Daniel Jacob

I am responsible for the design and/or adaptation of (bio)informatics tools facilitating the capture, storage and use of experimental data in the field of metabolomics and associated metadata. I am also responsible, through scientific monitoring of the field, for the development and/or adaptation of data processing methods (data processing & data mining), for the development and/or deployment of solutions allowing the exploration (data explorer), visualization (data visualization) and data accessibility (open data, FAIR).

30%

Libre accès

Documents

Affiliations actuelles

1002364
1157882
1091002

Identifiants chercheurs

daniel-jacob65
0000-0002-6687-7169
IdRef : 085566683

Présentation

Domaines de recherche

Compétences

Data mining Data management

Publications

stephane-bernillon

yves-gibon

	Multi-omics quantitative data of tomato fruit unveils regulation modes of least variable metabolites Annick Moing , Thierry Berton , Léa Roch , Salimata Diarrassouba , Stéphane Bernillon BMC Plant Biology, 2023, 23 (365), ⟨10.1186/s12870-023-04370-0⟩ Article dans une revue hal-04183193v1
	Predictive metabolomics of multiple Atacama plant species unveils a core set of generic metabolites for extreme climate resilience Thomas Dussarrat , Sylvain Prigent , Claudio Latorre , Stéphane Bernillon , Amélie Flandin New Phytologist, 2022, 234 (5), pp.1614-1628. ⟨10.1111/nph.18095⟩ Article dans une revue hal-03626433v1
	Maize metabolome and proteome responses to controlled cold stress partly mimic early‐sowing effects in the field and differ from those of Arabidopsis Maria Urrutia , Melisande Blein-Nicolas , Sylvain Prigent , Stéphane Bernillon , Catherine Deborde Plant, Cell and Environment, 2021, 44 (5), pp.1504-1521. ⟨10.1111/pce.13993⟩ Article dans une revue hal-03107184v1
	Metabolomic characterization of sunflower leaf allows discriminating genotype groups or stress levels with a minimal set of metabolic markers Olivier Fernandez , Maria Urrutia , Thierry Berton , Stéphane Bernillon , Catherine Deborde Metabolomics, 2019, 15 (4), pp.56. ⟨10.1007/s11306-019-1515-4⟩ Article dans une revue hal-02487236v1
	Metabotyping of 30 maize hybrids under early-sowing conditions reveals potential marker-metabolites for breeding Nadia Lamari , Vanessa Zhendre , Maria Urrutia , Stéphane Bernillon , Mickael Maucourt Metabolomics, 2018, 14 (10), pp.132. ⟨10.1007/s11306-018-1427-8⟩ Article dans une revue hal-02539641v1
	Metabolomic profiling in tomato reveals diel compositional changes in fruit affected by source-sink relationships. Camille Bénard , Stéphane Bernillon , Benoit Biais , Sonia Osorio , Mickael M. Maucourt Journal of Experimental Botany, 2015, 66 (11), pp.3391-404. ⟨10.1093/jxb/erv151⟩ Article dans une revue hal-02641303v1
	Deciphering genetic diversity and inheritance of tomato fruit weight and composition through a systems biology approach Laura Pascual-Banuls , Jiaxin Xu , Benoit Biais , Mickael Maucourt , Patricia Ballias Journal of Experimental Botany, 2013, 64 (18), pp.1-16. ⟨10.1093/jxb/ert349⟩ Article dans une revue hal-01208665v1

