Christian VESTERGAARD

Publications

Documents

Publications

	Simulation-based inference for non-parametric statistical comparison of biomolecule dynamics Hippolyte Verdier , François Laurent , Alhassan Cassé , Christian L. Vestergaard , Christian Specht PLoS Computational Biology, 2023, 19 (2), pp.e1010088. ⟨10.1371/journal.pcbi.1010088⟩ Article dans une revue hal-03876446v2
	Randomized reference models for temporal networks Laetitia Gauvin , Mathieu Génois , Marton Karsai , Mikko Kivelä , Taro Takaguchi SIAM Review, 2022, 64 (4), ⟨10.1137/19M1242252⟩ Article dans une revue hal-01817633v4
	Variational inference of fractional Brownian motion with linear computational complexity Hippolyte Verdier , François Laurent , Alhassan Cassé , Christian L Vestergaard , Jean-Baptiste Masson Physical Review E , 2022, 106, pp.055311. ⟨10.1103/PhysRevE.106.055311⟩ Article dans une revue hal-03612918v3
	Hematopoietic stem cell transplantation chemotherapy causes microglia senescence and peripheral macrophage engraftment in the brain Kurt A Sailor , George Agoranos , Sergio López-Manzaneda , Satoru Tada , Beatrix Gillet-Legrand Nature Medicine, 2022, ⟨10.1038/s41591-022-01691-9⟩ Article dans une revue pasteur-03588683v1
	TRamWAy: mapping physical properties of individual biomolecule random motion in large-scale single-particle tracking experiments François Laurent , Hippolyte Verdier , Maxime Duval , Alexander Serov , Christian L Vestergaard Bioinformatics, 2022, 38 (11), pp.3149-3150. ⟨10.1093/bioinformatics/btac291⟩ Article dans une revue pasteur-03695448v1
	Learning physical properties of anomalous random walks using graph neural networks Hippolyte Verdier , Maxime Duval , François Laurent , Alhassan Cassé , Christian L. Vestergaard Journal of Physics A: Mathematical and Theoretical, 2021, 54, pp.234001 Article dans une revue pasteur-03150190v2
	Mapping spatio-temporal dynamics of single biomolecules in living cells François Laurent , Charlotte Floderer , Cyril Favard , Delphine Muriaux , Jean-Baptiste Masson Physical Biology, 2020, 17 (1), pp.015003. ⟨10.1088/1478-3975/ab5167⟩ Article dans une revue pasteur-02408362v1
	Statistical Tests for Force Inference in Heterogeneous Environments Alexander S Serov , François Laurent , Charlotte Floderer , Karen Perronet , Cyril Favard Scientific Reports, 2020, 10 (1), pp.3783. ⟨10.1038/s41598-020-60220-1⟩ Article dans une revue pasteur-02865729v1
	Single-particle trajectories reveal two-state diffusion-kinetics of hOGG1 proteins on DNA Christian L. Vestergaard , Paul C Blainey , Henrik Flyvbjerg Nucleic Acids Research, 2018, pp.gky004. ⟨10.1093/nar/gky004⟩ Article dans une revue hal-01690314v1
	Évaluer le risque épidémique à partir de données lacunaires Mathieu Génois , Christian L. Vestergaard , Alain Barrat Médecine/Sciences, 2016, 32 (5), pp.506. ⟨10.1051/medsci/20163205019⟩ Article dans une revue hal-01435397v1
	Recalibrating disease parameters for increasing realism in modeling epidemics in closed settings Livio Bioglio , Mathieu Génois , Christian L. Vestergaard , Chiara Poletto , Alain Barrat BMC Infectious Diseases, 2016, 16 (1), pp.676. ⟨10.1186/s12879-016-2003-3⟩ Article dans une revue inserm-01396695v1
	Optimizing experimental parameters for tracking of diffusing particles Christian L. Vestergaard Physical Review E , 2016, 94 (2), pp.022401. ⟨10.1103/PhysRevE.94.022401⟩ Article dans une revue hal-01144950v2
	Impact of spatially constrained sampling of temporal contact networks on the evaluation of the epidemic risk Christian L. Vestergaard , Eugenio Valdano , Mathieu Génois , Chiara Poletto , Vittoria Colizza European Journal of Applied Mathematics, 2016, 27 (6), pp.941-957. ⟨10.1017/S0956792516000309⟩ Article dans une revue hal-01342800v1
	Transition state theory demonstrated at the micron scale with out-of-equilibrium transport in a confined environment Christian L. Vestergaard , Morten Bo Mikkelsen , Walter Reisner , Anders Kristensen , Henrik Flyvbjerg Nature Communications, 2016, 7, pp.10227. ⟨10.1038/ncomms10227⟩ Article dans une revue hal-01257781v1
	Compensating for population sampling in simulations of epidemic spread on temporal contact networks Mathieu Génois , Christian L. Vestergaard , Ciro Cattuto , Alain Barrat Nature Communications, 2015, 6, pp.8860 Article dans une revue hal-01131855v1
	Data on face-to-face contacts in an office building suggests a low-cost vaccination strategy based on community linkers Mathieu Génois , Christian L. Vestergaard , Julie Fournet , André Panisson , Isabelle Bonmarin Network Science, 2015, 3 (3), pp.326-347. ⟨10.1017/nws.2015.10⟩ Article dans une revue hal-01113431v1
	Temporal Gillespie algorithm: Fast simulation of contagion processes on time-varying networks Christian L. Vestergaard , Mathieu Génois PLoS Computational Biology, 2015, 11 (10), pp.e1004579. ⟨10.1371/journal.pcbi.1004579⟩ Article dans une revue hal-01140134v2
	Harmonic force spectroscopy measures load-dependent kinetics of individual human b-cardiac myosin molecules Jongmin Sung , Suman Nag , Kim I. Mortensen , Christian L. Vestergaard , Shirley Sutton Nature Communications, 2015, 6, pp.7931. ⟨10.1038/ncomms8931⟩ Article dans une revue hal-01190174v1
	Estimation of motility parameters from trajectory data Christian L. Vestergaard , Jonas N. Pedersen , Kim I. Mortensen , Henrik Flyvbjerg The European Physical Journal. Special Topics, 2015, 224 (7), pp.1151-1168. ⟨10.1140/epjst/e2015-02452-5⟩ Article dans une revue hal-01212510v1
	How memory generates heterogeneous dynamics in temporal networks Christian L. Vestergaard , Mathieu Génois , Alain Barrat Physical Review E : Statistical, Nonlinear, and Soft Matter Physics, 2014, 90 (4), pp.042805. ⟨10.1103/PhysRevE.90.042805⟩ Article dans une revue hal-01061650v1

