Publications

Shingo Miyauchi, Enikő Kiss, Alan Kuo, Elodie Drula, Annegret Kohler, et al.. Large-scale genome sequencing of mycorrhizal fungi provides insights into the early evolution of symbiotic traits. Nature Communications, Nature Publishing Group, 2020, 11 (1), ⟨10.1038/s41467-020-18795-w⟩. ⟨hal-03082507⟩

Salvatore Casarrubia, Elena Martino, Stefania Daghino, Annegret Kohler, Emmanuelle Morin, et al.. Modulation of Plant and Fungal Gene Expression Upon Cd Exposure and Symbiosis in Ericoid Mycorrhizal Vaccinium myrtillus. Frontiers in Microbiology, Frontiers Media, 2020, 11, ⟨10.3389/fmicb.2020.00341⟩. ⟨hal-02905623⟩

Laure Schneider‐maunoury, Aurélie Deveau, Myriam Moreno, Flora Todesco, Simone Belmondo, et al.. Two ectomycorrhizal truffles, Tuber melanosporum and T. aestivum , endophytically colonise roots of non‐ectomycorrhizal plants in natural environments. New Phytologist, Wiley, 2020, 225 (6), pp.2542-2556. ⟨10.1111/nph.16321⟩. ⟨hal-02912732⟩

Aurélie Deveau, Philippe Clowez, François Petit, Jean-Paul Maurice, Flora Todesco, et al.. New insights into black truffle biology: Discovery of the potential connecting structure between a Tuber aestivum ascocarp and its host root. Mycorrhiza, Springer Verlag, 2019, 29 (3), pp.219-226. ⟨10.1007/s00572-019-00892-4⟩. ⟨hal-02177354⟩

Gian Maria Niccolò Benucci, Sajeet Haridas, Kurt Labutti, Giorgio Marozzi, Livio Antonielli, et al.. Draft Genome Sequence of the Ectomycorrhizal Ascomycete Sphaerosporella brunnea. Microbiology Resource Announcements, American Society for Microbiology, 2019. ⟨hal-02913048⟩

Pamela Leonardi, Claude Murat-Furminieux, Federico Puliga, Mirco Iotti, Alessandra Zambonelli. Ascoma genotyping and mating type analyses of mycorrhizas and soil mycelia of Tuber borchii in a truffle orchard established by mycelial inoculated plants. Environmental Microbiology, Wiley-Blackwell, 2019, ⟨10.1111/1462-2920.14777⟩. ⟨hal-02352497⟩

Flora Todesco, Simone Belmondo, Yoann Guignet, Liam Laurent, Sandrine Fizzala, et al.. Soil temperature and hydric potential influences the monthly variations of soil Tuber aestivum DnA in a highly productive orchard. Scientific Reports, Nature Publishing Group, 2019, 9, ⟨10.1038/s41598-019-49602-2⟩. ⟨hal-02913042⟩

Meïli Baragatti, Paul-Marie Grollemund, Pierre Montpied, Jean-Luc Dupouey, Joël Gravier, et al.. Influence of annual climatic variations, climate changes, and sociological factors on the production of the Périgord black truffle (Tuber melanosporum Vittad.) from 1903–1904 to 1988–1989 in the Vaucluse (France). Mycorrhiza, Springer Verlag, 2019, 29 (2), pp.1-13. ⟨10.1007/s00572-018-0877-1⟩. ⟨hal-01972724⟩

Claude Murat-Furminieux, Alan Kuo, Kerrie W Barry, Alicia Clum, Rhyan B Dockter, et al.. Draft Genome Sequence of Tuber borchii Vittad., a Whitish Edible Truffle. Genome Announcements, American Society for Microbiology, 2018, 6 (25), ⟨10.1128/genomeA.00537-18⟩. ⟨hal-02154520⟩

Claude Murat, Thibaut Payen, Benjamin Noël, Alan Kuo, Emmanuelle Morin, et al.. Pezizomycetes genomes reveal the molecular basis of ectomycorrhizal truffle lifestyle. Nature Ecology & Evolution, Nature, 2018, 2 (12), pp.1956-1965. ⟨10.1038/s41559-018-0710-4⟩. ⟨hal-02094494⟩

