid amoebae, close relatives of fungi Luis Javier Galindo , Guifré Torruella , David Moreira , Yana Eglit , Alastair Simpson Philosophical Transactions of the Royal Society B: Biological Sciences, 2019, 374 (1786), pp.20190094. ⟨10.1098/rstb.2019.0094⟩ Article dans une revue hal-03035936v1
	The Ultrastructure of Sanchytrium tribonematis (Sanchytriaceae, Fungi incertae sedis) Confirms its Close Relationship to Amoeboradix Sergey Karpov , Andrey E Vishnyakov , David Moreira , Purificacion Lopez-Garcia Journal of Eukaryotic Microbiology, 2019, ⟨10.1111/jeu.12740⟩ Article dans une revue hal-02365842v1
	Ancient Adaptive Lateral Gene Transfers in the Symbiotic Opalina - Blastocystis Stramenopile Lineage Naoji Yubuki , Luis Xavier Galindo , Guillaume Reboul , Purificacion Lopez-Garcia , Matthew W Brown Molecular Biology and Evolution, 2019, 37, pp.651-659. ⟨10.1093/molbev/msz250⟩ Article dans une revue hal-02367918v1
	New member of Gromochytriales (Chytridiomycetes) - Apiochytrium granulosporum nov. gen. et sp Sergey A Karpov , David Moreira , Maria A Mamkaeva , Olga V Popova , Vladimir V Aleoshine Journal of Eukaryotic Microbiology, 2019, 66 (4), pp.582-591. ⟨10.1111/jeu.12702⟩ Article dans une revue hal-02108862v1
	Hyperdiverse archaea near life limits at the polyextreme geothermal Dallol area Jodie Belilla , David Moreira , Ludwig Jardillier , Guillaume Reboul , Karim Benzerara Nature Ecology & Evolution, 2019, 3 (11), pp.1552-1561. ⟨10.1038/s41559-019-1005-0⟩ Article dans une revue hal-02367946v1
	Fe-bearing phases in modern lacustrine microbialites from Mexico Nina Zeyen , Karim Benzerara , Nicolas Menguy , Jessica Brest , Alexis Templeton Geochimica et Cosmochimica Acta, 2019, 253, pp.201-230. ⟨10.1016/j.gca.2019.03.021⟩ Article dans une revue hal-02124836v1
	Eukaryogenesis, a syntrophy affair Purificación López-García , David Moreira Nature Microbiology, 2019, 4 (7), pp.1068-1070. ⟨10.1038/s41564-019-0495-5⟩ Article dans une revue hal-02368063v1
	Global transcriptome analysis of the aphelid Paraphelidium tribonemae supports the phagotrophic origin of fungi Guifré Torruella , Xavier Grau-Bové , David Moreira , Sergey Karpov , John Burns Communications Biology, 2018, 1 (1), ⟨10.1038/s42003-018-0235-z⟩ Article dans une revue hal-02108878v1
	Evolutionary Genomics of Metchnikovella incurvata (Metchnikovellidae): An Early Branching Microsporidium Luis Javier Galindo , Guifré Torruella , David Moreira , Hélène Timpano , Gita Paskerova Genome Biology and Evolution, 2018, 10 (10), pp.2736-2748. ⟨10.1093/gbe/evy205⟩ Article dans une revue hal-02109065v1
	Microbial eukaryotes in the suboxic chemosynthetic ecosystem of Movile Cave, Romania Guillaume Reboul , David Moreira , Paola Bertolino , Alexandra Maria Hillebrand-Voiculescu , Purificación López-García Environmental Microbiology Reports, 2018, 11 (3), pp.464-473. ⟨10.1111/1758-2229.12756⟩ Article dans une revue hal-02369191v1
	Cyanobacterial formation of intracellular Ca-carbonates in undersaturated solutions Nithavong Cam , Karim Benzerara , Thomas Georgelin , Maguy Jaber , Jean-François Lambert Geobiology, 2018, 16 (1), pp.49-61. ⟨10.1111/gbi.12261⟩ Article dans une revue hal-01655173v1
