Skip to Main content
Number of documents


Systems biology, Systems Ecology & Computational Biology

I try to represent the behavior of living systems on different scales by various modeling approaches based on constraint programming. In my opinion, a living system should be formalized as an hybrid automaton under constraints.


My biological studies concern biological systems from molecular to ecological scales, with a special emphasis on marine systems.

Clémence Frioux   

Journal articles2 documents

  • Sylvain Prigent, Clémence Frioux, Simon Dittami, Sven Thiele, Abdelhalim Larhlimi, et al.. Meneco, a Topology-Based Gap-Filling Tool Applicable to Degraded Genome-Wide Metabolic Networks. PLoS Computational Biology, Public Library of Science, 2017, 13 (1), pp.e1005276. ⟨10.1371/journal.pcbi.1005276⟩. ⟨hal-02937671⟩
  • Julie Laniau, Clémence Frioux, Jacques Nicolas, Caroline Baroukh, Maria-Paz Cortés, et al.. Combining graph and flux-based structures to decipher phenotypic essential metabolites within metabolic networks. PeerJ, PeerJ, 2017, 5, pp.e3860. ⟨10.7717/peerj.3860⟩. ⟨hal-01635688⟩