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Christophe PLOMION

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Directeur d'Unité Equipe E4E
Directeur de recherche - HDR Directeur d'Unité Equipe E4E

Publications

antoine-kremer
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Oak stands along an elevation gradient have different molecular strategies for regulating bud phenology

Gregoire Le Provost , Céline Lalanne , Isabelle Lesur , Jean-Marc Louvet , Sylvain Delzon
BMC Plant Biology, 2023, 23 (108), ⟨10.1186/s12870-023-04069-2⟩
Article dans une revue hal-04003618v1

Tracking population structure and phenology through time using ancient genomes from waterlogged white oak wood

Stefanie Wagner , Andaine Seguin-Orlando , Jean-Charles Leplé , Thibault Leroy , Céline Lalanne
Molecular Ecology, 2023, ⟨10.1111/mec.16859⟩
Article dans une revue hal-04158430v1
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Genome‐wide evolutionary response of European oaks during the Anthropocene

Dounia Saleh , Jun Chen , Jean-Charles Leplé , Thibault Leroy , Laura Truffaut
Evolution Letters, 2022, 6 (1), pp.4-20. ⟨10.1002/evl3.269⟩
Article dans une revue hal-03553889v1
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High-quality SNPs from genic regions highlight introgression patterns among European white oaks (Quercus petraea and Q. robur)

Tiange Lang , Pierre P. Abadie , Valérie Léger , Thibaut Decourcelle , Jean-Marc Frigerio
Peer Community In Forest & Wood Sciences, 2021, pp.1-33. ⟨10.1101/388447⟩
Article dans une revue hal-01985021v1

Genomic landscape of the global oak phylogeny

Andrew Hipp , Paul Manos , Marlene Hahn , Michael Avishai , Catherine Bodénès
New Phytologist, 2020, 226 (4), pp.1198-1212. ⟨10.1111/nph.16162⟩
Article dans une revue hal-03162542v1
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Oak symbolism in the light of genomics

Thibault Leroy , Christophe Plomion , Antoine Kremer
New Phytologist, 2020, 26 (4), pp.1012-1017. ⟨10.1111/nph.15987⟩
Article dans une revue hal-02625840v1
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Évolution passée et contemporaine des chênes

Antoine Kremer , Christophe Plomion , Thibault Leroy , Hermine Alexandre , Laura Truffaut
Revue forestière française, 2020, 72 (4), pp.297-318. ⟨10.20870/revforfr.2020.5331⟩
Article dans une revue hal-03206333v1

Adaptive introgression as a driver of local adaptation to climate in European white oaks

Thibault Leroy , Jean-Marc Louvet , Céline Lalanne , Grégoire Le Provost , Karine Labadie
New Phytologist, 2020, 226 (4), pp.1171-1182. ⟨10.1111/nph.16095⟩
Article dans une revue hal-02627923v1
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Paleogenomics: reconstruction of plant evolutionary trajectories from modern and ancient DNA

Caroline Pont , Stefanie Wagner , Antoine Kremer , Ludovic Orlando , Christophe Plomion
Genome Biology, 2019, 20 (1), pp.1-17. ⟨10.1186/s13059-019-1627-1⟩
Article dans une revue hal-02278824v1
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Massive postglacial gene flow between European white oaks uncovered genes underlying species barriers

Thibault Leroy , Quentin Rougemont , Jean-Luc Dupouey , Catherine Bodenes , Céline Lalanne
New Phytologist, 2019, online fisrt, pp.1-15. ⟨10.1111/nph.16039⟩
Article dans une revue hal-02622295v1
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High-Throughput DNA sequencing of ancient wood

Stefanie Wagner , Frédéric Lagane , Andaine Seguin-Orlando , Mikkel Schubert , Thibault Leroy
Molecular Ecology, 2018, 27 (5), pp.1138-1154. ⟨10.1111/mec.14514⟩
Article dans une revue hal-01783724v1

Gaining a global perspective on Fagaceae genomic diversification and adaptation

Charles H. Cannon , Oliver Brendel , Min Deng , Andrew L. Hipp , Antoine Kremer
New Phytologist, 2018, 218 (3), pp.894-897. ⟨10.1111/nph.15101⟩
Article dans une revue hal-02620604v1
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Oak genome reveals facets of long lifespan

Christophe Plomion , Jean-Marc Aury , Joelle Amselem , Thibault Leroy , Florent Murat
Nature Plants, 2018, 4 (7), pp.440-452. ⟨10.1038/s41477-018-0172-3⟩
Article dans une revue hal-01820559v1
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Hardwood tree genomics: unlocking woody plant biology

