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Genomics analysis of Aphanomyces spp. identifies a new class of oomycete effector associated with host adaptation

 Elodie Gaulin , Michiel Pel , Laurent Camborde , Hélène San Clemente , Sarah Courbier , et al.
BMC Biology, 2018, 16 (1), ⟨10.1186/s12915-018-0508-5⟩
Article dans une revue hal-01891875v1
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Impact of transposable elements on genome size variation between two closely related crustacean species

 Thomas Becking , Clement Gilbert , Richard Cordaux
Analytical Biochemistry, 2020, ⟨10.1016/j.ab.2020.113770⟩
Article dans une revue hal-03020081v1
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Transposable elements

 Alexandre Hayward , Clement Gilbert
Current Biology - CB, 2023, 32 (17), pp.PR904-R909. ⟨10.1016/j.cub.2022.07.044⟩
Article dans une revue hal-03799727v1
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Genome sequencing reveals coinfection by multiple chikungunya virus genotypes in a recent outbreak in Brazil

 Lais Ceschini Machado , Mariana Carolina de Morais-Sobral , Tulio de Lima Campos , Mylena Ribeiro Pereira , Maria de Fátima Pessoa Militão de Albuquerque , et al.
PLoS Neglected Tropical Diseases, 2019, 13 (5), pp.e0007332. ⟨10.1371/journal.pntd.0007332⟩
Article dans une revue hal-02341006v1
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Sidestepping Darwin: horizontal gene transfer from plants to insects

 Clément Gilbert , Florian Maumus
Current Opinion in Insect Science, 2023, 57, pp.101035. ⟨10.1016/j.cois.2023.101035⟩
Article dans une revue hal-04072018v1
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Genome-wide patterns of bracovirus chromosomal integration into multiple host tissues during parasitism

 Héloïse Muller , Mohamed Amine Chebbi , Clémence Bouzar , George Périquet , Taiadjana Fortuna , et al.
Journal of Virology, 2021, ⟨10.1128/JVI.00684-21⟩
Article dans une revue hal-03379936v1

Genomic context drives transcription of insertion sequences in the bacterial endosymbiont Wolbachia wVulC.

 Nicolas Cerveau , Clément Gilbert , Chao Liu , Roger A Garrett , Pierre Grève , et al.
Gene, 2015, 564, pp.81-86. ⟨10.1016/j.gene.2015.03.044⟩
Article dans une revue hal-01144055v1

Cargo capacity of phages and plasmids and other factors influencing horizontal transfers of prokaryote transposable elements

 Sébastien Leclercq , Clément Gilbert , Richard Cordaux
Mobile Genetic Elements, 2012, 2 (2), pp.115-118. ⟨10.4161/mge.20352⟩
Article dans une revue hal-00743674v1
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Assessing the Impact of a Viral Infection on the Expression of Transposable Elements in the Cabbage Looper Moth ( Trichoplusia ni )

 Héloïse Muller , Vincent Loiseau , Sandra Guillier , Richard Cordaux , Clément Gilbert
Genome Biology and Evolution, 2021, 13 (11), pp.evab231. ⟨10.1093/gbe/evab231⟩
Article dans une revue hal-03799047v1

Pan-arthropod analysis reveals somatic piRNAs as an ancestral defence against transposable elements

 Samuel Lewis , Kaycee A. Quarles , Yujing Yang , Mélanie Tanguy , Lise L. Frezal , et al.
Nature Ecology & Evolution, 2018, 2, pp.174-181. ⟨10.1038/s41559-017-0403-4⟩
Article dans une revue hal-01657238v1

Horizontal Transfer and Gene Loss Shaped the Evolution of Alpha-Amylases in Bilaterians

 Andrea Desiderato , Marcos Barbeitos , Clément Gilbert , Jean-Luc da Lage
G3, 2019, pp.g3.400826.2019. ⟨10.1534/g3.119.400826⟩
Article dans une revue hal-02406465v1
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The Evolutionary History of Drosophila simulans Y Chromosomes Reveals Molecular Signatures of Resistance to Sex Ratio Meiotic Drive

 Cécile Courret , David Ogereau , Clément Gilbert , Amanda M Larracuente , Catherine Montchamp-Moreau
Molecular Biology and Evolution, 2023, 40 (7), ⟨10.1093/molbev/msad152⟩
Article dans une revue hal-04273952v1
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The diversity of endogenous viral elements in insects

 Clément Gilbert , Carole Belliardo
Current Opinion in Insect Science, 2022, 49, pp.48-55. ⟨10.1016/j.cois.2021.11.007⟩
Article dans une revue hal-03799718v1
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Horizontal transfer of transposons between and within crustaceans and insects

 M. Dupeyron , Sébastien Leclercq , Didier Bouchon , Nicolas Cerveau , Clément Gilbert
Mobile DNA, 2014, 5 (1), pp.4. ⟨10.1186/1759-8753-5-4⟩
Article dans une revue hal-00955962v1
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Monitoring Insect Transposable Elements in Large Double-Stranded DNA Viruses Reveals Host-to-Virus and Virus-to-Virus Transposition

 Vincent Loiseau , Jean Peccoud , Clémence Bouzar , Sandra Guillier , Jiangbin Fan , et al.
Molecular Biology and Evolution, 2021, 38 (9), pp.3512-3530. ⟨10.1093/molbev/msab198⟩
Article dans une revue hal-03376529v1

Horizontal acquisition of transposable elements and viral sequences: patterns and consequences

 Clément Gilbert , Cédric Feschotte
Current Opinion in Genetics and Development, 2018, 49, pp.15-24. ⟨10.1016/j.gde.2018.02.007⟩
Article dans une revue hal-02341017v1

Diversity and evolution of sex determination systems in terrestrial isopods.