	Gillespie Algorithms for Stochastic Multiagent Dynamics in Populations and Networks Naoki Masuda , Christian L. Vestergaard Cambridge University Press, 2022, Cambridge Elements: The Structure and Dynamics of Complex Networks, Guido Caldarelli, 978-1-009-23915-8 (ebook). ⟨10.1017/9781009239158⟩ Ouvrages pasteur-03992050v1

	Approximate information maximization for bandit games Alex Barbier-Chebbah , Christian L. Vestergaard , Jean-Baptiste Masson , Etienne Boursier 2023 Pré-publication, Document de travail hal-04246907v3
	Approximate information for efficient exploration-exploitation strategies Alex Barbier--Chebbah , Christian L. Vestergaard , Jean-Baptiste Masson 2023 Pré-publication, Document de travail hal-04147006v1
	A maximum mean discrepancy approach reveals subtle changes in α -synuclein dynamics Hippolyte Verdier , François Laurent , Alhassan Cassé , Christian L Vestergaard , Christian G Specht 2022 Pré-publication, Document de travail pasteur-04008283v1

Christian VESTERGAARD

Publications

Simulation-based inference for non-parametric statistical comparison of biomolecule dynamics

Randomized reference models for temporal networks

Variational inference of fractional Brownian motion with linear computational complexity

Hematopoietic stem cell transplantation chemotherapy causes microglia senescence and peripheral macrophage engraftment in the brain

TRamWAy: mapping physical properties of individual biomolecule random motion in large-scale single-particle tracking experiments

Learning physical properties of anomalous random walks using graph neural networks

Mapping spatio-temporal dynamics of single biomolecules in living cells

Statistical Tests for Force Inference in Heterogeneous Environments

Single-particle trajectories reveal two-state diffusion-kinetics of hOGG1 proteins on DNA

Évaluer le risque épidémique à partir de données lacunaires

Recalibrating disease parameters for increasing realism in modeling epidemics in closed settings

Optimizing experimental parameters for tracking of diffusing particles

Impact of spatially constrained sampling of temporal contact networks on the evaluation of the epidemic risk

Transition state theory demonstrated at the micron scale with out-of-equilibrium transport in a confined environment

Compensating for population sampling in simulations of epidemic spread on temporal contact networks

Data on face-to-face contacts in an office building suggests a low-cost vaccination strategy based on community linkers

Temporal Gillespie algorithm: Fast simulation of contagion processes on time-varying networks

Harmonic force spectroscopy measures load-dependent kinetics of individual human b-cardiac myosin molecules

Estimation of motility parameters from trajectory data

How memory generates heterogeneous dynamics in temporal networks

Gillespie Algorithms for Stochastic Multiagent Dynamics in Populations and Networks

Approximate information maximization for bandit games

Approximate information for efficient exploration-exploitation strategies

A maximum mean discrepancy approach reveals subtle changes in α -synuclein dynamics