Elena Martino, Emmanuelle Morin, Gwen-Aëlle Grelet, Alan Kuo, Annegret Kohler, et al.. Comparative genomics and transcriptomics depict ericoid mycorrhizal fungi as versatile saprotrophs and plant mutualists. New Phytologist, Wiley, 2018, 217 (3), pp.1213-1229. ⟨10.1111/nph.14974⟩. ⟨hal-02080038⟩

Aurélie Deveau, Annegret Kohler, François Le Tacon, Francis Martin, Virginie Molinier, et al.. Le trufficulteur : Un trait d’union indispensable entre trufficulteurs et scientifiques. Le Trufficulteur Français, Fédération Française des Trufficulteurs, 2017, n°100 spécial, pp.9-10. ⟨hal-02620110⟩

Ulf Büntgen, István Bagi, Oszkár Fekete, Virginie Molinier, Martina Peter, et al.. New insights into the complex relationship between weight and maturity of Burgundy truffles (Tuber aestivum). PLoS ONE, Public Library of Science, 2017, 12 (1), pp.e0170375. ⟨10.1371/journal.pone.0170375⟩. ⟨hal-02628014⟩

Herminia de la Varga Pastor, François Le Tacon, Mélanie Lagoguet, Flora Todesco, Torda Varga, et al.. Five years investigation of female and male genotypes in périgord black truffle (Tuber melanosporum Vittad.) revealed contrasted reproduction strategies. Environmental Microbiology, Wiley-Blackwell, 2017, 19 (7), pp.2604-2615. ⟨10.1111/1462-2920.13735⟩. ⟨hal-01595244⟩

Claude Murat-Furminieux, Marc-André Selosse, Elisa Taschen, Laure Schneider-Maunoury, Franck Richard, et al.. Quelques considérations sur le réensemencement par ascospores des truffières à Tuber melanosporum. Le Trufficulteur Français, Fédération Française des Trufficulteurs, 2017, 98, pp.9-10. ⟨hal-01595393⟩

Heidy Schimann, Cyrille Bach, Juliette Lengellé, Eliane Louisanna, Sandra Barantal, et al.. Diversity and structure of fungal communities in neotropical rainforest soils: the effect of host recurrence. Microbial Ecology, Springer Verlag, 2017, 73 (2), pp.310-320. ⟨10.1007/s00248-016-0839-0⟩. ⟨hal-01595373⟩

François Le Tacon, Andrea Rubini, Claude Murat, Claudia Riccioni, Christophe Robin, et al.. Certainties and uncertainties about the life cycle of the Périgord black truffle (Tuber melanosporum Vittad.). Annals of Forest Science, Springer Nature (since 2011)/EDP Science (until 2010), 2016, 73 (1), pp.105-117. ⟨10.1007/s13595-015-0461-1⟩. ⟨hal-01284231⟩

Thibaut Payen, Claude Murat-Furminieux, Francis Martin. Reconstructing the evolutionary history of gypsy retrotransposons in the Périgord black truffle (Tuber melanosporum Vittad.). Mycorrhiza, Springer Verlag, 2016, 26 (6), pp.553-563. ⟨10.1007/s00572-016-0692-5⟩. ⟨hal-01351525⟩

Virginie Molinier, Claude Murat, Martina Peter, Armelle Gollotte, Herminia Varga, et al.. SSR-based identification of genetic groups within European populations of Tuber aestivum Vittad. Mycorrhiza, Springer Verlag, 2016, 26 (2), pp.99-110. ⟨10.1007/s00572-015-0649-0⟩. ⟨hal-01579571⟩

Claude Murat, Lucien Bonneau, Herminia de la Varga, Jean Marc Olivier, Sandrine Fizzala, et al.. Trapping truffle production in holes: a promising technique for improving production and unravelling truffle life cycle. Italian Journal of Mycology, 2016, ⟨10.6092/issn.2531-7342/6346⟩. ⟨hal-02989518⟩

Virginie Molinier, Claude Murat-Furminieux, Andri Baltensweiler, Ulf Büntgen, Francis Martin, et al.. Fine-scale genetic structure of natural Tuber aestivum sites in southern Germany. Mycorrhiza, Springer Verlag, 2016, 26 (8), pp.895-907. ⟨10.1007/s00572-016-0719-y⟩. ⟨hal-01496821⟩