Gerald A. Tuskan , Andrew T. Groover , Jeremy Schmutz , Stephen Paul Difazio , Alexander Myburg
Frontiers in Plant Science, 2018, 9, pp.1-9. ⟨10.3389/fpls.2018.01799⟩
Article dans une revue hal-02622509v1
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Development of target sequence capture and estimation of genomic relatedness in a mixed oak stand

Isabelle Lesur Kupin , Hermine Alexandre , Christophe Boury , Emilie Chancerel , Christophe Plomion
Frontiers in Plant Science, 2018, 9, pp.1-16. ⟨10.3389/fpls.2018.00996⟩
Article dans une revue hal-02628743v1

X-ray computed tomography to decipher the genetic architecture of tree branching traits: oak as a case study

Jialin Song , Oliver Brendel , Catherine Bodenes-Brezard , Christophe Plomion , Antoine Kremer
Tree Genetics and Genomes, 2017, 13 (5), pp.1-15. ⟨10.1007/s11295-016-1083-y⟩
Article dans une revue hal-01530800v1
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Extensive recent secondary contacts between four European white oak species

Thibault Leroy , Camille Roux , Laure Villate , Catherine Bodénès , Jonathan Romiguier
New Phytologist, 2017, 214 (2), pp.865-878. ⟨10.1111/nph.14413⟩
Article dans une revue hal-01608621v1

Genomic resources notes accepted 1 August 2015 - 31 September 2015

. Genomic Resources Development Consortium , Annegret Kohler , Antoine Kremer , Grégoire G. Le Provost , Isabelle Lesur Kupin Lesur
Molecular Ecology Resources, 2016, 16 (1), pp.377-377. ⟨10.1111/1755-0998.12482⟩
Article dans une revue hal-02630738v1
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High-density linkage mapping and distribution of segregation distortion regions in the oak genome

Catherine Bodenes-Brezard Bodénès , Emilie E. Chancerel , François Ehrenmann , Antoine Kremer , Christophe Plomion
DNA Research, 2016, 23 (2), pp.115-124. ⟨10.1093/dnares/dsw001⟩
Article dans une revue hal-02635371v1

Decoding the oak genome: public release of sequence data, assembly, annotation and publication strategies.

Christophe Plomion , Jean-Marc Aury , Joëlle Amselem , Tina Alaeitabar , Valérie Barbe
Molecular Ecology Resources, 2015, 16 (1), pp.254-265. ⟨10.1111/1755-0998.12425⟩
Article dans une revue hal-01579667v1

A linkage disequilibrium perspective on the genetic mosaic of speciation in two hybridizing Mediterranean white oaks

P. G. Goicoechea , A. Herrán , Jonathan Durand , Catherine Bodenes-Brezard Bodénès , Christophe Plomion
Heredity, 2015, 114 (4), pp.373-386. ⟨10.1038/hdy.2014.113⟩
Article dans une revue hal-02631883v1

Single-nucleotide polymorphism discovery and validation in high-density SNP array for genetic analysis in European white oaks

Camille Lepoittevin , Catherine Bodenes-Brezard Bodénès , Emilie E. Chancerel , Laure Villate , Tiange Lang
Molecular Ecology Resources, 2015, 15 (6), pp.1446-1459. ⟨10.1111/1755-0998.12407⟩
Article dans une revue hal-02635881v1

A unigene set for European beech (Fagus sylvatica L.) and its use to decipher the molecular mechanisms involved in dormancy regulation

Isabelle Lesur Kupin Lesur , Alison Bechade , Céline C. Lalanne , Christophe C. Klopp , Céline Noirot
Molecular Ecology Resources, 2015, 15 (5), pp.1192-1204. ⟨10.1111/1755-0998.12373⟩
Article dans une revue hal-02640346v1
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The oak gene expression atlas: insights into Fagaceae genome evolution and the discovery of genes regulated during bud dormancy release

Isabelle Lesur , Grégoire G. Le Provost , Pascal Bento , Corinne da Silva , Jean-Charles Leplé
BMC Genomics, 2015, 16 (1), pp.112. ⟨10.1186/s12864-015-1331-9⟩
Article dans une revue hal-02285504v1
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Transcriptional profiling of bud dormancy induction and release in oak by next-generation sequencing

Saneyoshi Ueno , Christophe C. Klopp , Jean-Charles Leplé , Jérémy Derory , Céline Noirot
BMC Genomics, 2013, 14, 15 p. ⟨10.1186/1471-2164-14-236⟩
Article dans une revue hal-02650124v1

