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Double-stranded RNA binding proteins DRB2 and DRB4 have an antagonistic impact on polymerase IV-dependent siRNA levels in Arabidopsis

 Thierry Pelissier , Marion Clavel , Cristian Chaparro , Marie-Noelle Pouch-Pelissier , Herve Vaucheret , et al.
RNA, 2011, 17 (8), pp.1502 - 1510. ⟨10.1261/rna.2680711⟩
Article dans une revue hal-01190246v1

Recurrent bleaching inducing thermotolerance increases: a dive into the holobiont adaptability through (meta)genomic and epigenomic mechanisms

 Jeremie Vidal-Dupiol , Eve R Toulza , Christoph Grunau , Cristian Chaparro , David R Roquis , et al.
13th International Coral Reef Symposium, Jun 2016, Honolulu, United States. pp.357
Communication dans un congrès hal-03965822v1
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Natural resistance to Fasciola hepatica (Trematoda) in Pseudosuccinea columella snails: A review from literature and insights from comparative “omic” analyses

 Annia Alba , Guillaume Tetreau , Cristian Chaparro , Jorge Sánchez , Antonio Vázquez , et al.
Developmental and Comparative Immunology, 2019, 101, pp.103463. ⟨10.1016/j.dci.2019.103463⟩
Article dans une revue hal-02279394v1
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Measuring histone modifications in the human parasite Schistosoma mansoni

 Ronaldo de Carvalho Augusto , David Roquis , Marion Picard , Cristian Chaparro , Celine Cosseau , et al.
David J. Timson. Schistosoma mansoni. Methods and Protocols, 2151, Springer, pp.93-107, 2020, Methods in Molecular Biology, 978-1-0716-0634-6. ⟨10.1007/978-1-0716-0635-3_9⟩
Chapitre d'ouvrage hal-03328481v1

Is the cercarial emission rhythm of the parasite Schistosoma mansoni circadian ?

 Chrystelle Lasica , Gabriel Mouahid , Chevalier F.D. , Winka Le Clec’h , Cristian Chaparro , et al.
18th Meeting of Ecology and Evolution of Infectious Diseases (EEID), Jun 2021, Montpellier, France
Poster de conférence hal-03428131v1
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Terminal-repeat Retrotransposons with GAG domain (TR-GAG) in plant genomes: A new testimony on the complex world of transposable elements

 Cristian Chaparro , Thomas Gayraud , Rogerio Fernandes de Souza , Douglas Silva Domingues , Sélastique Doffou Akaffou , et al.
Genome Biology and Evolution, 2015, 7 (2), pp.493-504. ⟨10.1093/gbe/evv001⟩
Article dans une revue hal-01162666v2
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Automated ChIPmentation procedure on limited biological material of the human blood fluke Schistosoma mansoni

 Chrystelle Lasica , Ronaldo de Carvalho Augusto , Hélène Moné , Gabriel Mouahid , Cristian Chaparro , et al.
Wellcome Open Research, 2022, 7, pp.133. ⟨10.12688/wellcomeopenres.17779.1⟩
Article dans une revue hal-03255320v2
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Frequency and mitotic heritability of epimutations in Schistosoma mansoni

 David Roquis , Anne Rognon , Cristian Chaparro , Jérôme Boissier , Nathalie Arancibia , et al.
Molecular Ecology, 2016, EPIGENETIC STUDIES IN ECOLOGY AND EVOLUTION, 25 (8), pp.1741-1758. ⟨10.1111/mec.13555⟩
Article dans une revue hal-01311089v1
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Single cell RNA sequencing reveals hemocyte heterogeneity in Biomphalaria glabrata: Plasticity over diversity

 Remi Pichon , Silvain Pinaud , Emmanuel Vignal , Cristian Chaparro , Marine Pratlong , et al.
Frontiers in Immunology, 2022, 13, ⟨10.3389/fimmu.2022.956871⟩
Article dans une revue hal-03772193v1
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No pre-zygotic isolation mechanisms between Schistosoma haematobium and Schistosoma bovis parasites: From mating interactions to differential gene expression

 Julien Kincaid-Smith , Eglantine Mathieu-Bégné , Cristian Chaparro , Marta Reguera-Gomez , Stephen Mulero , et al.
PLoS Neglected Tropical Diseases, 2021, 15 (5), pp.e0009363. ⟨10.1371/journal.pntd.0009363⟩
Article dans une revue hal-03255515v1

Detailed analysis of a contiguous 22-Mb region of the maize genome.