Francis Martin, Annegret Kohler, Claude Murat, Claire Veneault-Fourrey, David S. Hibbett. Unearthing the roots of ectomycorrhizal symbioses. Nature Reviews Microbiology, Nature Publishing Group, 2016, 14 (12), pp.760-773. ⟨10.1038/nrmicro.2016.149⟩. ⟨hal-01579569⟩

Martina Peter, Annegret Kohler, Robin A. Ohm, Alan Kuo, Jennifer Kruetzmann, et al.. Ectomycorrhizal ecology is imprinted in the genome of the dominant symbiotic fungus Cenococcum geophilum. Nature Communications, Nature Publishing Group, 2016, 7, pp.1-15. ⟨10.1038/ncomms12662⟩. ⟨hal-01439098⟩

Annegret Kohler, Alan Kuo, Laszlo G. Nagy, Emmanuelle Morin, Kerrie W. Barry, et al.. Convergent losses of decay mechanisms and rapid turnover of symbiosis genes in mycorrhizal mutualists. Nature Genetics, Nature Publishing Group, 2015, 47 (4), pp.410-U176. ⟨10.1038/ng.3223⟩. ⟨hal-02639336⟩

Claude Murat-Furminieux. Forty years of inoculating seedlings with truffle fungi: past and future perspectives. Mycorrhiza, Springer Verlag, 2015, 25 (1), pp.77-81. ⟨10.1007/s00572-014-0593-4⟩. ⟨hal-01269161⟩

Virginie Molinier, Claude Murat-Furminieux, Henri Frochot, Daniel Wipf, Richard Splivallo. Fine-scale spatial genetic structure analysis of the black truffle Tuber aestivum and its link to aroma variability.. Environmental Microbiology, Wiley-Blackwell, 2015, 17 (8), pp.3039-50. ⟨10.1111/1462-2920.12910⟩. ⟨hal-01269423⟩

Thibaut Payen, Claude Murat-Furminieux, Anaïs Gigant, Emmanuelle Morin, Stéphane de Mita, et al.. A survey of genome-wide single nucleotide polymorphisms through genome resequencing in the Périgord black truffle (Tuber melanosporum Vittad.). Molecular Ecology Resources, Wiley/Blackwell, 2015, 15 (5), pp.1243-1255. ⟨10.1111/1755-0998.12391⟩. ⟨hal-01269418⟩

Anthony Levasseur, Anne Lomascolo, Olivier Chabrol, Francisco J Ruiz-Dueñas, Eva Boukhris-Uzan, et al.. The genome of the white-rot fungus [i]Pycnoporus cinnabarinus[/i]: a basidiomycete model with a versatile arsenal for lignocellulosic biomass breakdown. BMC Genomics, BioMed Central, 2014, 15 (1), pp.486. ⟨10.1186/1471-2164-15-486⟩. ⟨hal-01204353⟩

François Le Tacon, Benoit Marçais, Michel Courvoisier, Claude Murat-Furminieux, Pierre Montpied, et al.. Climatic variations explain annual fluctuations in French Perigord black truffle wholesale markets but do not explain the decrease in black truffle production over the last 48 years. Mycorrhiza, Springer Verlag, 2014, 24, pp.S115-S125. ⟨10.1007/s00572-014-0568-5⟩. ⟨hal-01268732⟩

Claude Murat-Furminieux, Herminia de la Varga Pastor, Emila Akroume, François Le Tacon, Christophe Robin, et al.. Dynamique de la reproduction sexuée.. Le Trufficulteur, 2014, 87 (2), pp.14. ⟨hal-01269190⟩

Claude Murat-Furminieux, Marc Buee, Juliette Lengellé, François Le Tacon, Emmanuelle Morin, et al.. La flore fongique des truffières. Le Trufficulteur, 2014, 88 (3), pp.14-15. ⟨hal-01269191⟩

Silvia Perotto, Marco Rodda, Alex Benetti, Fabiano Sillo, Enrico Ercole, et al.. Gene expression in mycorrhizal orchid protocorms suggests a friendly plant-fungus relationship. Planta, Springer Verlag, 2014, 239 (6), pp.1337-1349. ⟨10.1007/s00425-014-2062-x⟩. ⟨hal-01268711⟩

