Damien Hinsinger

Documents

Publications

	Phylogenomics and a revised tribal classification of subfamily Dipterocarpoideae (Dipterocarpaceae) Tijana Cvetković , Damien Hinsinger , Daniel Thomas , Jan Wieringa , Elango Velautham Taxon, 2022, 71 (1), pp.85-102. ⟨10.1002/tax.12648⟩ Article dans une revue hal-03935018v1
	Phylogenomics resolves deep subfamilial relationships in Malvaceae s.l. Tijana Cvetković , Fabiola Areces-Berazain , D. D. Hinsinger , Daniel Thomas , Jan Wieringa G3, 2021, 11 (7), ⟨10.1093/g3journal/jkab136⟩ Article dans une revue hal-03370590v1
	Chromosome‐level reference genome of the soursop ( Annona muricata ): A new resource for Magnoliid research and tropical pomology Joeri Strijk , D. D. Hinsinger , Mareike Roeder , Lars Chatrou , Thomas Couvreur Molecular Ecology Resources, 2021, 21 (5), pp.1608-1619. ⟨10.1111/1755-0998.13353⟩ Article dans une revue hal-03370609v1
	Genome-wide supermatrix analyses of maples (Acer, Sapindaceae) reveal recurring inter-continental migration, mass extinction, and rapid lineage divergence Fabiola Areces-Berazain , D. D. Hinsinger , Joeri Strijk Genomics, 2021, 113 (2), pp.681-692. ⟨10.1016/j.ygeno.2021.01.014⟩ Article dans une revue hal-03370594v1
	Genomics of the critically endangered monotypic genus Sinopora: the plastome of S. hongkongensis (Lauraceae) Angelo Damian Armijos Carrion , D. D. Hinsinger , Joeri Sergej Strijk Mitochondrial DNA Part B Resources, 2020, 5 (1), pp.379-381. ⟨10.1080/23802359.2019.1703590⟩ Article dans une revue hal-03370630v1
	Plastome comparative genomics in maples resolves the infrageneric backbone relationships Fabiola Areces-Berazain , Yixi Wang , D. D. Hinsinger , Joeri Strijk PeerJ, 2020, 8, pp.e9483. ⟨10.7717/peerj.9483⟩ Article dans une revue hal-03370614v1
	ECuADOR—Easy Curation of Angiosperm Duplicated Organellar Regions, a tool for cleaning and curating plastomes assembled from next generation sequencing pipelines Angelo Armijos Carrion , D. D. Hinsinger , Joeri Strijk PeerJ, 2020, 8, pp.e8699. ⟨10.7717/peerj.8699⟩ Article dans une revue hal-03370620v1
	Museomics for reconstructing historical floristic exchanges: Divergence of stone oaks across Wallacea Joeri Strijk , Nguyen Van Ngoc , Joan Pereira , J. Slik , Rahayu Sukri PLoS ONE, 2020, 15 (5), pp.e0232936. ⟨10.1371/journal.pone.0232936⟩ Article dans une revue hal-03370625v1
	Plastome of Quercus xanthoclada and comparison of genomic diversity amongst selected Quercus species using genome skimming D. D. Hinsinger , Joeri Sergej Strijk PhytoKeys, 2019, 132, pp.75-89. ⟨10.3897/phytokeys.132.36365⟩ Article dans une revue hal-03370655v1
	The plastome sequence of Laurus azorica (Seub.) Franco, an endemic tree species of the Azores islands Xi-Jian Liang , D. D. Hinsinger , Rui Bento Elias , Joeri Sergej Strijk Mitochondrial DNA Part B Resources, 2019, 4 (1), pp.363-365. ⟨10.1080/23802359.2018.1545536⟩ Article dans une revue hal-03370647v1
