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Functional beta diversity of New Zealand fishes: Characterising morphological turnover along depth and latitude gradients, with derivation of functional bioregions

Elisabeth Myers , David Eme , Libby Liggins , Euan Harvey , Clive Roberts , et al.
Austral Ecology, 2021, 46 (6), pp.965-981. ⟨10.1111/aec.13078⟩
Article dans une revue hal-03616055v1

High functional diversity in deep‐sea fish communities and increasing intraspecific trait variation with increasing latitude

Elisabeth Myers , Marti Anderson , Libby Liggins , Euan Harvey , Clive Roberts , et al.
Ecology and Evolution, 2021, 11 (15), pp.10600-10612. ⟨10.1002/ece3.7871⟩
Article dans une revue hal-03616057v1
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Approches macro-écologique et phylogéographique pour démêler facteurs et processus responsables des patrons de biodiversité aquatique souterraine en Europe

David Eme
Biodiversité. Université Claude Bernard - Lyon I, 2014. Français. ⟨NNT : 2014LYO10134⟩
Thèse tel-01203349v1

Do cryptic species matter in macroecology? Sequencing European groundwater crustaceans yields smaller ranges but does not challenge biodiversity determinants

David Eme , Maja Zagmajster , Teo Delić , Cene Fišer , Jean-François Flot , et al.
Ecography, 2018, 41 (2), pp.424 - 436. ⟨10.1111/ecog.02683⟩
Article dans une revue hal-01731403v1

An integrated pathway for building regional phylogenies for ecological studies

David Eme , Marti Anderson , Carl Struthers , Clive Roberts , Libby Liggins
Global Ecology and Biogeography, 2019, 28 (12), pp.1899-1911. ⟨10.1111/geb.12986⟩
Article dans une revue hal-03616047v1
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Phylogenetic measures reveal eco‐evolutionary drivers of biodiversity along a depth gradient

David Eme , M. Anderson , E. Myers , C. Roberts , L. Liggins
Ecography, 2020, 43 (5), pp.689-702. ⟨10.1111/ecog.04836⟩
Article dans une revue hal-03616036v1

Multi-causality and spatial non-stationarity in the determinants of groundwater crustacean diversity in Europe

David Eme , Maja Zagmajster , Cene Fiser , Diana M.P. Galassi , Pierre Marmonier , et al.
Ecography, 2015, 38, pp.531-540. ⟨10.1111/ecog.01092⟩
Article dans une revue istex hal-01323920v1

GOTIT: A laboratory application software for optimizing multi‐criteria species‐based research

Florian Malard , Philippe Grison , Louis Duchemin , Lara Konecny-Dupré , Tristan Lefébure , et al.
Methods in Ecology and Evolution, 2020, 11, pp.159-167. ⟨10.1111/2041-210X.13307⟩
Article dans une revue hal-02329439v1

Robust identification of potential habitats of a rare demersal species (blackspot seabream) in the Northeast Atlantic

Lola de Cubber , Verena Trenkel , Guzman Diez , Juan Gil-Herrera , Ana Maria Novoa Pabon , et al.
Ecological Modelling, 2023, 477, pp.110255. ⟨10.1016/j.ecolmodel.2022.110255⟩
Article dans une revue hal-04028923v1
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Environmental DNA complements scientific trawling in surveys of marine fish biodiversity

Pierre Veron , Romane Rozanski , Virginie Marques , Stéphane Joost , Marie Emilie Deschez , et al.
ICES Journal of Marine Science, 2023, 80 (8), pp.2150-2165. ⟨10.1093/icesjms/fsad139⟩
Article dans une revue hal-04313486v1
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Comparing environmental DNA metabarcoding and underwater visual census to monitor tropical reef fishes

Andrea Polanco Fernández , Virginie Marques , Fabian Fopp , Jean‐baptiste Juhel , Giomar Helena Borrero-Pérez , et al.
Environmental DNA, 2021, 3 (1), pp.142-156. ⟨10.1002/edn3.140⟩
Article dans une revue hal-03810224v1
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Ecology-based evaluation of groundwater ecosystems under intensive agriculture: A combination of community analysis and sentinel exposure

Pierre Marmonier , Chafik Maazouzi , Nicole Baran , Simon Blanchet , Amy Ritter , et al.
Science of the Total Environment, 2018, 613-614, pp.1353-1366. ⟨10.1016/j.scitotenv.2017.09.191⟩
Article dans une revue hal-01637292v1
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A multispecies, intraspecific functional traits data set on fish species from the Bay of Biscay, France

Romane Rozanski , David Eme , Anne Boiron Leroy , Marta M Rufino , Camille Albouy
Ecology, 2023, pp.e3924. ⟨10.1002/ecy.3924⟩
Article dans une revue hal-03946746v1
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Contrasting Phylogeographic Patterns of Mitochondrial and Genome-Wide Variation in the Groundwater Amphipod Crangonyx islandicus That Survived the Ice Age in Iceland

David Eme , Kristen M Westfall , Brynja Matthíasardóttir , Bjarni Kristófer Kristjánsson , Snæbjörn Pálsson
Diversity, 2023, 15 (1), pp.88. ⟨10.3390/d15010088⟩
Article dans une revue hal-03946769v1
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Contrasted spatio-temporal changes in the demersal fish assemblages and the dominance of the environment vs fishing pressure, in the Bay of Biscay and Celtic Sea