Alberto Orgiazzi, Valeria Bianciotto, Paola Bonfante, Stefania Daghino, Stefano Ghignone, et al.. 454 Pyrosequencing Analysis of Fungal Assemblages from Geographically Distant, Disparate Soils Reveals Spatial Patterning and a Core Mycobiome. Diversity, MDPI, 2013, Soil Quality and Ecosystem, 5 (1), pp.73-98. ⟨10.3390/d5010073⟩. ⟨hal-01577764⟩

Aurore Coince, Olivier Cael, Cyrille Bach, Juliette Lengelle, Corinne Cruaud, et al.. Below-ground fine-scale distribution and soil versus fine root detection of fungal and soil oomycete communities in a French beech forest. Fungal Ecology, Elsevier, 2013, 6 (3), pp.223-235. ⟨10.1016/j.funeco.2013.01.002⟩. ⟨hal-01578661⟩

Emmanuelle Morin, Annegret Kohler, Adam R. Baker, Marie Foulongne Oriol, Julien Lombard, et al.. Correction for Genome sequence of the button mushroom Agaricus bisporus reveals mechanisms governing adaptation to a humic-rich ecological niche (vol 109, pg 17501, 2012). Proceedings of the National Academy of Sciences of the United States of America , National Academy of Sciences, 2013, 110 (10), pp.4146-4146. ⟨10.1073/pnas.1300201110⟩. ⟨hal-01268023⟩

Virginie Molinier, Claude Murat-Furminieux, Emmanuelle Morin, Armelle Gollotte, Daniel Wipf, et al.. First identification of polymorphic microsatellite markers in the Burgundy truffle, Tuber aestivum (Tuberaceae). Applications in Plant Sciences, Wiley, 2013, 1 (2), 4 p. ⟨10.3732/apps.1200220⟩. ⟨hal-01268457⟩

Claude Murat-Furminieux, Andrea Rubini, Claudia Riccioni, Herminia de la Varga Pastor, Emila Akroume, et al.. Fine-scale spatial genetic structure of the black truffle (Tuber melanosporum) investigated with neutral microsatellites and functional mating type genes. New Phytologist, Wiley, 2013, 199 (1), pp.176-187. ⟨10.1111/nph.12264⟩. ⟨hal-01268448⟩

Marie Foulongne Oriol, Claude Murat-Furminieux, Raúl Castanera, Lucía Ramírez, Anton S. M. Sonnenberg. Genome-wide survey of repetitive DNA elements in the button mushroom Agaricus bisporus. Fungal Genetics and Biology, Elsevier, 2013, 55, pp.6-21. ⟨10.1016/j.fgb.2013.04.003⟩. ⟨hal-01268026⟩

Emilie Tisserant, Mathilde Malbreil, Alan Kuo, Annegret Kohler, Aikaterini Symeonidi, et al.. Genome of an arbuscular mycorrhizal fungus provides insight into the oldest plant symbiosis. Proceedings of the National Academy of Sciences of the United States of America , National Academy of Sciences, 2013, 110 (50), pp.20117-20122. ⟨10.1073/pnas.1313452110⟩. ⟨hal-01578663⟩

Claude Murat-Furminieux, Marc Buee. Truffes et autres champignons comestibles ectomycorhiziens. Jardins de France, 2013, 622. ⟨hal-01267896⟩

Loïc Chauveau, Claude Murat-Furminieux, Francis Martin. Au cœur de la truffe noire. Science et Avenir, 2013, 791, pp.63-65. ⟨hal-01267899⟩

Gregory Bonito, Matthew E. Smith, Michael Nowak, Rosanne A. Healy, Gonzalo Guevara, et al.. Historical Biogeography and Diversification of Truffles in the Tuberaceae and Their Newly Identified Southern Hemisphere Sister Lineage. PLoS ONE, Public Library of Science, 2013, 8 (1), ⟨10.1371/journal.pone.0052765⟩. ⟨hal-01268210⟩

Emmanuelle Morin, Annegret Kohler, Adam R. Baker, Marie Foulongne Oriol, Julien Lombard, et al.. Genome sequence of the button mushroom Agaricus bisporus reveals mechanisms governing adaptation to a humic-rich ecological niche. Proceedings of the National Academy of Sciences of the United States of America , National Academy of Sciences, 2012, 109 (43), pp.17501-17506. ⟨10.1073/pnas.1206847109⟩. ⟨hal-01267851⟩