Genetic mapping of EST-derived simple sequence repeats (EST-SSRs) to identify QTL for leaf morphological characters in a Quercus robur full-sib family

Oliver Gailing , Catherine Bodenes-Brezard Bodénès , Reiner Finkeldey , Antoine Kremer , Christophe Plomion
Tree Genetics and Genomes, 2013, 9 (5), pp.1361-1367. ⟨10.1007/s11295-013-0633-9⟩
Article dans une revue hal-02646913v1

Genomics of Fagaceae

Antoine Kremer , Albert G. Abbott , John E. Carlson , Paul S. Manos , Christophe Plomion
Tree Genetics and Genomes, 2012, 8 (3), pp.583-610. ⟨10.1007/s11295-012-0498-3⟩
Article dans une revue hal-02644452v1

Role of waterlogging-responsive genes in shaping interspecific differentiation between two sympatric oak species

Grégoire Le Provost , Cécile Sulmon , Jean-Marc Frigerio , Catherine Bodénès , Antoine Kremer
Tree Physiology, 2012, 32 (2), pp.119-134. ⟨10.1093/treephys/tpr123⟩
Article dans une revue hal-00686932v1
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Comparative mapping in the Fagaceae and beyond with EST-SSRs

Catherine Bodenes-Brezard Bodénès , Emilie E. Chancerel , Oliver O. Gailing , Giovanni G. G. G. Vendramin , Francesca F. Bagnoli
BMC Plant Biology, 2012, 12 (153), 40 p. ⟨10.1186/1471-2229-12-153⟩
Article dans une revue hal-00964224v1

QST < FST as a signature of canalization

Jean-Baptiste J.-B. Lamy , Christophe Plomion , Antoine Kremer , Sylvain S. Delzon
Molecular Ecology, 2012, 21 (23), pp.5646-5655
Article dans une revue hal-02643592v1

A sample view of the pedunculate oak (Quercus robur) genome from the sequencing of hypomethylated and random genomic libraries

Isabelle Lesur , Jérôme J. Durand , Federico Sebastiani , Niclas Gyllenstrand , Catherine Bodenes-Brezard Bodénès
Tree Genetics and Genomes, 2011, 7 (6), pp.1277-1285. ⟨10.1007/s11295-011-0412-4⟩
Article dans une revue hal-02644223v1
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Development and implementation of a highly-multiplexed SNP array for genetic mapping in maritime pine and comparative mapping with loblolly pine

Emilie E. Chancerel , Camille Lepoittevin , Grégoire G. Le Provost , Yao-Cheng Lin , Juan Pablo Jaramillo-Correa
BMC Genomics, 2011, 12, 14 p. ⟨10.1186/1471-2164-12-368⟩
Article dans une revue hal-02649406v1
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Detection of genes involved in bud phenology in sessile oak (Quercus petraea Matt. Liebl) combining digital expression analysis and Q-PCR

Saneyoshi Ueno , Christophe C. Klopp , Céline Noirot , Valérie V. Léger , Elodie Prince
BMC Proceedings, 2011, 5 (Suppl. 7), pp.1-2. ⟨10.1186/1753-6561-5-S7-P20⟩
Article dans une revue hal-02641988v1

Forest ecosystem genomics and adaptation : EVOLTREE conference report

Antoine Kremer , Barbara Vinceti , Ricardo Alia , Jaroslav Burczyk , Stephen Cavers
Tree Genetics and Genomes, 2011, 7 (4), pp.869-875. ⟨10.1007/s11295-011-0378-2⟩
Article dans une revue hal-02645944v1
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Analysis of BAC end sequences in oak, a keystone forest tree species, providing insight into the composition of its genome

Patricia P. Faivre-Rampant , Isabelle Lesur , Clément Boussardon , Frederique Bitton , Marie-Laure Martin-Magniette
BMC Genomics, 2011, 12, 13 p. ⟨10.1186/1471-2164-12-292⟩
Article dans une revue hal-02646702v1

Characterisation and natural variation of a dehydrin gene in Quercus petraea (Matt.) Liebl.

B. Vornam , O. Gailing , Jérémy Derory , Christophe Plomion , Antoine Kremer
Plant Biology, 2011, 13 (6), pp.881 - 887. ⟨10.1111/j.1438-8677.2011.00446.x⟩
Article dans une revue hal-02647308v1
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A fast and cost-effective approach to develop and map EST-SSR markers: oak as a case study.

Jérôme J. Durand , Catherine Bodénès , Emilie Chancerel , Jean-Marc Frigerio , Giovanni Vendramin
BMC Genomics, 2010, 11 (570), pp.570. ⟨10.1186/1471-2164-11-570⟩
Article dans une revue hal-00645935v1
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Bioinformatic analysis of ESTs collected by Sanger and pyrosequencing methods for a keystone forest tree species: oak.