	Trochodendron aralioides, the first chromosome-level draft genome in Trochodendrales and a valuable resource for basal eudicot research Joeri Strijk , D. D. Hinsinger , Fengping Zhang , Kunfang Cao GigaScience, 2019, 8 (11), ⟨10.1093/gigascience/giz136⟩ Article dans une revue hal-03370633v1
	Exploring evolution and diversity of Chinese Dipterocarpaceae using next-generation sequencing Tijana Cvetković , D. D. Hinsinger , Joeri Sergej Strijk Scientific Reports, 2019, 9 (1), ⟨10.1038/s41598-019-48240-y⟩ Article dans une revue hal-03370635v1
	The first complete chloroplast genome of a major mangrove species Sonneratia alba Sm. and its implications on conservation efforts Tianhui Yu , D. D. Hinsinger , Joeri Sergej Strijk , Alison Kim Shan Wee Mitochondrial DNA Part B Resources, 2018, 3 (2), pp.500-502. ⟨10.1080/23802359.2018.1463828⟩ Article dans une revue hal-03370663v1
	Characterization of the complete chloroplast genome of endangered Cycads Zamia fischeri Miq. ex Lem Jin-Yan Lei , D. D. Hinsinger , Guo-Feng Jiang Mitochondrial DNA Part B Resources, 2018, 3 (2), pp.1059-1061. ⟨10.1080/23802359.2018.1508387⟩ Article dans une revue hal-03370662v1
	The complete mitochondrial genome of the Basidiomycete fungus Pleurotus cornucopiae (Paulet) Rolland Li-Ming Xu , D. D. Hinsinger , Guo-Feng Jiang Mitochondrial DNA Part B Resources, 2018, 3 (1), pp.73-75. ⟨10.1080/23802359.2017.1422405⟩ Article dans une revue hal-03370666v1
	Fishing for barcodes in the Torrent: from COI to complete mitogenomes on NGS platforms Damien Hinsinger , Régis Debruyne , Maeva Thomas , Gaël Denys , Marion I. Mennesson DNA Barcodes, 2015, 3 (1), pp.170-186. ⟨10.1515/dna-2015-0019⟩ Article dans une revue mnhn-02309917v1
	The phylogeography of Eurasian Fraxinus species reveals ancient transcontinental reticulation D. Hinsinger , M. Gaudeul , A. Couloux , J. Bousquet , Nathalie Frascaria-Lacoste Molecular Phylogenetics and Evolution, 2014, 77, pp.223-237 Article dans une revue hal-01569392v1
	The Phylogeny and Biogeographic History of Ashes (Fraxinus, Oleaceae) Highlight the Roles of Migration and Vicariance in the Diversification of Temperate Trees D.D. Hinsinger , Jolly Basak , Myriam Gaudeul , Corinne Cruaud , Paola Bertolino PLoS ONE, 2013, 8 (11), pp.e80431. ⟨10.1371/journal.pone.0080431⟩ Article dans une revue hal-01569388v1
	Phylogenetic footprints of an Antarctic radiation: The Trematominae (Notothenioidei, Teleostei) A. -C. Lautredou , D. D. Hinsinger , C. Gallut , C. -H. C. Cheng , M. Berkani Molecular Phylogenetics and Evolution, 2012, 65 (1), pp.87-101. ⟨10.1016/j.ympev.2012.05.032⟩ Article dans une revue hal-01544915v1
	Deciduous Trees and the Application of Universal DNA Barcodes: A Case Study on the Circumpolar Fraxinus M. Arca , D.D. Hinsinger , C. Cruaud , A. Tillier , J. Bousquet PLoS ONE, 2012, 7 (3), ⟨10.1371/journal.pone.0034089⟩ Article dans une revue hal-01569306v1
	Pseudorhabdosynochus venus n. sp. (Monogenea, Diplectanidae) from Epinephelus howlandi (Perciformes: Serranidae) off New Caledonia Jean-Lou Justine , Damien Hinsinger Systematic Parasitology, 2006, 92, pp.155-160 Article dans une revue hal-00079778v1