Jessy Labbé, Claude Murat, Emmanuelle Morin, Gerald A. Tuskan, François Le Tacon, et al.. Characterization of transposable elements in the ectomycorrhizal fungus Laccaria bicolor. PLoS ONE, Public Library of Science, 2012, 7 (8), ⟨10.1371/journal.pone.0040197⟩. ⟨hal-02650918⟩

Ake Olson, Andrea Aerts, Fred Asiegbu, Lassaâd Belbahri, Ourdia Bouzid, et al.. Insight into trade-off between wood decay and parasitism from the genome of a fungal forest pathogen.. New Phytologist, Wiley, 2012, 194 (4), pp.1001-1013. ⟨10.1111/j.1469-8137.2012.04128.x⟩. ⟨hal-02649642⟩

Stefania Daghino, Claude Murat-Furminieux, Elisa Sizzano, Mariangela Girlanda, Silvia Perotto. Fungal Diversity Is Not Determined by Mineral and Chemical Differences in Serpentine Substrates. PLoS ONE, Public Library of Science, 2012, 7 (9), ⟨10.1371/journal.pone.0044233⟩. ⟨hal-01268276⟩

Francis Martin, Claude Murat-Furminieux. Le génome de la truffe noire du Périgord. Pour la Science. Dossier, Belin, 2012, 77, pp.118. ⟨hal-01267898⟩

Jean-Marc Olivier, Marc-André Selosse, Claude Murat-Furminieux. SYSTRUF à mi-parcours : les dernières informations après la réunion de Nancy. Le Trufficulteur Français, Fédération Française des Trufficulteurs, 2012, 78, pp.11-12. ⟨hal-01267897⟩

Dimitrios Floudas, Manfred Binder, Robert Riley, Kerrie Barry, Robert A. Blanchette, et al.. The paleozoic origin of enzymatic lignin decomposition reconstructed from 31 fungal genomes. Science, American Association for the Advancement of Science, 2012, 336 (6089), pp.1715-1719. ⟨10.1126/science.1221748⟩. ⟨hal-01268324⟩

Alga Zuccaro, Urs Lahrmann, Ulrich Güldener, Gregor Langen, Stefanie Pfiffi, et al.. Endophytic life strategies decoded by genome and transcriptome analyses of the mutualistic root symbiont Piriformospora indica. PLoS Pathogens, Public Library of Science, 2011, 7 (10), ⟨10.1371/journal.ppat.1002290⟩. ⟨hal-02644136⟩

Marta Vallino, Elisa Zampieri, Claude Murat, Mariangela Girlanda, Sandro Picarella, et al.. Specific regions in the Sod1 locus of the ericoid mycorrhizal fungus Oidiodendron maius from metal-enriched soils show a different sequence polymorphism. FEMS Microbiology Ecology, Wiley-Blackwell, 2011, 75 (2), pp.321 - 331. ⟨10.1111/j.1574-6941.2010.01003.x⟩. ⟨hal-02649139⟩

Claude Murat, Elisa Zampieri, Marta Vallino, Stefania Daghino, Silvia Perotto, et al.. Genomic suppression subtractive hybridization as a tool to identify differences in mycorrhizal fungal genomes. FEMS Microbiology Letters, Wiley-Blackwell, 2011, 318 (2), pp.115 - 122. ⟨10.1111/j.1574-6968.2011.02248.x⟩. ⟨hal-02644987⟩

Jessy Labbe, Claude Murat-Furminieux, Emmanuelle Morin, François Le Tacon, Francis Martin. Survey and analysis of simple sequence repeats in the Laccaria bicolor genome, with development of microsatellite markers. Current Genetics, Springer Verlag, 2011, 57 (2), pp.75 - 88. ⟨10.1007/s00294-010-0328-9⟩. ⟨hal-02643205⟩

Antonietta Mello, Chiara Napoli, Claude Murat, Emmanuelle Morin, Giuseppe Marceddu, et al.. ITS-1 versus ITS-2 pyrosequencing: a comparison of fungal populations in truffle grounds. Mycologia, Mycological Society of America, 2011, 103 (6), pp.1184-1193. ⟨10.3852/11-027⟩. ⟨hal-02645002⟩