Saneyoshi Ueno , Grégoire Le Provost , Valérie Léger , Christophe C. Klopp , Céline Noirot
BMC Genomics, 2010, 11, pp.650. ⟨10.1186/1471-2164-11-650⟩
Article dans une revue hal-00645933v1

Transcriptome analysis of bud burst in sessile oak (Quercus petraea)

Jérémy Derory , Patrick P. Léger , Virginie V. Garcia , Jacques Schaeffer , Marie-Theres Hauser
New Phytologist, 2006, 170 (4), pp.723-738. ⟨10.1111/j.1469-8137.2006.01721.x⟩
Article dans une revue hal-02666078v1
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Quantitative trait loci mapping for vegetative propagation in pedunculate oak

Caroline Scotti-Saintagne , Evangelista Bertocchi , Teresa Barreneche , Antoine Kremer , Christophe Plomion
Annals of Forest Science, 2005, 62 (4), pp.369-374
Article dans une revue hal-00883894v1

Quantitative trait loci mapping for vegetative propagation in pedunculate oak

Caroline Scotti-Saintagne , Evangelista Bertocchi , Teresa Barreneche , Antoine Kremer , Christophe Plomion
Annals of Forest Science, 2005, 62 (4), pp.369-374. ⟨10.1051/forest:2005032⟩
Article dans une revue hal-02680270v1

Detection of quantitative trait loci controlling bud burst and height growth in Quercus robur L.

Caroline Scotti-Saintagne , Catherine Bodenes-Brezard Bodénès , Teresa Barreneche , Evangelista Bertocchi , Christophe Plomion
TAG Theoretical and Applied Genetics, 2004, 109 (8), pp.1648-1659. ⟨10.1007/s00122-004-1789-3⟩
Article dans une revue hal-02681266v1

Comparative mapping between Quercus and Castanea using simple-sequence repeats (SSRs)

Teresa Barreneche , M. Casasoli , Katharina Russell , A. Akkak , H. Meddour
TAG Theoretical and Applied Genetics, 2004, 108 (3), pp.558-566
Article dans une revue hal-02678967v1

Distribution of genomic regions differentiating oak species assessed by QTL detection

Caroline Scotti-Saintagne , Catherine Bodenes-Brezard Bodénès , Teresa Barreneche , David Pot , Christophe Plomion
Heredity, 2004, 92 (1), pp.20-30. ⟨10.1038/sj.hdy.6800358⟩
Article dans une revue hal-02678139v1

Comparative mapping between Quercus and Castanea using simple-sequence repeats (SSRs)

Teresa Barreneche , M. Casasoli , K. Russel , A. Akkak , H. Meddour
TAG Theoretical and Applied Genetics, 2004, 108 (3), pp.558-566. ⟨10.1007/s00122-003-1462-2⟩
Article dans une revue hal-02679023v1

Comparison of genetic diversity estimates within and among populations of maritime pine using chloroplast simple-sequence repeat and amplified fragment lenght polymorphism data

M.M. Ribeiro , Stéphanie Mariette , G.G. Vendramin , A.E. Szmidt , Christophe Plomion
Molecular Ecology, 2002, 11, pp.869-877
Article dans une revue hal-02676166v1

Genetic diversity within and among Pinus pinaster populations: comparison between AFLP and microsatellite markers

Stéphanie Mariette , D. Chagné , C. Lézier , Patrick Pastuszka , Annie Raffin
Heredity, 2001, 86, pp.469-479
Article dans une revue hal-02676475v1

Separation and characterization of needle and xylem maritime pine proteins

P. Costa , Cédric Pionneau , G. Bauw , Christian Dubos , N. Bahrmann
Electrophoresis, 1999, 20 (4-5), pp.1098-1108
Article dans une revue hal-02687346v1

Developing SSCP markers in two Pinus species

Christophe Plomion , P. Hurme , J.M. Frigerio , M. Ridolfi , D. Pot
Molecular Breeding, 1999, 5 (1), pp.21-31
Article dans une revue hal-02688015v1
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Quantitative trait dissection analysis in Eucalytus using RAPD markers: 2. Linkage disequilibrium in a factorial design between E. urophylle and E. Grandis.