	Functional shifts in microbial mats recapitulate early Earth metabolic transitions Ana Gutiérrez-Preciado , Aurélien Saghaï , David Moreira , Yvan Zivanovic , Philippe Deschamps Nature Ecology & Evolution, 2018, 2 (11), pp.1700-1708. ⟨10.1038/s41559-018-0683-3⟩ Article dans une revue hal-02996248v1
	The Chytrid-like Parasites of Algae Amoeboradix gromovi gen. et sp. nov. and Sanchytrium tribonematis Belong to a New Fungal Lineage Sergey Karpov , Purificacion Lopez-Garcia , Maria Mamkaeva , Vladimir Klimov , Andrey Vishnyakov Protist, 2018, 169 (1), pp.122-140. ⟨10.1016/j.protis.2017.11.002⟩ Article dans une revue hal-02109182v1
	Secondary Plastids of Euglenids and Chlorarachniophytes Function with a Mix of Genes of Red and Green Algal Ancestry Rafael I Ponce-Toledo , David Moreira , Purificacion Lopez-Garcia , Philippe Deschamps Molecular Biology and Evolution, 2018, 35 (9), pp.2198-2204. ⟨10.1093/molbev/msy121⟩ Article dans une revue hal-02108901v1
	Parvularia atlantis gen. et sp. nov., a Nucleariid Filose Amoeba (Holomycota, Opisthokonta) David López-Escardó , Purificacion Lopez-Garcia , David Moreira , Iñaki Ruiz-Trillo , Guifré Torruella Journal of Eukaryotic Microbiology, 2018, 65 (2), pp.170-179. ⟨10.1111/jeu.12450⟩ Article dans une revue hal-02109097v1
	Description of Gloeomargarita lithophora gen. nov., sp. nov., a thylakoid-bearing, basal-branching cyanobacterium with intracellular carbonates, and proposal for Gloeomargaritales ord. nov. David Moreira , Rosaluz Tavera , Karim Benzerara , Fériel Skouri-Panet , Estelle Couradeau International Journal of Systematic and Evolutionary Microbiology, 2017, 67 (3), pp.653-658. ⟨10.1099/ijsem.0.001679⟩ Article dans une revue hal-01741639v1
	Geochemical Conditions Allowing the Formation of Modern Lacustrine Microbialites Nina Zeyen , Damien Daval , Purification Lopez-Garcia , David Moreira , Jerôme Gaillardet Procedia Earth and Planetary Science, 2017, 17, pp.380 - 383. ⟨10.1016/j.proeps.2016.12.096⟩ Article dans une revue hal-01440538v1
	An Early-Branching Freshwater Cyanobacterium at the Origin of Plastids Rafael I Ponce-Toledo , Philippe Deschamps , Purificación López-García , Yvan Zivanovic , Karim Benzerara Current Biology - CB, 2017, 27 (3), pp.386-391. ⟨10.1016/j.cub.2016.11.056⟩ Article dans une revue hal-01741643v1
	Comparative metagenomics unveils functions and genome features of microbialite-associated communities along a depth gradient Aurélien Saghaï , Yvan Zivanovic , David Moreira , Karim Benzerara , Paola Bertolino Environmental Microbiology, 2016, 18 (12), pp.4990-5004. ⟨10.1111/1462-2920.13456⟩ Article dans une revue hal-01412335v1
	Resilience of Freshwater Communities of Small Microbial Eukaryotes Undergoing Severe Drought Events Marianne Simon , Purificación López-García , Philippe Deschamps , Gwendal Restoux , Paola Bertolino Frontiers in Microbiology, 2016, 7, pp.812. ⟨10.3389/fmicb.2016.00812⟩ Article dans une revue hal-01587905v1
	Involvement of microbial mats in early fossilization by decay delay and formation of impressions and replicas of vertebrates and invertebrates Miguel Iniesto , Ángela D. Buscalioni , M. Carmen Guerrero , Karim Benzerara , David Moreira Scientific Reports, 2016, 6, pp.25716. ⟨10.1038/srep25716⟩ Article dans une revue hal-01319247v1