Daniel C. Eastwood, Dimitrios Floudas, Manfred Binder, Andrzej Majcherczyk, Patrick Schneider, et al.. The Plant Cell Wall-Decomposing Machinery Underlies the Functional Diversity of Forest Fungi. Science, American Association for the Advancement of Science, 2011, 333 (6043), pp.762 - 765. ⟨10.1126/science.1205411⟩. ⟨hal-02647602⟩

Sébastien Duplessis, Christina A Cuomo, Yao-Cheng Lin, Andrea Aerts, Emilie Tisserant, et al.. Obligate biotrophy features unraveled by the genomic analysis of rust fungi. Proceedings of the National Academy of Sciences of the United States of America , National Academy of Sciences, 2011, 108 (22), pp.9166-9171. ⟨10.1073/pnas.1019315108⟩. ⟨hal-01000169⟩

Stéphane Uroz, Marc Buee, Claude Murat, Pascale Frey-Klett, Francis Martin. Pyrosequencing reveals a contrasted bacterial diversity between oak rhizosphere and surrounding soil. Environmental Microbiology Reports, Wiley, 2010, 2 (2), pp.281-288. ⟨10.1111/j.1758-2229.2009.00117.x⟩. ⟨hal-02667042⟩

Claude Murat, François Le Tacon, Jean Marc Olivier, Marc-André Selosse. Bilan des premières expériences du projet Systruf. Le Trufficulteur Français, Fédération Française des Trufficulteurs, 2010, 72, pp.7-8. ⟨hal-02667313⟩

Imed Sbissi, Mohamed Neffati, Abdellatif Boudabous, Claude Murat-Furminieux, Maher Gtari. Phylogenetic affiliation of the desert truffles Picoa juniperi and Picoa lefebvrei. Antonie van Leeuwenhoek, Springer Verlag, 2010, 98 (4), pp.429 - 436. ⟨10.1007/s10482-010-9456-y⟩. ⟨hal-02665533⟩

Francis Martin, Annegret Kohler, Claude Murat, Raffaella Balestrini, Pedro M. Coutinho, et al.. Périgord black truffle genome uncovers evolutionary origins and mechanisms of symbiosis. Nature, Nature Publishing Group, 2010, 464 (7291), pp.1033-1038. ⟨10.1038/nature08867⟩. ⟨cea-00907731⟩

Jean-Marc Olivier, Michel Courvoisier, Claude Murat. La coordination des expérimentations au COCE. Le Trufficulteur Français, Fédération Française des Trufficulteurs, 2010, 73, pp.6. ⟨hal-02654737⟩

Francis Martin, Claude Murat. Le génome de la truffe noire du Périgord. Pour la science, Société Pour la Science 2010, 392, pp.50. ⟨hal-02653460⟩

Claude Murat, Jean Marc Olivier, Francesco Paolocci, Francis Martin. Du sexe de la truffe à ses qualités organoleptiques. Le Trufficulteur Français, Fédération Française des Trufficulteurs, 2010, 73, pp.9-12. ⟨hal-02654199⟩

Marc Buee, Marlis Reich, Claude Murat, Emmanuelle Morin, R.H. Nilsson, et al.. 454 Pyrosequencing analyses of forest soils reveal an unexpectedly high fungal diversity. New Phytologist, Wiley, 2009, 184 (2), pp.449-456. ⟨10.1111/j.1469-8137.2009.03003.x⟩. ⟨hal-02667034⟩

Claude Murat, Andrea Rubini, Francesco Paolocci, Claudia Riccioni, Francis Martin. Le sexe caché des truffes. Le Trufficulteur Français, Fédération Française des Trufficulteurs, 2009, 66, pp.9-11. ⟨hal-02666770⟩

François Le Tacon, Yongjin Wang, Sylvain Jeandroz, Gregory Bonito, Claude Murat. Phylogénie et paléographie des truffes. Annales de la Société d'Horticulture et d'Histoire Naturelle de l'Hérault, Société d'Horticulture et d'Histoire Naturelle de l'Hérault, 2008, 148 (4), pp.77-94. ⟨hal-02019385⟩