Daniel Verhaegen , Christophe Plomion , Mireille Poitel , Paulo Costa , Antoine Kremer
Forest genetics, 1998, 5 (1), pp.61-69
Article dans une revue cirad-00845393v1

A genetic linkage map of Quercus robur L. (pedunculate oak) based on RAPD, scar, microsatellite, minisatellite, isozyme and 5S rDNA markers

Teresa Barreneche , Catherine Bodénès , Christian Lexer , J.F. Trontin , S. Fluch
TAG Theoretical and Applied Genetics, 1998, 97, pp.1090-1103
Article dans une revue hal-02694736v1

Quantitative trait dissection analysis in Eucalyptus using RAPD markers : 2. Linkage disequilibrium in a factorial design between E.urophylla and E. grandis

D. Verhaegen , Christophe Plomion , M. Poitel , P. Costa , Antoine Kremer
Tree seed working group news bulletin-Canadian Forest Genetics Association, 1998, 5 (1), pp.61-69
Article dans une revue hal-02698968v1

Water-deficit-responsive proteins in maritime pine

P. Costa , Nasser Bahrman , J.M. Frigerio , Antoine Kremer , Christophe Plomion
Plant Molecular Biology, 1998, 38, pp.587-596
Article dans une revue hal-02692390v1

Contribution of two-dimensional electrophoresis of proteins to maritime pine genetics

Nasser Bahrman , Christophe Plomion , R.J. Petit , Antoine Kremer
Annales des sciences forestières, 1997, 54 (3), pp.225-236
Article dans une revue hal-02685875v1

Quantitative trait dissection analysis in Eucalyptus using RAPD markers : 1. Detection of QTL in interspecific hybrid progeny, stability of QTL expression across differnet ages

D. Verhaegen , Christophe Plomion , J.M. Gion , M. Poitel , P. Costa
TAG Theoretical and Applied Genetics, 1997, 95 (4), pp.597-608
Article dans une revue hal-02690381v1

Genetic architecture of leaf specialized metabolites natural variation within sessile oak populations

Domitille Coq--Etchegaray , Stéphane Bernillon , Grégoire Le Provost , Antoine Kremer , Alexis Ducousso
2. EvolTree Conference, Alexandru Lucian Curtu, UNITBV ; Elena Ciocirlan, UNITBV ; Nicolae Sofletea, UNITBV, Sep 2023, Brasov, Romania. ⟨10.1101/2023.04.07.536008⟩
Communication dans un congrès hal-04207231v1
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Genetic architecture of leaf specialized metabolites in sessile oak (Quercus petraea)

Domitille Coq--Etchegaray , Stéphane Bernillon , Grégoire Le Provost , Antoine Kremer , Alexis Ducousso
Congress of the European Society for Evolutionary Biology (ESEB), Lukáš Kratochvíl, Aug 2019, Prague (Czech Republic), Czech Republic
Communication dans un congrès hal-04144342v1
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An integrated information system dedicated to oak genomics and genetics

Joëlle Amselem , Nicolas Francillonne , Célia Michotey , Thomas Letellier , Jean-Marc Aury
PAG XXVI Plant and Animal Genome Conference, Jan 2018, San Diego, United States. pp.27 slides
Communication dans un congrès hal-01839185v1

Identification of recent secondary contacts between four morphologically distinct oak species

Thibault Leroy , Camille Roux , Catherine Bodenes-Brezard Bodénès , Jean-Marc Aury , Antoine Kremer
Genomics and Forest Tree Genetics Conference, Institut National de Recherche Agronomique (INRA). UMR Biodiversité, Gènes et Communautés (1202)., May 2016, Arcachon, France. 134 p
Communication dans un congrès hal-02743580v1

Waterlogged oak wood from across Europe provides new source for tree ancient DNA

Stefanie Wagner , Frédéric F. Lagane , Emilie E. Chancerel , Yves Billaud , Willy Tegel
Genomics and Forest Tree Genetics Conference, Institut National de Recherche Agronomique (INRA). UMR Biodiversité, Gènes et Communautés (1202)., May 2016, Arcachon, France. 134 p
Communication dans un congrès hal-02741339v1

Oak genome sequencing and evolution

Jerome J. Salse , Jean Marc Aury , Florent Murat , Sébastien Faye , Karine Labadie
Genomics and Forest Tree Genetics Conference, Institut National de Recherche Agronomique (INRA). UMR Biodiversité, Gènes et Communautés (1202)., May 2016, Arcachon, France. 134 p
Communication dans un congrès hal-02741698v1

Annotation of the oak genome sequence and associated bioinformatic resources

Joelle J. Amselem , Jean Marc Aury , Nicolas Francillonne , Tina Alaeitabar , Corinne da Silva
IUFRO Genomics and Forest Tree Genetics, Institut National de Recherche Agronomique (INRA). UMR Biodiversité, Gènes et Communautés (1202)., May 2016, Arcachon, France. 134 p
Communication dans un congrès hal-02741128v1
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Control of chilling requirement and flowering time in trees; linking genetics and genomics to understand these complex phenological traits in deciduous fruit and forest trees

