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Claude Pasquier

Chargé de recherche au CNRS
100%
Libre accès
8
Documents
Affiliations actuelles
  • 13009
Identifiants chercheurs
Site web
  • https://www.i3s.unice.fr/~cpasquie

Présentation

Claude Pasquier is researcher at French National Center for Scientific Research (CNRS). He received a Ph.D. degree in Computer Science from the University of Nice - Sophia Antipolis (now Université Côte d’Azur), France, in 1994. During his thesis, he explored the use of software engineering paradigms in the field of structured document manipulation. He defined both a frame-based language for representing document models, and a system of context-aware document generation and configuration (cf. Prototype-based programming. Subsequently, he was a postdoctoral researcher at the Biophysics and Bioinformatics Laboratory of the University of Athens, Greece, where he conducted research on protein structure prediction. He held positions at the National Institute for Research in Digital Science and Technology (INRIA) and with Schlumberger, Smart Cards & Terminals division (now Gemalto) where he worked on generative programming. Since 2002 when he joined CNRS, he successively worked at Villefranche Oceanographic Laboratory (LOV), the Institute of Biology Valrose (iBV) and New Caledonia Institute of Exact and Applied Sciences (ISEA) where he addressed topics as diverse as semantic data integration, omics data mining and attributed graph mining. Currently at I3S laboratory, he is conducting research focused on complex network mining that combines computer science and systems biology.

Publications

35439
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Evolutionary Divergence of Phosphorylation to Regulate Interactive Protein Networks in Lower and Higher Species

Claude Pasquier , Alain Robichon
International Journal of Molecular Sciences, 2022, 23 (22), pp.14429. ⟨10.3390/ijms232214429⟩
Article dans une revue hal-03881865v1
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Temporal and sequential order of nonoverlapping gene networks unraveled in mated female Drosophila

Claude Pasquier , Alain Robichon
Life Science Alliance, 2021, 5 (2), pp.e202101119. ⟨10.26508/lsa.202101119⟩
Article dans une revue hal-03556359v1
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Computational search of hybrid human/SARS-CoV-2 dsRNA reveals unique viral sequences that diverge from those of other coronavirus strains

Claude Pasquier , Alain Robichon
Heliyon, 2021, 7 (6), pp.e07284. ⟨10.1016/j.heliyon.2021.e07284⟩
Article dans une revue hal-03334468v1
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Transcriptome-wide-scale-predicted dsRNAs potentially involved in RNA homoeostasis are remarkably excluded from genes with no/very low expression in all developmental stages

Claude Pasquier , Sandra Agnel , Alain Robichon
RNA Biology, 2020, 17 (4), pp.554-570. ⟨10.1080/15476286.2020.1717154⟩
Article dans une revue hal-02508884v1
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Computational prediction of miRNA/mRNA duplexomes at the whole human genome scale reveals functional subnetworks of interacting genes with embedded miRNA annealing motifs

Claude Pasquier , Alain Robichon
Computational Biology and Chemistry, 2020, 88, pp.107366. ⟨10.1016/j.compbiolchem.2020.107366⟩
Article dans une revue hal-02999731v1
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The Mapping of Predicted Triplex DNA:RNA in the Drosophila Genome Reveals a Prominent Location in Development- and Morphogenesis-Related Genes

Claude Pasquier , Sandra Agnel , Alain Robichon
G3, 2017, 7 (7), pp.2295 - 2304. ⟨10.1534/g3.117.042911⟩
Article dans une revue hal-01588715v1
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Environmentally selected aphid variants in clonality context display differential patterns of methylation in the genome

Claude Pasquier , Mathilde Clément , Aviv Dombrovsky , Stéphanie Penaud , Martine da Rocha
PLoS ONE, 2014, 9 (12), pp.e115022. ⟨10.1371/journal.pone.0115022⟩
Article dans une revue hal-01151509v1