Francis Martin, Claude Murat. Sex and truffles: first evidence of Perigord black truffle outcrosses. New Phytologist, Wiley, 2008, 180 (2), pp.260-263. ⟨10.1111/j.1469-8137.2008.02634.x⟩. ⟨hal-02655085⟩

Claude Murat, Elisa Zampieri, Alfredo Vizzini, Paola Bonfante. La truffe noire est-elle menacée par une espèce exotique ?. Le Trufficulteur Français, Fédération Française des Trufficulteurs, 2008, 64, pp.15-16. ⟨hal-02659659⟩

Sylvain Jeandroz, Claude Murat, Yongjin Wang, Paola Bonfante, François Le Tacon. Molecular phylogeny and historical biogeography of the genus Tuber, the ‘true truffles’. Journal of Biogeography, Wiley, 2008, 35 (5), pp.815-829. ⟨10.1111/j.1365-2699.2007.01851.x⟩. ⟨hal-02017356⟩

Yongjin Wang, Zhu Ming Tan, Claude Murat, Sylvain Jeandroz, François Le Tacon. Molecular taxonomy of Chinese truffles belonging to the Tuber rufum and Tuber puberulum groups. Fungal Diversity, Springer, 2007, 24, pp.301-328. ⟨hal-02019514⟩

François Le Tacon, Sylvain Jeandroz, Claude Murat, Yongjin Wang. Répartition et histoire des truffes dans l'hémisphère nord. INRA Mensuel, 2006, pp.11-15. ⟨hal-02018936⟩

Yongjin Wang, Zhu Ming Tan, da Cheng Zhang, Claude Murat, Sylvain Jeandroz, et al.. Phylogenetic and populational study of the Tuber indicum complex. Mycological Research, Elsevier, 2006, 110 (9), pp.1034-1045. ⟨10.1016/j.mycres.2006.06.013⟩. ⟨hal-02659178⟩

Yongjin Wang, Zhu Ming Tan, da Cheng Zhang, Claude Murat, Sylvain Jeandroz, et al.. Phylogenetic relationships between Tuber pseudoexcavatum, a Chinese truffle, and other Tuber species based on parsimony and distance analysis of four different gene sequences. FEMS Microbiology Letters, Wiley-Blackwell, 2006, 259 (2), pp.269-281. ⟨10.1111/j.1574-6968.2006.00283.x⟩. ⟨hal-02659211⟩

Marc Buee, Erwin Sentausa, Claude Murat. Molecular technologies applied to the ecology of ectomycorrhizal communities. Francis Martin. Molecular Mycorrhizal symbiosis, John Wiley & Sons, Inc., pp.323-339, 2016, 9781118951446. ⟨hal-01950227⟩

Claude Murat, Francis Martin. Truffle Genomics: Investigating an Early Diverging Lineage of Pezizomycotina. Alessandra Zambonelli; Mirco Iotti; Claude Murat. True Truffle (Tuber spp.) in the World: Soil Ecology, Systematics and Biochemistry, Springer, pp.137-149, 2016, 978-3-319-31436-5. ⟨hal-01950278⟩

Juan Chen, Claude Murat, Peter Oviatt, Yongjin Wang, François Le Tacon. The Black Truffles Tuber melanosporum and Tuber indicum. Alessandra Zambonelli; Mirco Iotti; Claude Murat. True Truffle (Tuber spp.) in the World: Soil Ecology, Systematics and Biochemistry, Springer, pp.19-32, 2016, 978-3-319-31436-5. ⟨hal-01950262⟩

Herminia de la Varga Pastor, Claude Murat-Furminieux. Identification and In Situ Distribution of a Fungal Gene Marker: The Mating Type Genes of the Black Truffle. Microbial Environmental Genomics (MEG), 1399, Springer, 321 p., 2016, Methods in Molecular Biology, 978-1-4939-3369-3. ⟨10.1007/978-1-4939-3369-3_8⟩. ⟨hal-01379659⟩

Thibaut Payen, Claude Murat-Furminieux, Gregory Bonito. Truffle phylogenomics: New insights into truffle evolution and truffle life cycle. Fungi, 70, Academic Press - Elsevier, 488 p., 2014, Advances in Botanical Research, 978-0-12-397940-7. ⟨10.1016/B978-0-12-397940-7.00007-0⟩. ⟨hal-01268873⟩