Albert G. Abbott , Stéphanie Mariette , Lucia Andreini , Tatyana Zhebentyayeva , Zongrang Liu
Plant and Animal Genome XXII Conference, Jan 2014, San Diego, United States
Communication dans un congrès hal-02798021v1

Sequencing and analysis of the oak transcriptome using RNA-seq technologies

Isabelle Lesur Kupin Lesur , Grégoire G. Le Provost , Céline C. Lalanne , François Ehrenmann , Céline Noirot
IUFRO working group “Genetics of Quercus and Nothofagus”, Institut National de Recherche Agronomique (INRA). UMR Biodiversité, Gènes et Communautés (1202)., Oct 2012, Bordeaux, France. 1 p
Communication dans un congrès hal-02806071v1

Identification of genes involved in bud dormancy in sessile oak (Quercus petraea Matt. Liebl) using RNA-seq

Grégoire G. Le Provost , Ueno Saneyoshi , Christophe C. Klopp , Jean-Charles Leplé , Jérémy Derory
IUFRO working group “Genetics of Quercus and Nothofagus”, Institut National de Recherche Agronomique (INRA). UMR Biodiversité, Gènes et Communautés (1202)., Oct 2012, Bordeaux, France. 1 p
Communication dans un congrès hal-02809075v1

Sequencing allelic BACs for exploring the level of genome heterozygosity in oak

Patricia P. Faivre-Rampant , Nathalie N. Pavy , Isabelle I. Le Clainche , Aurelie A. Canaguier , Cecile C. Guichard
IUFRO working group "Genetics of Quercus and Nothofagus", Institut National de Recherche Agronomique (INRA). UMR Biodiversité, Gènes et Communautés (1202)., Oct 2012, Bordeaux, France. 1 p
Communication dans un congrès hal-00964429v1

Genomic scan of Interspecific divergence in european white oaks

Laure Villate , Catherine Bodenes-Brezard Bodénès , Emilie E. Chancerel , Camille Lepoittevin , Christophe Plomion
IUFRO working group “Genetics of Quercus and Nothofagus”, Institut National de Recherche Agronomique (INRA). UMR Biodiversité, Gènes et Communautés (1202)., Oct 2012, Bordeaux, France. 1 p
Communication dans un congrès hal-02804203v1

Development of genomic resources to study the structure, function and evolution of the oak genome

Christophe Plomion , Joelle J. Amselem , Jean-Marc Aury , Catherine Bodenes , Emilie Chancerel
IUFRO working group "Genetics of Quercus and Nothofagus", Institut National de Recherche Agronomique (INRA). UMR Biodiversité, Gènes et Communautés (1202)., Oct 2012, Bordeaux, France. 1 p
Communication dans un congrès hal-01019850v1

Development of high density linkage maps in European oak for multi-objective genetic applications

Catherine Bodenes-Brezard Bodénès , Emilie E. Chancerel , Camille Lepoittevin , François Ehrenmann , Isabelle Lesur Kupin Lesur
IUFRO working group “Genetics of Quercus and Nothofagus”, Institut National de Recherche Agronomique (INRA). UMR Biodiversité, Gènes et Communautés (1202)., Oct 2012, Bordeaux, France. 1 p
Communication dans un congrès hal-02805716v1

Selective pressures between oaks and their obligate fungal parasite causing powdery mildew

Marie Laure M. L. Desprez Loustau , Thibaut Decourcelle , Sylvain S. Delzon , Christian Cyril Dutech , Nicolas Feau
Conference on Forest Ecosystem Genomics and Adaptation, Jun 2010, Madrid, Spain
Communication dans un congrès hal-02755832v1

A web portal for oak genetic and genomic data

Jean-Paul Soularue , Frédéric Raspail , Audrey Jacques-Gustave , Christophe Plomion , Thierry Labbé
Conference on Forest Ecosystem Genomics and Adaptation, Jun 2010, Madrid, Spain
Communication dans un congrès hal-02753691v1

Transcriptome analysis of bud dormancy in sessile oak (Quercus petraea (Matt.) Libel.) by 454 pyrosequencing

Saneyoshi Ueno , Grégoire G. Le Provost , Céline Noirot , Christophe C. Klopp , Antoine Kremer
Conference on Forest Ecosystem Genomics and Adaptation, Jun 2010, Madrid, Spain
Communication dans un congrès hal-02753292v1

In silico screening of conserved orthologous sequences(COS) from Fagaceae ESTs resources

Yao-Cheng Lin , Saneyoshi Ueno , Jean-Marc Frigerio , Cyril Cabane , Catherine Bodenes-Brezard Bodénès
Conference on Forest Ecosystem Genomics and Adaptation, Jun 2010, Madrid, Spain
Communication dans un congrès hal-02755595v1

Population genomics of phenological clines in sessile oak (Quercus petraea (matt.) Leibl.)

