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Advanced Cataloging of Lysine-63 Polyubiquitin Networks by Genomic, Interactome, and Sensor-based Proteomic Analyses

Natali Romero-Barrios , Dario Monachello , Ulla Dolde , Aloysius Wong , Hélène San Clemente , et al.
The Plant cell, 2020, ⟨10.1105/tpc.19.00568⟩
Article dans une revue hal-02367570v1

Systematic study of subcellular localization of Arabidopsis PPR proteins confirms a massive targeting to organelles

Jean Colcombet , Mauricio Lopez-Obando , Laure Heurtevin , Clément Bernard , Karine Martin , et al.
RNA Biology, 2013, 10 (9), pp.1557-1575. ⟨10.4161/rna.26128⟩
Article dans une revue hal-02645879v1

The cytidine deaminase signature HxE(x)(n)CxxC of DYW1 binds zinc and is necessary for RNA editing of ndhD-1

Clement Boussardon , Alexandra Avon , Peter Kindgren , Charles S. Bond , Michael Challenor , et al.
New Phytologist, 2014, 203 (4), pp.1090 - 1095. ⟨10.1111/nph.12928⟩
Article dans une revue hal-01204158v1

Predotar: a tool for rapidly screening proteomes for N-terminal targeting sequences

Ian Small , Nemo Peeters , F. Legeai , Claire Lurin
Proteomics, 2004, 4 (6), pp.1581-1590. ⟨10.1002/pmic.200300776⟩
Article dans une revue istex hal-02683504v1
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The Analysis of the Editing Defects in the dyw2 Mutant Provides New Clues for the Prediction of RNA Targets of Arabidopsis E+-Class PPR Proteins

Bastien Malbert , Matthias Burger , Mauricio Lopez Obando , Kévin Baudry , Alexandra Launay-Avon , et al.
Plants, 2020, 9 (2), pp.280. ⟨10.3390/plants9020280⟩
Article dans une revue hal-02628277v1

CLB19, a pentatricopeptide repeat protein required for editing ofrpoAandclpPchloroplast transcripts

Anne Laure Chateigner-Boutin , Maricela Ramos-Vega , Arturo Guevara-Garci­a , Charles Andres , Maria de La Luz Gutierrez-Nava , et al.
Plant Journal, 2008, 56 (4), pp.590-602. ⟨10.1111/j.1365-313X.2008.03634.x⟩
Article dans une revue hal-02658629v1

Two Interacting Proteins Are Necessary for the Editing of the NdhD-1 Site in Arabidopsis Plastids

Clement Boussardon , Veronique Salone , Alexandra Avon , Richard R. Berthomé , Kamel Hammani , et al.
The Plant cell, 2012, 24 (9), pp.3684 - 3694. ⟨10.1105/tpc.112.099507⟩
Article dans une revue hal-02649239v1

Evidence for Network Evolution in an Arabidopsis Interactome Map

Pascal Braun , Anne-Ruxandra Carvunis , Benoit Charloteaux , Matija Dreze , Joseph R. Ecker , et al.
Science, 2011, 333 (6042), pp.601 - 607. ⟨10.1126/science.1203877⟩
Article dans une revue hal-02651738v1

Bioinformatic analysis of chloroplast gene expression and RNA posttranscriptional maturations using RNA Sequencing

Bastien Malbert , Guillem Rigaill , Véronique Brunaud , Claire Lurin , Etienne Delannoy
Plastids, 1829, Humana Press Inc., pp.16, 2018, Methods in Molecular Biology, 978-1-4939-8654-5; 978-1-4939-8653-8. ⟨10.1007/978-1-4939-8654-5_19⟩
Chapitre d'ouvrage hal-02788517v1

Versatile gene-specific sequence tags for Arabidopsis functional genomics: transcript profiling and reverse genetics applications

Pierre Hilson , Sebastien Aubourg , Alexandra Avon , Frédérique Bitton , Michel M. Caboche , et al.
Genome Research, 2004, 14 (10b), pp.2176-2189
Article dans une revue hal-02673981v1
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Adenylates regulate Arabidopsis plastidial thioredoxin activities through the binding of a CBS domain protein.