Claude Murat, Thibaut Payen, Denis Petitpierre, Jessy Labbe. Repeated Elements in Filamentous Fungi with a Focus on Wood-Decay Fungi. Ecological Genomics of the Fungi, John Wiley & Sons, Inc, pp.21-40, 2013, 9781119946106. ⟨hal-01941029⟩

Claude Murat, Antonietta Mello, Simona Abbà, Paola Bonfante. Edible mycorrhizal fungi : Ecology, Genetic and Functional Diversity. Mycorrhiza: State of the Art, Genetics and Molecular Biology, Eco-Function, Biotechnology, Eco-Physiology, Structure and Systematics, Springer Verlag, pp.707-732, 2010, 978-3-540-78826-3. ⟨hal-02821846⟩

Annegret Kohler, Alan Kuo, Laszlo G Nagy, Emmanuelle Morin, Kerrie W Barry, et al.. Convergent losses of decay mechanisms and rapid turnover of symbiosis genes in mycorrhizal mutualists. 2015, pp.410-5. ⟨10.1038/ng.3223⟩. ⟨hal-01140842⟩

Herminia de la Varga, François Le Tacon, M. Lagoguet, Flora Todesco, T. Varga, et al.. Five years of research revealed the Périgord black truffle (Tuber melanosporum Vittad.) sexual reproduction strategy. 8th International Workshop on Edible Mycorrhizal Mushrooms (IWEMM8), Oct 2016, CAHORS, France. ⟨hal-02871313⟩

Virginie Molinier, Claude Murat-Furminieux, Emmanuelle Morin, Armelle Gollotte, Daniel Wipf, et al.. First identification of polymorphic microsatellite markers in the Burgundy truffle, Tuber aestivum (Tuberaceae). 3. Annual Joint Meeting on Plant Microbe Interactions, Sep 2014, Dijon, France. ⟨hal-01268760⟩

Stéphane Uroz, Marc Buee, Francis Martin, Aurore Coince, Claude Murat, et al.. Metagenomics of the forest soil microbiome: from diversity to function. 1. EcoFINDERS WP3 workshop : 'Strategies and tools for sampling, DNA extraction, DNA sequencing and bioinformatics, 2011, Nancy, France. ⟨hal-02804475⟩

Virginie Molinier, Daniel Wipf, Claude Murat-Furminieux, R. Splivallo, S. Egli, et al.. Treasures of the forest : Towards understanding life history of Tuber aestivum. 8. International Conference on Mycorrhiza (ICOM8), Aug 2015, Flagstaff, United States. 216 p., 2015. ⟨hal-02740088⟩

Claudia Riccioni, Claude Murat-Furminieux, Herminia de la Varga Pastor, Flora Todesco, Andrea Rubini, et al.. Comparative genomics and population genetics provide new insights on the life cycle of the black truffle of Périgord (Tuber melanosporum Vittad.). 8. International Conference on Mycorrhiza (ICOM8), Aug 2015, Northern Arizona University, United States. 2015. ⟨hal-02799380⟩

Claude Murat, Herminia de la Varga, Emila Akroume, François Le Tacon, Christophe Robin, et al.. Structure génétique spatiale de la truffe noire du Périgord (Tuber melanosporum) dans une plantation productive analysée par marqueurs microsatellites et les gènes de compatibilité sexuelle. 10. Rencontres de Phytopathologie - Mycologie. Journées Jean Chevaugeon, Jan 2014, Aussois, France. 2014, Journées Jean Chevaugeon 2014. 10es Rencontres de phytopathologie-mycologie de la Société Française de Phytopahologie (SFP). 27 au 31 janvier 2014. Centre Paul Langevin, CAES du CNRS Aussois (Savoie) – France. ⟨hal-02743213⟩

Virginie Molinier, Claude Murat-Furminieux, Emmanuelle Morin, Patrick Wincker, Armelle Gollotte, et al.. Genetic diversity of Tuber aestivum / uncinatum. ALPHY Meeting, Mar 2012, Banyuls sur Mer, France. 2012. ⟨hal-01268765⟩

Francis Martin, Claude Murat, Francesco Paolocci, Andrea Rubini, Claudia Riccioni, et al.. Molecular method for the identification of mating typegenes of truffles species. Patent n° : WO2012/032098. 2012, 63 p. ⟨hal-02812032⟩