Florian Alberto , Jérémy Derory , Barbara Vornam , Pablo Goicoechea , Stephen Cavers
Conference on Forest Ecosystem Genomics and Adaptation, Jun 2010, Madrid, Spain
Communication dans un congrès hal-02755412v1

Comparative genetic mapping between oak (Quercus) and chestnut (Castanea) species

Catherine Bodenes-Brezard Bodénès , Jérôme J. Durand , Emilie E. Chancerel , Fiorella Villani , Claudia Mattioni
Conference on Forest Ecosystem Genomics and Adaptation, Jun 2010, Madrid, Spain
Communication dans un congrès hal-02754603v1

Development of a bac library and bac end sequencing for pedunculate oak (Quercus robur L.) : new tools for oak genome studies

Patricia P. Faivre-Rampant , Frederique Bitton , Clément Boussardon , Catherine Bodenes-Brezard , Emilie E. Chancerel
Conference on Forest Ecosystem Genomics and Adaptation, Jun 2010, Madrid, Spain
Communication dans un congrès hal-02753048v1

Bioinformatic analysis of Sanger and 454 ESTs in oak

Saneyoshi S. Ueno , Grégoire G. Le Provost , Valérie V. Léger , Christophe C. Klopp , Celine C. Noirot
Conference on Forest Ecosystem Genomics and Adaptation, Jun 2010, Madrid, Spain. pp.73
Communication dans un congrès hal-00964385v1

Genome scanning of regions showing divergent evolution between white oaks (Quercus petraea (matt.) Liebl. and Q.robur l.) : new insights from the oak allelic resequencing project

Pauline Garnier‐géré , Tiange Lang , Pierre P. Abadie , Thibaut Decourcelle , Valérie V. Léger
Conference on Forest Ecosystem Genomics and Adaptation, Jun 2010, Madrid, Spain
Communication dans un congrès hal-02753045v1

Candidate gene mapping in pedunculate oak (Quercus robur L.)

Emilie E. Chancerel , Christophe C. Boury , Florian Alberto , Jérôme J. Durand , Antoine Kremer
Conference on Forest Ecosystem Genomics and Adaptation, Jun 2010, Madrid, Spain
Communication dans un congrès hal-02752968v1

Development of genomic resources in oak to study the structure, variability, evolution and functioning of its genome

Christophe Plomion , Franck Salin , Jean-Marc Frigerio , Catherine Bodenes , Patricia Faivre Rampant
Tree Biotechnology 2007, Jun 2007, Ponta Delgada, Portugal. 33p
Communication dans un congrès hal-00337729v1

Molecular determinism of flooding responses, an adaptative trait discriminating pedunculate and sessile oak species

Cécile Sulmon , Grégoire Le Provost , Christophe Plomion , Catherine Bodenes , Antoine Kremer
Conférence Jacques Monod ‘Environmental Genomics', Jun 2007, Roscoff, France
Communication dans un congrès hal-00337982v1

Molecular determinism of flooding responses, an adaptative trait discriminating pedunculate and sessile oak species

Cécile Sulmon , Grégoire Le Provost , Christophe Plomion , Catherine Bodenes , Antoine Kremer
Tree Biotechnology 2007, Jun 2007, Ponta Delgada, Portugal. p. 27
Communication dans un congrès hal-00337731v1

Development of genomic resources in oak to study the structure, variability, evolution and functioning of its genome

Christophe Plomion , Franck Salin , Jean-Marc Frigerio , Catherine Bodenes , Patricia Faivre Rampant
International Plant & Animal genomes XV Conferences, Jan 2007, San Diego, United States
Communication dans un congrès hal-00337980v1
Image document

Effets de la sélection sur la diversité et la différenciation génétique moléculaire : résultats de simulations et application au pin maritime pour les gènes de la lignification

Pauline Garnier‐géré , Frédéric Austerlitz , Frank Bedon , Antoine Kremer , Christophe Plomion
5. Colloque national du BRG, Nov 2004, Lyon, France
Communication dans un congrès hal-02762648v1

Genetic determinism of leaf carbon isotope composition for a pedunculate Oak family