	Biomineralization Patterns of Intracellular Carbonatogenesis in Cyanobacteria: Molecular Hypotheses Jinhua Li , Isabel Margaret-Oliver , Nithavong Cam , Thomas Boudier , Marine Blondeau Minerals, 2016, 6 (1), pp.10. ⟨10.3390/min6010010⟩ Article dans une revue hal-01310553v1
	Bacterial gene import and mesophilic adaptation in archaea Purificación López-García , Yvan Zivanovic , Philippe Deschamps , David Moreira Nature Reviews Microbiology, 2015, 13 (7), pp.447 - 456. ⟨10.1038/nrmicro3485⟩ Article dans une revue hal-01438307v1
	Marked seasonality and high spatial variability of protist communities in shallow freshwater systems Marianne Simon , Purificación López-García , Philippe Deschamps , David Moreira , Gwendal Restoux The International Society of Microbiologial Ecology Journal, 2015, 9 (9), pp.1941-1953. ⟨10.1038/ISMEJ.2015.6⟩ Article dans une revue hal-03022559v1
	Metagenome-based diversity analyses suggest a significant contribution of non-cyanobacterial lineages to carbonate precipitation in modern microbialites Aurélien Saghaï , Yvan Zivanovic , Nina Zeyen , David Moreira , Karim Benzerara Frontiers in Microbiology, 2015, 6, pp.797. ⟨10.3389/fmicb.2015.00797⟩ Article dans une revue hal-01221204v1
	Formation of low-T hydrated silicates in modern microbialites from Mexico and implications for microbial fossilization Nina Zeyen , Karim Benzerara , Jinhua Li , Alexis Groleau , Etienne Balan Frontiers in Earth Science, 2015, 3, pp.64. ⟨10.3389/feart.2015.00064⟩ Article dans une revue hal-01226254v1
	Complex communities of small protists and unexpected occurrence of typical marine lineages in shallow freshwater systems Marianne Simon , Ludwig Jardillier , Philippe Deschamps , David Moreira , Gwendal Restoux Environmental Microbiology, 2015, 17 (10), pp.3610-3627. ⟨10.1111/1462-2920.12591⟩ Article dans une revue hal-03022575v1
	Intracellular Ca-carbonate biomineralization is widespread in cyanobacteria. Karim Benzerara , Feriel Skouri-Panet , Jinhua Li , Céline Férard , Muriel Gugger Proceedings of the National Academy of Sciences of the United States of America, 2014, 111 (30), pp.10933-8. ⟨10.1073/pnas.1403510111⟩ Article dans une revue hal-01101603v1
	16S rDNA-based analysis reveals cosmopolitan occurrence but limited diversity of two cyanobacterial lineages with contrasted patterns of intracellular carbonate mineralization Marie Ragon , Karim Benzerara , David Moreira , Rosaluz Tavera , Purificación López-García Frontiers in Microbiology, 2014, 5, pp.331. ⟨10.3389/fmicb.2014.00331⟩ Article dans une revue hal-01321248v1
	Molecular PhylogenyandUltrastructure of Aphelidium aff.melosirae (Aphelida, Opisthosporidia) Sergey A. Karpov , Maria A. Mamkaeva , Karim Benzerara , David Moreira , Purificación López-García Protist, 2014, 165, pp.512-526. ⟨10.1016/j.protis.2014.05.003⟩ Article dans une revue hal-01049981v1
	Seasonal dynamics of free-living tintinnid ciliate communities revealed by environmental sequences from the North-West Mediterranean Sea Charles Bachy , David Moreira , John R. Dolan , Purificación López-García FEMS Microbiology Ecology, 2014, 87 (2), pp.330-342. ⟨10.1111/1574-6941.12224⟩ Article dans une revue hal-03502774v1