	Combining phenotypic, metabolome and proteome data to study maize response to a mild nitrogen deficit Maria Urrutia , Melisande Blein-Nicolas , Olivier Fernandez , Stéphane Bernillon , Mickael Maucourt Journées du Protéome Vert, Jun 2022, Gif-sur-Yette, France Communication dans un congrès hal-03878405v1
	Integrative and predictive biology outside the plant: linking computational tools to fleshy fruit systems Cecile Cabasson , Sophie Colombie , Bertrand Beauvoit , Christine Nazaret , Camille Benard Colloque Biologie synthétique et systémique, BioSynSys, Jun 2016, Bordeaux, France Communication dans un congrès hal-02739719v1
	Leaf marker metabolites for low nitrogen stress in maize Maria Urrutia Rosauro , Stéphane Bernillon , M. Maucourt , Catherine Deborde , Daniel Jacob Plant Biology Europe EPSO/FESPB 2016, Jun 2016, Prague, Czech Republic Communication dans un congrès hal-01605806v1
	Using developmental and diurnal compositional changes of tomato to study metabolism Camille Bénard , Stéphane Bernillon , Benoit Biais , Sonia Osorio-Algar , Mickael M. Maucourt 8. Journées Scientifiques du Réseau Français de Métabolomique et Fluxomique RFMF, May 2014, Lyon, France. 1 p Communication dans un congrès hal-02793195v1
	La métabolomique : un outil de la génomique fonctionnelle au service de la biologie des systèmes Dominique D. Rolin , Bertrand Beauvoit , Stéphane Bernillon , Camille Bénard , Patricia Ballias 8e Congrès Jeunes Chercheurs de la SFBV, Société Française de Biologie Végétale (SFBV). FRA., Jun 2014, Tours, France. 1 p Communication dans un congrès hal-02801036v1
	Diurnal compositional changes of tomato fruit and leaf Camille Benard , Stéphane Bernillon , Sonia Osorio-Algar , Mickael M. Maucourt , Benoit Biais Metabolomics 2013, Jul 2013, Glasgow, United Kingdom. 1 p Communication dans un congrès hal-02803658v1
	Tools and applications in plant metabolomics at Bordeaux Metabolome Fluxome Facility (PMFB; http://www.bordeaux.inra.fr/umr619/NMR.htm) Catherine C. Deborde , Stéphane Bernillon , Mickael M. Maucourt , Cécile Cabasson , Benoit Biais 5. Journées scientifiques du Réseau Français de Métabolomique et Fluxomique, Labo/service de l'auteur, Ville service., May 2011, Paris, France Communication dans un congrès hal-02749839v1
	Plant metabolomics at Bordeaux Metabolome-Fluxome Facility. Tools and applications at PMFB Catherine C. Deborde , Stéphane Bernillon , Mickael M. Maucourt , Cécile Cabasson , Isabelle Quintana 4. Journées scientifiques du Réseau Français de Métabolomique et Fluxomique, May 2010, Marseille, France Communication dans un congrès hal-02756773v1
	Applications and tools in plant metabolomics at Bordeaux Metabolome-Fluxome Facility Catherine C. Deborde , Stéphane Bernillon , Mickael M. Maucourt , Cécile Cabasson , Patricia Ballias Metabolomics 2010, Jun 2010, Amsterdam, Netherlands Communication dans un congrès hal-02757642v1

	MetaboHUB-Bordeaux Stéphane Bernillon , Cecile Cabasson , Cédric Cassan , Grégory da Costa , Catherine Deborde Journées Scientifiques INRA-BAP, Sep 2019, Hyères, France. , 2019 Poster de conférence hal-02570809v1
	Combined metabolomic and proteomic profiling of maize leaf to reveal metabolic responses to cold temperatures Maria Urrutia , Melisande Blein-Nicolas , Stéphane Bernillon , Catherine Deborde , Mickaël Maucourt 11. Journées Scientifiques du RFMF, May 2018, Liège, Belgium. pp.P25, 2018, 11. Journées Scientifiques du RFMF Poster de conférence hal-03125712v1
	Plant Metabolomics at Bordeaux Metabolome Facility, a member of MetaboHUB and PHENOME IA projects. Tools and Applications Catherine C. Deborde , Patricia Ballias , Camille Bénard , Stéphane Bernillon , Thierry Berton 10. journées scientifiques du Réseau Francophone de Métabolomique et Fluxomique RFMF 2016, May 2016, Montpellier, France. 2016 Poster de conférence hal-02743906v1
	Searching for marker metabolites of crop performance Annick Moing , Maria Urrutia , Olivier Fernandez , Vanessa Zhendre , Nadia Lamari Metabolomics 2016. 12. Annual Conference of the Metabolomics Society, Jun 2016, Dublin, United Kingdom. 2016 Poster de conférence hal-02744241v1
	Plant Metabolomics at Bordeaux Metabolome Facility, a member of MetaboHUB and PHENOME IA projects. Tools and Applications Catherine C. Deborde , Patricia Ballias , Camille Bénard , Stéphane Bernillon , Thierry Berton Metabolomics 2016. 12. Annual Conference of the Metabolomics Society, Jun 2016, Dublin, United Kingdom. 2016 Poster de conférence hal-02741696v1
	Combining MS and NMR metabolomic profiling during tomato fruit development to study environment effect on metabolism Léa Roch , Stéphane Bernillon , Mickael M. Maucourt , Catherine C. Deborde , Camille Bénard 9. Journées scientifiques du RFMF, Jun 2015, Lille, France. 2015 Poster de conférence hal-02739251v1
	Combining MS and proton NMR metabolomic profiling during tomato fruit development to study environment effect on metabolism Léa Roch , Stéphane Bernillon , Mickael Maucourt , Catherine Deborde , Camille Benard 12. Solanaceae Conference SOL 2015, Oct 2015, Bordeaux, France. 2015, SOL 2015 - Book of abstracts Poster de conférence hal-01606414v1
	Cold treatment affects the metabolite profiles of maize leaves Nadia Lamari , Vanessa Zhendre , Stéphane Bernillon , Mickael M. Maucourt , Catherine C. Deborde 9. Journées scientifiques du RFMF, Jun 2015, Lille, France. 2015 Poster de conférence hal-02742488v1
	Plant Metabolomics at Bordeaux Metabolome Facility, a member of MetaboHUB and PHENOME IA projects. Tools and Applications. Annick Moing , Catherine C. Deborde , Patricia Ballias , Camille Bénard , Stéphane Bernillon 9. Journées scientifiques du RFMF, Jun 2015, Lille, France. 2015 Poster de conférence hal-02743630v1
	Plant Metabolomics at Bordeaux Metabolome Facility, a member of MetaboHUB IA project. Tools and Applications Annick Moing , Catherine C. Deborde , Patricia Ballias , Camille Bénard , Stéphane Bernillon 8. Journées Scientifiques du Réseau Français de Métabolomique et Fluxomique RFMF, May 2014, Lyon, France. 1 p., 2014 Poster de conférence hal-02799366v1
	Combining metabolite and enzymatic profiling during tomato fruit development Mickael M. Maucourt , Camille Bénard , Benoit Biais , Patricia Ballias , Catherine C. Deborde 8. Journées Scientifiques du Réseau Français de Métabolomique et Fluxomique RFMF, May 2014, Lyon, France. 1 p., 2014 Poster de conférence hal-02793996v1
	On-going method developments in Bordeaux Metabolome Facility Stéphane Bernillon , Benoit Biais , Catherine C. Deborde , Laetitia Fouillen , Yvon Guntz Metabolomics 2013 - 9. Annual conference of the Metabolomics Society, Jun 2013, Glasgow, United Kingdom. 2013 Poster de conférence hal-02804388v1
	Influence of diurnal factor on compositional changes of tomato fruit and leaf Camille Benard , Stéphane Bernillon , Sonia Osorio-Algar , Mickael M. Maucourt , Benoit Biais 7. Journées scientifiques du Réseau Français de Métabolomique et Fluxomique, Jun 2013, Amiens, France. 2013 Poster de conférence hal-02805301v1
	Coordinated methodological developments for plant metabolomics at Bordeaux Stéphane Bernillon , Benoit Biais , Catherine C. Deborde , Laetitia Fouillen , Yvon Guntz 7. Journées scientifiques du Réseau Français de Métabolomique et de Fluxomique, Jun 2013, Amiens, France. 2013 Poster de conférence hal-02810760v1