David Eme , Marta M Rufino , Verena M Trenkel , Youen Vermard , Pascal Laffargue , et al.
Progress in Oceanography, 2022, 204, pp.102788. ⟨10.1016/j.pocean.2022.102788⟩
Article dans une revue hal-03810193v1

Geographic variation in range size and beta diversity of groundwater crustaceans: insights from habitats with low thermal seasonality

M. Zagmajster , David Eme , Cene Fiser , Diana M.P. Galassi , Pierre Marmonier , et al.
Global Ecology and Biogeography, 2014, 23 (10), pp.1135-1145. ⟨10.1111/Geb.12200⟩
Article dans une revue istex hal-01113188v1
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Disentangling the components of coastal fish biodiversity in southern Brittany by applying an environmental DNA approach

Romane Rozanski , Verena M. Trenkel , Pascal Lorance , Alice Valentini , Tony Dejean , et al.
Environmental DNA, 2023, 4 (4), pp.920-939. ⟨10.1002/edn3.305⟩
Article dans une revue hal-03946704v1

Integrating phylogeography, physiology, and habitat modelling to explore species range déterminants

David Eme , Florian Malard , Céline Colson-Proch , Pauline Jean , Sébastien Calvignac , et al.
Journal of Biogeography, 2014, 41, pp.687-699. ⟨10.1111/jbi.12237⟩
Article dans une revue istex halsde-00968144v1

Geomorphic influence on intraspecific genetic differentiation and diversity along hyporheic corridors

Florian Malard , Cécile Capderrey , Benjamin Churcheward , David Eme , Bernard Kaufmann , et al.
Freshwater Biology, 2017, 62 (12), pp.1955 - 1970. ⟨10.1111/fwb.13040⟩
Article dans une revue hal-01723507v1

Disentangling the effects of land use and geo-climatic factors on diversity in European freshwater ecosystems

Christian K. Feld , Sebastian Birk , David Eme , Michael Gerisch , Daniel Hering , et al.
Ecological Indicators, 2016, 60, pp.71 - 83. ⟨10.1016/j.ecolind.2015.06.024⟩
Article dans une revue hal-01714424v1

Spatiotemporal patterns of macroinvertebrate assemblages across mountain streams with contrasting thermal regimes

Luca Bonacina , David Eme , Riccardo Fornaroli , Nicolas Lamouroux , Sophie Cauvy-Fraunié
Freshwater Science, 2023, ⟨10.1086/728053⟩
Article dans une revue hal-04313613v1

A conservation roadmap for the subterranean biome

J. Judson Wynne , Francis Howarth , Stefano Mammola , Rodrigo Lopes Ferreira , Pedro Cardoso , et al.
Conservation Letters, 2021, 14 (5), ⟨10.1111/conl.12834⟩
Article dans une revue hal-03616068v1

A collaborative backbone resource for comparative studies of subterranean evolution: The World Asellidae database

Nathanaelle Saclier , Louis Duchemin , Lara Konecny-Dupré , Philippe Grison , David Eme , et al.
Molecular Ecology Resources, 2023, 24 (1), ⟨10.1111/1755-0998.13882⟩
Article dans une revue hal-04313500v1

Fundamental research questions in subterranean biology

Stefano Mammola , Isabel Amorim , Maria Bichuette , Paulo Borges , Naowarat Cheeptham , et al.
Biological Reviews, 2020, 95 (6), pp.1855-1872. ⟨10.1111/brv.12642⟩
Article dans une revue hal-03066110v1

Changes in key traits versus depth and latitude suggest energy‐efficient locomotion, opportunistic feeding and light lead to adaptive morphologies of marine fishes

Elisabeth Myers , Marti Anderson , David Eme , Libby Liggins , Clive Roberts
Journal of Animal Ecology, 2019, 89 (2), pp.309-322. ⟨10.1111/1365-2656.13131⟩
Article dans une revue hal-03616052v1

Brazilian cave heritage under siege

Rodrigo Lopes Ferreira , Enrico Bernard , Francisco William da Cruz Júnior , Luis Beethoven Piló , Allan Calux , et al.
Science, 2022, 375 (6586), pp.1238-1239. ⟨10.1126/science.abo1973⟩
Article dans une revue hal-03616075v1

The distribution of groundwater habitats in Europe

Jean-François Cornu , David Eme , Florian Malard
Hydrogeology Journal, 2013, 21 (5), pp.949-960. ⟨10.1007/s10040-013-0984-1⟩
Article dans une revue istex halsde-00870032v1
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Unique and shared effects of local and catchment predictors over distribution of hyporheic organisms: does the valley rule the stream?

Samuel Mouron , David Eme , Arnaud Bellec , Mélanie Bertrand , Stefano Mammola , et al.
Ecography, 2022, 2022 (5), pp.e06099. ⟨10.1111/ecog.06099⟩
Article dans une revue hal-03616026v1

Mitochondrial genomes reveal the extinct Hippidion as an outgroup to all living equids

Clio Der Sarkissian , Julia Vilstrup , Mikkel Schubert , Andaine Seguin-Orlando , David Eme , et al.
Biology Letters, 2015, 11 (20141058), pp.1-5. ⟨10.1098/rsbl.2014.1058⟩
Article dans une revue hal-01323150v1

Spatiotemporal patterns of macroinvertebrate assemblages across mountain streams with contrasting thermal regimes

Luca Bonacina , David Eme , Riccardo Fornaroli , Nicolas Lamouroux , Sophie Cauvy-Fraunié
Freshwater Science, 2023, 42 (4), pp.392-408. ⟨10.1086/728053⟩
Article dans une revue hal-04538481v1