	Accuracy of protist diversity assessments: morphology compared with cloning and direct pyrosequencing of 18S rRNA genes and ITS regions using the conspicuous tintinnid ciliates as a case study Charles Bachy , John R. Dolan , Purificación López-García , Philippe Deschamps , David Moreira The International Society of Microbiologial Ecology Journal, 2013, 7 (2), pp.244-255. ⟨10.1038/ismej.2012.106⟩ Article dans une revue hal-03502641v1
	An Early-Branching Microbialite Cyanobacterium Forms Intracellular Carbonates Estelle Couradeau , Karim Benzerara , Emmanuelle Gérard , David Moreira , Sylvain Bernard Science, 2012, 336, pp.459. ⟨10.1126/science.1216171⟩ Article dans une revue insu-03583352v1
	Molecular phylogeny of the marine dinoflagellate genus Heterodinium (Dinophyceae) Fernando Gomez , Purificación López-García , John R. Dolan , David Moreira Journal of Phycology, 2012, 47 (2), pp.95-104. ⟨10.1080/09670262.2012.662722⟩ Article dans une revue hal-03502685v1
	Molecular Phylogeny of Tintinnid Ciliates (Tintinnida, Ciliophora) Charles Bachy , Fernando Gomez , Purificación López-García , John R. Dolan , David Moreira Protist, 2012, 163 (6), pp.873-887. ⟨10.1016/j.protis.2012.01.001⟩ Article dans une revue hal-03502657v1
	Prokaryotic and Eukaryotic Community Structure in Field and Cultured Microbialites from the Alkaline Lake Alchichica (Mexico) Estelle Couradeau , Karim Benzerara , David Moreira , Emmanuelle Gerard , Jozef Kazmierczak PLoS ONE, 2012, 6 (12), pp.e28767. ⟨10.1371/journal.pone.0028767⟩ Article dans une revue hal-00677228v1
	Complete-fosmid and fosmid-end sequences reveal frequent horizontal gene transfers in marine uncultured planktonic archaea. Céline Brochier-Armanet , Philippe Deschamps , Purificación López-García , Yvan Zivanovic , Francisco Rodríguez-Valera The International Society of Microbiologial Ecology Journal, 2011, 5 (8), pp.1291-302. ⟨10.1038/ismej.2011.16⟩ Article dans une revue hal-00662567v1
	Sunlight-Exposed Biofilm Microbial Communities Are Naturally Resistant to Chernobyl Ionizing-Radiation Levels Marie Ragon , Gwendal Restoux , David Moreira , Anders Pape Møller , Purificación López-García PLoS ONE, 2011, ⟨10.1371/journal.pone.0021764⟩ Article dans une revue hal-03021697v1
	Comparative metagenomics of bathypelagic plankton and bottom sediment from the Sea of Marmara Achim Quaiser , Yvan Zivanovic , David Moreira , Purificación López-García The International Society of Microbiologial Ecology Journal, 2011, 5 (2), pp.285-304. ⟨10.1038/ismej.2010.113⟩ Article dans une revue hal-00561029v1
	Molecular phylogeny of the dinoflagellates Podolampas and Blepharocysta (Peridiniales, Dinophyceae) Fernando Gomez , David Moreira , Purificación López-García Phycologia, 2010, 49 (3), pp.212-220. ⟨10.2216/PH09-29.1⟩ Article dans une revue hal-03502069v1
	Molecular Phylogeny of Noctilucoid Dinoflagellates (Noctilucales, Dinophyceae) Fernando Gomez , David Moreira , Purificación López-García Protist, 2010, 161 (3), pp.466-478. ⟨10.1016/j.protis.2009.12.005⟩ Article dans une revue hal-03502065v1