	Exploitation de la puissance du séquençage pour l’amélioration des plantes Damien Hinsinger Mini congrès, CEA - Genoscope, Jun 2022, Evry, France Communication dans un congrès hal-03937956v1
	Exploitation de la puissance du séquençage pour l’amélioration des plantes Damien Hinsinger Séminaire Genoscope, Mar 2022, Evry, France Communication dans un congrès hal-03975365v1

	Feedback on tGBS with Allegro : Does it hit the target ? Aurélie Berard , Aurélie Canaguier , Romane Guilbaud , Isabelle Le Clainche , Marie-Christine Le Paslier PAG XXX. Plant and Animal Genome, Jan 2023, San Diego (California), United States. , ⟨10.15454/4NYHD6⟩ Poster de conférence hal-03937923v1
	Long Reads for Long-Term Goals : A Genome Resource for Lavander Genetic Improvement Berline Fopa Fomeju , Aurélie Berard , Isabelle Le Clainche , Aurélie Canaguier , Elodie Belmonte PAG XXX Plant and Animal Genome Conference, Jan 2023, San Diego (California), United States Poster de conférence hal-03937877v1
	La fibre génomique du Lin Damien Hinsinger , Romane Guilbaud , Sandrine Contenot , Aurélie Canaguier , Patricia Faivre-Rampant 30ème édition du Festival du Lin et de la Fibre Artistique, Jul 2022, Saint-Pierre-Le-Viger, France. Poster de conférence hal-03937438v1
	Étude du polymorphisme des génomes végétaux Damien Hinsinger , Romane Guilbaud , Sandrine Contenot , Aurélie Canaguier , Patricia Faivre-Rampant Colloque INRAE Genomics, May 2022, Orléans, France. Poster de conférence hal-03935707v1

	The soursop genome and comparative genomics of basal angiosperms provide new insights on evolutionary incongruence Joeri Strijk , D. D. Hinsinger , Mareike Roeder , Lars Chatrou , Thomas Couvreur 2021 Pré-publication, Document de travail hal-03370658v1

Damien Hinsinger

Publications

Phylogenomics and a revised tribal classification of subfamily Dipterocarpoideae (Dipterocarpaceae)

Phylogenomics resolves deep subfamilial relationships in Malvaceae s.l.

Chromosome‐level reference genome of the soursop ( Annona muricata ): A new resource for Magnoliid research and tropical pomology

Genome-wide supermatrix analyses of maples (Acer, Sapindaceae) reveal recurring inter-continental migration, mass extinction, and rapid lineage divergence

Genomics of the critically endangered monotypic genus Sinopora: the plastome of S. hongkongensis (Lauraceae)

Plastome comparative genomics in maples resolves the infrageneric backbone relationships

ECuADOR—Easy Curation of Angiosperm Duplicated Organellar Regions, a tool for cleaning and curating plastomes assembled from next generation sequencing pipelines

Museomics for reconstructing historical floristic exchanges: Divergence of stone oaks across Wallacea

Plastome of Quercus xanthoclada and comparison of genomic diversity amongst selected Quercus species using genome skimming

The plastome sequence of Laurus azorica (Seub.) Franco, an endemic tree species of the Azores islands

Trochodendron aralioides, the first chromosome-level draft genome in Trochodendrales and a valuable resource for basal eudicot research

Exploring evolution and diversity of Chinese Dipterocarpaceae using next-generation sequencing

The first complete chloroplast genome of a major mangrove species Sonneratia alba Sm. and its implications on conservation efforts

Characterization of the complete chloroplast genome of endangered Cycads Zamia fischeri Miq. ex Lem

The complete mitochondrial genome of the Basidiomycete fungus Pleurotus cornucopiae (Paulet) Rolland

Fishing for barcodes in the Torrent: from COI to complete mitogenomes on NGS platforms

The phylogeography of Eurasian Fraxinus species reveals ancient transcontinental reticulation

The Phylogeny and Biogeographic History of Ashes (Fraxinus, Oleaceae) Highlight the Roles of Migration and Vicariance in the Diversification of Temperate Trees

Phylogenetic footprints of an Antarctic radiation: The Trematominae (Notothenioidei, Teleostei)

Deciduous Trees and the Application of Universal DNA Barcodes: A Case Study on the Circumpolar Fraxinus

Pseudorhabdosynochus venus n. sp. (Monogenea, Diplectanidae) from Epinephelus howlandi (Perciformes: Serranidae) off New Caledonia

Exploitation de la puissance du séquençage pour l’amélioration des plantes

Exploitation de la puissance du séquençage pour l’amélioration des plantes

Feedback on tGBS with Allegro : Does it hit the target ?

Long Reads for Long-Term Goals : A Genome Resource for Lavander Genetic Improvement

La fibre génomique du Lin

Étude du polymorphisme des génomes végétaux

The soursop genome and comparative genomics of basal angiosperms provide new insights on evolutionary incongruence