 Fusheng Wei , Joshua C Stein , Chengzhi Liang , Jianwei Zhang , Robert S Fulton , et al.
PLoS Genetics, 2009, 5 (11), pp.e1000728. ⟨10.1371/journal.pgen.1000728⟩
Article dans une revue hal-00736698v1
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The methylome of Biomphalaria glabrata and other mollusks: enduring modification of epigenetic landscape and phenotypic traits by a new DNA methylation inhibitor

 Nelia Luviano , Marie Lopez , Fleur Gawehns , Cristian Chaparro , Paola B Arimondo , et al.
Epigenetics & Chromatin, 2021, 14 (1), pp.48. ⟨10.1186/s13072-021-00422-7⟩
Article dans une revue pasteur-03427775v2
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Hypomethylated poplars show higher tolerance to water deficit and highlight a dual role for DNA methylation in shoot meristem: regulation of stress response and genome integrity

 M.D. D Sow , A-L Le Gac , R. Fichot , S. Lanciano , A. Delaunay , et al.
2021
Pré-publication, Document de travail hal-03239719v1
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Satellite-like W Elements: repetitive, transcribed, and putative mobile genetic factors with potential roles for biology and evolution of Schistosoma mansoni

 Maria Stitz , Cristian Chaparro , Zhigang Lu , V Janett Janett Olzog , Christina E Weinberg , et al.
Genome Biology and Evolution, 2021, 13 (10), pp.evab204. ⟨10.1093/gbe/evab204⟩
Article dans une revue hal-03333536v1
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Early life microbial exposures shape the Crassostrea gigas immune system for lifelong and intergenerational disease protection

 Manon Fallet , C. Montagnani , Bruno Petton , Luc Dantan , Julien de Lorgeril , et al.
Microbiome, 2022, 10, pp.85. ⟨10.1186/s40168-022-01280-5⟩
Article dans une revue hal-03635473v2
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Diverging patterns of introgression from Schistosoma bovis across S. haematobium African lineages

 Olivier REY , Eve Toulza , Jérôme Boissier , Cristian Chaparro , Jean-François Allienne , et al.
PLoS Pathogens, 2021, 17 (2), pp.e1009313. ⟨10.1371/journal.ppat.1009313⟩
Article dans une revue hal-03176500v1
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Targeted insertion of reporter transgene into a gene safe harbor in human blood fluke, Schistosoma mansoni

 Wannaporn Ittiprasert Tanno , Max F Möscheid , Cristian Chaparro , Victoria H Mann , Thomas Quack , et al.
2022
Pré-publication, Document de travail hal-03771118v1
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Contribution of Viral Genomic Diversity to Oyster Susceptibility in the Pacific Oyster Mortality Syndrome

 Jean Delmotte , Cristian Chaparro , Richard Galinier , Julien de Lorgeril , Bruno Petton , et al.
Frontiers in Microbiology, 2020, 11, pp.1579. ⟨10.3389/fmicb.2020.01579⟩
Article dans une revue hal-02915023v1

RetrOryza: a database of the rice LTR-retrotransposons.