	A Complex Cell Division Machinery Was Present in the Last Common Ancestor of Eukaryotes Laura Eme , David Moreira , Emmanuel Talla , Céline Brochier-Armanet PLoS ONE, 2009, 4 (4), pp.e5021. ⟨10.1371/journal.pone.0005021⟩ Article dans une revue hal-03368340v1
	Metabolic Symbiosis and the Birth of the Plant Kingdom. Philippe Deschamps , Christophe Colleoni , Yasunori Nakamura , Eiji Suzuki , Jean-Luc Putaux Molecular Biology and Evolution, 2007, 25 (3), epub ahead of print. ⟨10.1093/molbev/msm280⟩ Article dans une revue hal-00250123v1
	Thermophilic lifestyle for an uncultured archaeon from hydrothermal vents: evidence from environmental genomics Hélène Moussard , Ghislaine Henneke , David Moreira , Vincent Jouffe , Purificación López-García Applied and Environmental Microbiology, 2006, 72 (3), pp.2268-2271. ⟨10.1128/AEM.72.3.2268-2271.2006⟩ Article dans une revue hal-00617096v1
	Prebiotic Chemistry – Biochemistry – Emergence of Life (4.4–2 Ga) Robert Pascal , Laurent Boiteau , Patrick Forterre , M. Gargaud , Antonio Lazcano Earth, Moon, and Planets, 2006, 98, pp.153-203. ⟨10.1007/s11038-006-9089-3⟩ Article dans une revue hal-00112041v1
	Uncultured Archaea in a hydrothermal microbial assemblage: phylogenetic diversity and characterization of a genome fragment from a euryarchaeote Hélène Moussard , David Moreira , Marie-Anne Cambon-Bonavita , Purificación López-García , Christian Jeanthon FEMS Microbiology Ecology, 2006, 57 (3), pp.452-469. ⟨10.1111/j.1574-6941.2006.00128.x⟩ Article dans une revue hal-00617104v1
	Microbial diversity on the Tatahouine meteorite Karim Benzerara , Virginie Chapon , David Moreira , Purificación López-García , François Guyot Meteoritics and Planetary Science, 2006, 41 (8), pp.1249-1265. ⟨10.1111/j.1945-5100.2006.tb00519.x⟩ Article dans une revue hal-01560924v1
	Bacterial diversity and carbonate precipitation in the giant microbialites from the highly alkaline Lake Van, Turkey. Purificación López-García , Józef Kazmierczak , Karim Benzerara , Stephan Kempe , François Guyot Extremophiles, 2005, 9, pp.263-274. ⟨10.1007/s00792-005-0457-0⟩ Article dans une revue hal-00021666v1
	Eubacterial phylogeny based on translational apparatus proteins Céline Brochier , Eric Bapteste , David Moreira , Hervé Philippe Trends in Genetics, 2002, 18 (1), pp.1-5. ⟨10.1016/s0168-9525(01)02522-7⟩ Article dans une revue hal-02335701v1
	The new phylogeny of eukaryotes. Heinui Philippe , Agnès Germot , David Moreira Current Opinion in Genetics and Development, 2000, 10, pp.596-601 Article dans une revue hal-02694637v1
	Early branching or fast evolving eukaryotes? An answer based on slowly evolving positions. Heinui Philippe , P. Lopez , H. Brinkmann , K. Budin , Agnès Germot Philosophical Transactions of the Royal Society B: Biological Sciences, 2000, 267, pp.1213-1221 Article dans une revue hal-02689056v1
	The evolutionary history of ribosomal protein RpS14: horizontal gene transfer at the heart of the ribosome Céline Brochier , Hervé Philippe , David Moreira Trends in Genetics, 2000, 16 (12), pp.529-533. ⟨10.1016/s0168-9525(00)02142-9⟩ Article dans une revue hal-02335661v1