Oliver Brendel , Caroline Scotti-Saintagne , Didier Le Thiec , Teresa Barreneche , Christophe Plomion
Dynamics and conservation of genetic diversity in forest ecosystems. International Conference DYGEN, Dec 2002, Strasbourg, France. n.p
Communication dans un congrès hal-02830897v1

Genetic dissection of phenotypic traits in maritime pine using RAPD and protein markers

Christophe Plomion , Nasser Bahrman , Charles Eric Durel , D.M. O'Malley , Antoine Kremer
Joint Meeting of the IUFRO International Union of Forestry Research Organizations, Sep 1995, Gand, Belgium
Communication dans un congrès hal-02765475v1

Cartographie et architecture génétique de caractères quantitatifs chez le pin maritime

Christophe Plomion , Nasser Bahrman , P. Costa , D.E. Durel , Antoine Kremer
Groupe de travail "Marqueurs moléculaires chez les Végétaux", Mar 1995, Méribel, France
Communication dans un congrès hal-02774362v1

Genetic mapping and analysis of QTL' in eucalyptus

D. Verhaegen , Christophe Plomion , Antoine Kremer
Joint meeting of IUFRO molecular genetics. Working group and somatic cell working group, Sep 1995, Gent, Belgium
Communication dans un congrès hal-02776141v1

Identification of proteins involved in drought stress of maritime pine seedlings

P. Costa , Nasser Bahrman , Denis Loustau , A. Queyrens , Christophe Plomion
Inter-Drought 95, Aug 1995, Montpellier, France
Communication dans un congrès hal-02775635v1

Detection of WUE positional candidate genes by combining QTL maps and BAC sequencing with the annotated oak genome sequence

Nicolas Francillonne , Catherine Bodenes-Brezard Bodénès , François Ehrenmann , Célia Michotey , Antoine Kremer
Genomics and Forest Tree Genetics Conference, May 2016, Arcachon, France. , 134 p., 2016, Book of abstracts
Poster de conférence hal-02741266v1

High density genetic map in oak reveals segregation distortion in oak and allows comparative mapping between oak and chestnut

Catherine Bodenes-Brezard Bodénès , Emilie E. Chancerel , François Ehrenmann , Meg Staton , Thomas Lane
Genomics and Forest Tree Genetics Conference, May 2016, Arcachon, France. , 134 p., 2016, Book of abstracts
Poster de conférence hal-02741322v1

From whole-genome scans for divergence to the discovery of speciation genes in oaks

Thibault Leroy , Jean Marc Aury , Catherine Bodenes-Brezard Bodénès , Laure Villate , Grégoire G. Le Provost
15. Congress of the European Society for Evolutionary Biology (ESEB), Aug 2015, Lausanne, Switzerland. , 1 p., 2015
Poster de conférence hal-02797182v1

De novo assembly of Fagus sylvatica transcriptome based on Sanger and 454 ESTs: application in transcriptome-scale analysis of bud phenology and markers development

Isabelle Lesur Kupin Lesur , Grégoire G. Le Provost , Céline C. Lalanne , François Ehrenman , Céline Noirot
IUFRO working group “Genetics of Quercus and Nothofagus”, Oct 2012, Bordeaux, France. 1 p., 2012
Poster de conférence hal-02802761v1

BAC libraries for structural genomic development in oak

Patricia P. Faivre-Rampant , Isabelle Lesur Kupin Lesur , Isabelle I. Le Clainche , Aurelie A. Canaguier , Clément Boussardon
IUFRO working group “Genetics of Quercus and Nothofagus”, Oct 2012, Bordeaux, France. 1 p., 2012
Poster de conférence hal-02808373v1
Image document

Patrons de diversité nucléotidique de gènes candidats à la tolérance au stress hydrique chez 5 espèces d'arbres forestiers

Pauline Garnier‐géré , Isabella Paolucci , Thibaut Decourcelle , Véronique V. Jorge , Emmanuelle Eveno
7. colloque national du BRG "Ressources génétiques" : les ressources génétiques à l'heure des génomes, Oct 2008, Strasbourg, France. 1 p., 2008
Poster de conférence hal-02821517v1

Fagaceae trees

Antoine Kremer , Manuela Casasoli , Teresa Barreneche , Catherine Bodenes-Brezard , Paul Sisco
Genome mapping and molecular breeding in plants. Forest trees, Springer-Verlag, 2007, Genome Mapping and Molecular Breeding in Plants, 978-3-5403-4540-4. ⟨10.1007/978-3-540-34541-1_5⟩
Chapitre d'ouvrage hal-01189181v1