Daniel Jacob

Présentation

Domaines de recherche

Compétences

Publications

Multi-omics quantitative data of tomato fruit unveils regulation modes of least variable metabolites

Predictive metabolomics of multiple Atacama plant species unveils a core set of generic metabolites for extreme climate resilience

Maize metabolome and proteome responses to controlled cold stress partly mimic early‐sowing effects in the field and differ from those of Arabidopsis

Metabolomic characterization of sunflower leaf allows discriminating genotype groups or stress levels with a minimal set of metabolic markers

Metabotyping of 30 maize hybrids under early-sowing conditions reveals potential marker-metabolites for breeding

Metabolomic profiling in tomato reveals diel compositional changes in fruit affected by source-sink relationships.

Deciphering genetic diversity and inheritance of tomato fruit weight and composition through a systems biology approach

Combining phenotypic, metabolome and proteome data to study maize response to a mild nitrogen deficit

Integrative and predictive biology outside the plant: linking computational tools to fleshy fruit systems

Leaf marker metabolites for low nitrogen stress in maize

Using developmental and diurnal compositional changes of tomato to study metabolism

La métabolomique : un outil de la génomique fonctionnelle au service de la biologie des systèmes

Diurnal compositional changes of tomato fruit and leaf

Tools and applications in plant metabolomics at Bordeaux Metabolome Fluxome Facility (PMFB; http://www.bordeaux.inra.fr/umr619/NMR.htm)

Plant metabolomics at Bordeaux Metabolome-Fluxome Facility. Tools and applications at PMFB

Applications and tools in plant metabolomics at Bordeaux Metabolome-Fluxome Facility

MetaboHUB-Bordeaux

Combined metabolomic and proteomic profiling of maize leaf to reveal metabolic responses to cold temperatures

Plant Metabolomics at Bordeaux Metabolome Facility, a member of MetaboHUB and PHENOME IA projects. Tools and Applications

Searching for marker metabolites of crop performance

Plant Metabolomics at Bordeaux Metabolome Facility, a member of MetaboHUB and PHENOME IA projects. Tools and Applications

Combining MS and NMR metabolomic profiling during tomato fruit development to study environment effect on metabolism

Combining MS and proton NMR metabolomic profiling during tomato fruit development to study environment effect on metabolism

Cold treatment affects the metabolite profiles of maize leaves

Plant Metabolomics at Bordeaux Metabolome Facility, a member of MetaboHUB and PHENOME IA projects. Tools and Applications.

Plant Metabolomics at Bordeaux Metabolome Facility, a member of MetaboHUB IA project. Tools and Applications

Combining metabolite and enzymatic profiling during tomato fruit development

On-going method developments in Bordeaux Metabolome Facility

Influence of diurnal factor on compositional changes of tomato fruit and leaf

Coordinated methodological developments for plant metabolomics at Bordeaux