David Moreira Fernandez

Publications

Widespread formation of intracellular calcium carbonates by the bloom‐forming cyanobacterium Microcystis

Molecular and morphological characterization of four new ancyromonad genera and proposal for an updated taxonomy of the Ancyromonadida

Maturases and Group II Introns in the Mitochondrial Genomes of the Deepest Jakobid Branch

Morphological and molecular characterization of a new member of the phylum Rhodelphidia

Phylogenomics Supports the Monophyly of Aphelids and Fungi and Identifies New Molecular Synapomorphies

Planktonic microbial communities from microbialite‐bearing lakes sampled along a salinity‐alkalinity gradient

Independent Size Expansions and Intron Proliferation in Red Algal Plastid and Mitochondrial Genomes

Site-and-branch-heterogeneous analyses of an expanded dataset favour mitochondria as sister to known Alphaproteobacteria

A phylogenetic and proteomic reconstruction of eukaryotic chromatin evolution

Expanding the molecular and morphological diversity of Apusomonadida, a deep‐branching group of gliding bacterivorous protists

A New Gene Family Diagnostic for Intracellular Biomineralization of Amorphous Ca Carbonates by Cyanobacteria

Physical connections: prokaryotes parasitizing their kin

Reductive evolution and unique predatory mode in the CPR bacterium Vampirococcus lugosii

Archaeal overdominance close to life-limiting conditions in geothermally influenced hypersaline lakes at the Danakil Depression, Ethiopia

Rapid formation of mature microbialites in Lake Alchichica, Mexico

Phylogenomics of a new fungal phylum reveals multiple waves of reductive evolution across Holomycota

Small freshwater ecosystems with dissimilar microbial communities exhibit similar temporal patterns

Core microbial communities of lacustrine microbialites sampled along an alkalinity gradient

Environmental drivers of plankton protist communities along latitudinal and vertical gradients in the oldest and deepest freshwater lake

Integrative analysis of the mineralogical and chemical composition of modern microbialites from ten Mexican lakes: What do we learn about their formation?

Marine signature taxa and core microbial community stability along latitudinal and vertical gradients in sediments of the deepest freshwater lake

A novel microbialite-associated phototrophic Chloroflexi lineage exhibiting a quasi-clonal pattern along Depth

Cultured Asgard Archaea Shed Light on Eukaryogenesis

Performance of the melting seawater‐ice elution method on the metabarcoding characterization of benthic protist communities

Morphology and molecular phylogeny of Aphelidium insulamus sp. nov. (Aphelida, Opisthosporidia)

Origin and Evolution of the Halo-Volcanic Complex of Dallol: Proto-Volcanism in Northern Afar (Ethiopia)

The Syntrophy hypothesis for the origin of eukaryotes revisited

Time series are critical to understand microbial plankton diversity and ecology

Combined cultivation and single-cell approaches to the phylogenomics of nucleariid amoebae, close relatives of fungi

Horizontal and endosymbiotic gene transfer in early plastid evolution

Combined cultivation and single-cell approaches to the phylogenomics of nucleariid amoebae, close relatives of fungi

The Ultrastructure of Sanchytrium tribonematis (Sanchytriaceae, Fungi incertae sedis) Confirms its Close Relationship to Amoeboradix

Ancient Adaptive Lateral Gene Transfers in the Symbiotic Opalina - Blastocystis Stramenopile Lineage

New member of Gromochytriales (Chytridiomycetes) - Apiochytrium granulosporum nov. gen. et sp

Hyperdiverse archaea near life limits at the polyextreme geothermal Dallol area

Fe-bearing phases in modern lacustrine microbialites from Mexico

Eukaryogenesis, a syntrophy affair

Global transcriptome analysis of the aphelid Paraphelidium tribonemae supports the phagotrophic origin of fungi

Evolutionary Genomics of Metchnikovella incurvata (Metchnikovellidae): An Early Branching Microsporidium

Microbial eukaryotes in the suboxic chemosynthetic ecosystem of Movile Cave, Romania

Cyanobacterial formation of intracellular Ca-carbonates in undersaturated solutions

Functional shifts in microbial mats recapitulate early Earth metabolic transitions

The Chytrid-like Parasites of Algae Amoeboradix gromovi gen. et sp. nov. and Sanchytrium tribonematis Belong to a New Fungal Lineage

Secondary Plastids of Euglenids and Chlorarachniophytes Function with a Mix of Genes of Red and Green Algal Ancestry

Parvularia atlantis gen. et sp. nov., a Nucleariid Filose Amoeba (Holomycota, Opisthokonta)

Description of Gloeomargarita lithophora gen. nov., sp. nov., a thylakoid-bearing, basal-branching cyanobacterium with intracellular carbonates, and proposal for Gloeomargaritales ord. nov.