 Cristian Chaparro , Romain Guyot , Andrea Zuccolo , Benoit Piegu , Olivier Panaud
Nucleic Acids Research, 2007, 35 (Database issue), pp.D66-70. ⟨10.1093/nar/gkl780⟩
Article dans une revue hal-00164403v1

Double-stranded RNA binding proteins DRB2 and DRB4 have an antagonistic impact on polymerase IV-dependent siRNA levels in Arabidopsis

 T. Pelissier , M. Clavel , C. Chaparro , M.-N. Pelissier , H. Vaucheret , et al.
RNA, 2011, 17 (8), pp.1502-1510. ⟨10.1261/rna.2680711⟩
Article dans une revue hal-02119374v1
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Abiotic stress and genome dynamics: specific genes and transposable elements response to iron excess in rice

 Taciane Finatto , Antonio Costa de Oliveira , Cristian Chaparro , L.C. da Maia , D.R. Farias , et al.
Rice, 2015, 8, pp.13. ⟨10.1186/s12284-015-0045-6⟩
Article dans une revue hal-01162622v1
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A simple ATAC-seq protocol for population epigenetics

 Ronaldo de Carvalho Augusto , Olivier REY , Céline Cosseau , Cristian Chaparro , Jeremie Vidal-Dupiol , et al.
Wellcome Open Research, 2021, 5, pp.121. ⟨10.12688/wellcomeopenres.15552.2⟩
Article dans une revue hal-03145575v2
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On the Importance to Acknowledge Transposable Elements in Epigenomic Analyses

 Emmanuelle Lerat , Josep Casacuberta , Cristian Chaparro , Cristina Vieira
Genes, 2019, 10 (4), pp.258. ⟨10.3390/genes10040258⟩
Article dans une revue hal-02093613v1
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Targeted insertion and reporter transgene activity at a gene safe harbor of the human blood fluke, Schistosoma mansoni

 Wannaporn Ittiprasert , Max F Moescheid , Cristian Chaparro , Victoria H Mann , Rutchanee Rodpai , et al.
Cell Reports Methods, 2023, 3 (7), pp.100535. ⟨10.1016/j.crmeth.2023.100535⟩
Article dans une revue hal-04181018v1
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Whole genome sequencing and morphological analysis of the human-infecting schistosome emerging in Europe reveals a complex admixture between Schistosoma haematobium and Schistosoma bovis parasites

 Julien Kincaid Smith , Alan Tracey , Ronaldo de Carvalho Augusto , Ingo Bulla , Nancy Holroyd , et al.
2018
Pré-publication, Document de travail hal-03134801v1
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Histone methylation changes are required for life cycle progression in the human parasite Schistosoma mansoni

 David Roquis , Aaron Taudt , Kathrin P Geyer , Gilda Padalino , Karl F Hoffmann , et al.
PLoS Pathogens, 2018, 14 (5), pp.e1007066. ⟨10.1371/journal.ppat.1007066⟩
Article dans une revue hal-01808531v1

Is the cercarial emission rhythm of the parasite Schistosoma mansoni circadian?

 Chrystelle Lasica , Gabriel Mouahid , Chevalier F.D. , Winka Le Clec’h , Cristian Chaparro , et al.
86th Cold Spring Harbor Laboratory Symposium on Quantitative Biology: Biological Time Keeping, Jun 2021, Online, United States
Poster de conférence hal-03428135v1

Cracking the code of Pacific oyster mortality syndrom

 Guillaume Mitta , Julien de Lorgeril , Aude Lucasson , Bruno Petton , Eve Toulza , et al.
Aqua 2018 14th International Symposium on Aquaculture Nutrition, Aug 2018, Montpellier, France
Communication dans un congrès hal-03965691v1

From methylome to integrative analysis of tissue specificity

 Thomas Duge de Bernonville , Christian Daviaud , Cristian Chaparro , Jörge Tost , Stéphane Maury
Methods in Molecular Biology, 2022, Catharanthus roseus Methods and Protocols, 2505, pp.223-240. ⟨10.1007/978-1-0716-2349-7_16⟩
Article dans une revue cea-04346942v1

Transpositional landscape of the rice genome revealed by paired-end mapping of high-throughput re-sequencing data

 Francois Sabot , Nathalie Picault , Moaine El-Baidouri , Christel Llauro , Cristian Chaparro , et al.
Plant Journal, 2011, 66 (2), pp.241-246. ⟨10.1111/j.1365-313X.2011.04492.x⟩
Article dans une revue hal-02114338v1
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