Kevin Baudry , Félix Barbut , Séverine Domenichini , Damien Guillaumot , Mai Pham Thy , et al.
Plant Physiology, 2022, 189 (4), pp.2298-2314. ⟨10.1093/plphys/kiac199⟩
Article dans une revue hal-03866164v1
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Retrograde signals from mitochondria reprogramme skoto-morphogenesis in Arabidopsis thaliana via alternative oxidase 1a

Livia Merendino , Florence Courtois , Björn Grübler , Olivier Bastien , Vera Straetmanns , et al.
Philosophical Transactions of the Royal Society B: Biological Sciences, 2020, 375 (1801), pp.20190567. ⟨10.1098/rstb.2019.0567⟩
Article dans une revue hal-02971816v1

Disruption of putative anion channel gene AtCLC-a in Arabidopsis suggests a role in the regulation of nitrate content

D. Geelen , Claire Lurin , David D. Bouchez , J.M. Frachisse , François Lelièvre , et al.
Plant Journal, 2000, 21 (3), pp.259-267
Article dans une revue hal-02696815v1

Plant Protein Interactomes

Pascal Braun , Sebastien S. Aubourg , Jelle van Leene , Geert de Jaeger , Claire Lurin
Annual Review of Plant Biology, 2013, 64, pp.161 - 187. ⟨10.1146/annurev-arplant-050312-120140⟩
Article dans une revue hal-02647686v1
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EffectorK, a comprehensive resource to mine for Ralstonia, Xanthomonas, and other published effector interactors in the Arabidopsis proteome

Manuel Gonzalez‐fuente , Sébastien Carrere , Dario Monachello , Benjamin G Marsella , Anne‐claire Cazalé , et al.
Molecular Plant Pathology, 2020, 21 (10), pp.1257-1270. ⟨10.1111/mpp.12965⟩
Article dans une revue hal-03052440v1
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Analysis of the DNA-Binding Activities of the Arabidopsis R2R3-MYB Transcription Factor Family by One-Hybrid Experiments in Yeast

Zsolt Kelemen , Alvaro Sebastian , Wenjia Xu , Damaris Grain , Fabien Salsac , et al.
PLoS ONE, 2015, 10 (10), pp.e0141044. ⟨10.1371/journal.pone.0141044⟩
Article dans une revue hal-01837546v1

Characterising the plant organellar RNA editing machinery

Anne-Laure Chateigner Boutin , Veronique Salone , Anne Bersoult , Aaron Yap , Kamel Hammani , et al.
Leopoldina-Symposium “Molecular Genetics of Chloroplasts and Mitochondria”, Sep 2009, Berlin, Germany. , 2009
Poster de conférence hal-02824832v1
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Genome-wide analysis of Arabidopsis pentatricopeptide repeat proteins reveals their essential role in organelle biogenesis

Claire Lurin , Charles Andres , Sebastien Aubourg , M. Bellaoui , Frédérique Bitton , et al.
The Plant cell, 2004, 16 (7), pp.1-15
Article dans une revue hal-02679636v1

CLC-Nt1, a putative chloride channel protein of tobacco, co-localizes with mitochondrial membrane markers

Claire Lurin , J. Güclü , Catherine Cheniclet , J.P. Carde , H. Barbier-Brigoo , et al.
Biochemical Journal, 2000, 348, pp.291-295. ⟨10.1042/bj3480291⟩
Article dans une revue hal-02696468v1
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Current status of the multinational Arabidopsis community

Keith Adams , Wagner Araújo , Sebastien Aubourg , Sacha Baginsky , Erica Bakker , et al.
Plant Direct, 2020, 4 (7), pp.e00248. ⟨10.1002/pld3.248⟩
Article dans une revue hal-02927028v1

Characterising the RNA editing machinery and function in plants

Anne-Laure Chateigner Boutin , Veronique Salone , Anne Bersoult , Charles Andres , Aaron Yap , et al.
Gordon Research Conference on RNA Editing: "Roles of RNA and DNA Editing and Modification in Cellular Function", Jan 2009, Galveston, Texas, United States. , 2009
Poster de conférence hal-02818701v1
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Two interacting PPR proteins are major Arabidopsis editing factors in plastid and mitochondria

Damien Guillaumot , Mauricio Lopez Obando , Kévin Baudry , Alexandra Launay-Avon , Guillem Rigaill , et al.
Proceedings of the National Academy of Sciences of the United States of America, 2017, 114 (33), pp.8877-8882. ⟨10.1073/pnas.1705780114⟩
Article dans une revue hal-01606226v1

Synthetic data sets for the identification of key ingredients for RNA-seq differential analysis

Guillem Rigaill , Sandrine Balzergue , Véronique Brunaud , Eddy Blondet , Andrea Rau , et al.
Briefings in Bioinformatics, 2016, 19 (1), pp.65-76. ⟨10.1093/bib/bbw092⟩
Article dans une revue hal-01595551v1

Using RNA editing mutants as tools to study coordination of nuclear and organellar gene expression

Anne-Laure Chateigner Boutin , Veronique Salone , Anne Bersoult , Aaron Yap , Kamel Hammani , et al.
1. International Conference on Retrograde Signaling in Plants, Oct 2009, Berlin, Germany. , 2009
Poster de conférence hal-02820227v1