Geochemical Conditions Allowing the Formation of Modern Lacustrine Microbialites

An Early-Branching Freshwater Cyanobacterium at the Origin of Plastids

Comparative metagenomics unveils functions and genome features of microbialite-associated communities along a depth gradient

Resilience of Freshwater Communities of Small Microbial Eukaryotes Undergoing Severe Drought Events

Involvement of microbial mats in early fossilization by decay delay and formation of impressions and replicas of vertebrates and invertebrates

Biomineralization Patterns of Intracellular Carbonatogenesis in Cyanobacteria: Molecular Hypotheses

Bacterial gene import and mesophilic adaptation in archaea

Marked seasonality and high spatial variability of protist communities in shallow freshwater systems

Metagenome-based diversity analyses suggest a significant contribution of non-cyanobacterial lineages to carbonate precipitation in modern microbialites

Formation of low-T hydrated silicates in modern microbialites from Mexico and implications for microbial fossilization

Complex communities of small protists and unexpected occurrence of typical marine lineages in shallow freshwater systems

Intracellular Ca-carbonate biomineralization is widespread in cyanobacteria.

16S rDNA-based analysis reveals cosmopolitan occurrence but limited diversity of two cyanobacterial lineages with contrasted patterns of intracellular carbonate mineralization

Molecular PhylogenyandUltrastructure of Aphelidium aff.melosirae (Aphelida, Opisthosporidia)

Seasonal dynamics of free-living tintinnid ciliate communities revealed by environmental sequences from the North-West Mediterranean Sea

Accuracy of protist diversity assessments: morphology compared with cloning and direct pyrosequencing of 18S rRNA genes and ITS regions using the conspicuous tintinnid ciliates as a case study

An Early-Branching Microbialite Cyanobacterium Forms Intracellular Carbonates

Molecular phylogeny of the marine dinoflagellate genus Heterodinium (Dinophyceae)

Molecular Phylogeny of Tintinnid Ciliates (Tintinnida, Ciliophora)

Prokaryotic and Eukaryotic Community Structure in Field and Cultured Microbialites from the Alkaline Lake Alchichica (Mexico)

Complete-fosmid and fosmid-end sequences reveal frequent horizontal gene transfers in marine uncultured planktonic archaea.

Sunlight-Exposed Biofilm Microbial Communities Are Naturally Resistant to Chernobyl Ionizing-Radiation Levels

Comparative metagenomics of bathypelagic plankton and bottom sediment from the Sea of Marmara

Molecular phylogeny of the dinoflagellates Podolampas and Blepharocysta (Peridiniales, Dinophyceae)

Molecular Phylogeny of Noctilucoid Dinoflagellates (Noctilucales, Dinophyceae)

A Complex Cell Division Machinery Was Present in the Last Common Ancestor of Eukaryotes

Metabolic Symbiosis and the Birth of the Plant Kingdom.

Thermophilic lifestyle for an uncultured archaeon from hydrothermal vents: evidence from environmental genomics

Prebiotic Chemistry – Biochemistry – Emergence of Life (4.4–2 Ga)

Uncultured Archaea in a hydrothermal microbial assemblage: phylogenetic diversity and characterization of a genome fragment from a euryarchaeote

Microbial diversity on the Tatahouine meteorite

Bacterial diversity and carbonate precipitation in the giant microbialites from the highly alkaline Lake Van, Turkey.