 Thomas Becking , Isabelle Giraud , Maryline Raimond , Bouziane Moumen , Christopher Chandler , et al.
Scientific Reports, 2017, 7 (1), pp.1084. ⟨10.1038/s41598-017-01195-4⟩
Article dans une revue hal-01533436v1
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No species-level losses of s2m suggests critical role in replication of SARS-related coronaviruses

 Clément Gilbert , Torstein Tengs
Scientific Reports, 2021, 11 (1), ⟨10.1038/s41598-021-95496-4⟩
Article dans une revue hal-03379923v1
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Characterization of a new case of XMLV (Bxv1) contamination in the human cell line Hep2 (clone 2B)

 Vincent Loiseau , Richard Cordaux , Isabelle Giraud , Agnès Beby-Defaux , Nicolas Lévêque , et al.
Scientific Reports, 2020, 10, ⟨10.1038/s41598-020-73169-y⟩
Article dans une revue hal-03020101v1
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Wide spectrum and high frequency of genomic structural variation, including transposable elements, in large double-stranded DNA viruses

 Vincent Loiseau , Elisabeth A. Herniou , Yannis Moreau , Nicolas Lévêque , Carine Meignin , et al.
Virus Evolution, 2020, 6 (1), pp.vez060. ⟨10.1093/ve/vez060⟩
Article dans une revue hal-02456571v1

The Genome of Armadillidium vulgare (Crustacea, Isopoda) Provides Insights into Sex Chromosome Evolution in the Context of Cytoplasmic Sex Determination

 Mohamed Amine Chebbi , Thomas Becking , Bouziane Moumen , Isabelle Giraud , Clément Gilbert , et al.
Molecular Biology and Evolution, 2019, 36 (4), pp.727-741. ⟨10.1093/molbev/msz010⟩
Article dans une revue hal-02341008v1
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Sex chromosomes control vertical transmission of feminizing Wolbachia symbionts in an isopod

 Thomas Becking , Mohamed Amine Chebbi , Isabelle Giraud , Bouziane Moumen , Tiffany Laverré , et al.
PLoS Biology, 2019, 17 (10), pp.e3000438. ⟨10.1371/journal.pbio.3000438⟩
Article dans une revue hal-03020063v1

The genome of the bee louse fly reveals deep convergences in the evolution of social inquilinism

 Héloïse Bastide , Hélène Legout , Noé Dogbo , David Ogereau , Carolina Prediger , et al.
2022
Pré-publication, Document de travail hal-03864801v1

Viruses as vectors of horizontal transfer of genetic material in eukaryotes.

 Clément Gilbert , Richard Cordaux
Current Opinion in Virology, 2017, 25, pp.16-22. ⟨10.1016/j.coviro.2017.06.005⟩
Article dans une revue hal-01586956v1
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Horizontal transfer and gene loss shaped the evolution of alpha-amylases in bilaterians

 Andrea Desiderato , Marcos Barbeitos , Clément Gilbert , Jean-Luc da Lage
G3, 2020, 10 (2), pp.709-719. ⟨10.1534/g3.119.400826⟩
Article dans une revue hal-02401035v1
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Horizontal Transfer and Gene Loss Shaped the Evolution of Alpha-Amylases in Bilaterians

 Andrea Desiderato , Marcos Barbeitos , Clement Gilbert , Jean-Luc da Lage
G3, 2020, 10 (2), pp.709-719. ⟨10.1534/g3.119.400826⟩
Article dans une revue hal-03020069v1
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Birth of a W sex chromosome by horizontal transfer of Wolbachia bacterial symbiont genome

 Sébastien Leclercq , Julien Thézé , Mohamed Amine Chebbi , Isabelle Giraud , Bouziane Moumen , et al.
Proceedings of the National Academy of Sciences of the United States of America, 2016, 113 (52), pp.15036-15041. ⟨10.1073/pnas.1608979113⟩
Article dans une revue hal-01415929v1
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First Evidence of Past and Present Interactions between Viruses and the Black Soldier Fly, Hermetia illucens

 Robert D Pienaar , Clément Gilbert , Carole Belliardo , Salvador Herrero , Elisabeth A. Herniou
Viruses, 2022, Viruses in Mass-Reared Invertebrates, 14 (6), pp.1274. ⟨10.3390/v14061274⟩
Article dans une revue hal-03694316v1
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Investigating bracovirus chromosomal integration and inheritance in lepidopteran host and nontarget species

 Héloïse Muller , Camille Heisserer , Taiadjana Fortuna , Florence Mougel , Elisabeth Huguet , et al.
Molecular Ecology, In press, ⟨10.1111/mec.16685⟩
Article dans une revue hal-03799713v1
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Chromosome-level genome assembly reveals homologous chromosomes and recombination in asexual rotifer Adineta vaga

 Paul Simion , Jitendra Narayan , Antoine Houtain , Alessandro Derzelle , Lyam Baudry , et al.
Science Advances , 2021, 7 (41), pp.eabg4216. ⟨10.1126/sciadv.abg4216⟩
Article dans une revue hal-03406292v1
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