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ATTRACT and PTOOLS: Open source programs for protein-protein docking

S. Schneider , A. Saladin , S. Fiorucci , C. Prevost , M.S Zacharias
Methods in Molecular Biology, 2012, 819, pp.221--232. ⟨10.1007/978-1-61779-465-0_15⟩
Article dans une revue hal-01498107v1
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PTools: an opensource molecular docking library.

Adrien Saladin , Sébastien Fiorucci , Pierre Poulain , Chantal Prévost , Martin Zacharias
BMC Structural Biology, 2009, 9, pp.27. ⟨10.1186/1472-6807-9-27⟩
Article dans une revue inserm-00474185v1

Geometry of the DNA strands within the RecA nucleofilament: role in homologous recombination

Chantal Prévost , Masayuki Takahashi
Quarterly Reviews of Biophysics, 2003, 36 (4), pp.429-453. ⟨10.1017/s0033583504003956⟩
Article dans une revue istex hal-04245490v1

A model for parallel triple helix formation by RecA: single-single association with a homologous duplex via the minor groove.

G. Bertucat , R. Lavery , C. Prevost
Journal of Biomolecular Structure and Dynamics, 1998, 16, pp.535-546
Article dans une revue hal-00313417v1

Searching for Homology by Filaments of RecA-Like Proteins

Chantal Prévost
Recombination and Meiosis, 10 (9-10), Springer Berlin Heidelberg, pp.65-89, 2009, ⟨10.1007/7050_2007_038⟩
Chapitre d'ouvrage hal-04245420v1

Docking Peptides on Proteins: How to Open a Lock, in the Dark, with a Flexible Key

Sophie Sacquin-Mora , Chantal Prévost
Article dans une revue hal-01451174v1
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The positioning of Chi sites allows the RecBCD pathway to suppress some genomic rearrangements

Chastity Li , Claudia Danilowicz , Tommy Tashjian , Veronica Godoy , Chantal Prevost , et al.
Nucleic Acids Research, 2019, 47 (4), pp.1836-1846. ⟨10.1093/nar/gky1252⟩
Article dans une revue hal-02342473v1

Mobility and core-protein binding patterns of disordered C-terminal tails in β-tubulin isotypes.

Yoann Laurin , Joël Eyer , Charles H. Robert , C Prévost , S. Sacquin-Mora
Biochemistry (mosc.), 2017, ⟨10.1021/acs.biochem.6b00988⟩
Article dans une revue hal-01497972v1

A molecular model for RecA-promoted strand exchange via parallel triple-stranded helices.

G. Bertucat , R. Lavery , C. Prevost
Biophysical Journal, 1999, 77, pp.1562-1576
Article dans une revue hal-00313413v1

Distortions of the DNA double helix induced by 1,3-trans-diamminedichloroplatinum(II)-intrastrand cross-link: an internal coordinate molecular modeling study.

C. Prevost , M. Boudvillain , P. Beudaert , M. Leng , R. Lavery , et al.
Journal of Biomolecular Structure and Dynamics, 1997, 14, pp.703-714
Article dans une revue hal-00313421v1

Liver fibrosis staging with contrast-enhanced ultrasonography: prospective multicenter study compared with METAVIR scoring

F Staub , C Tournoux-Facon , J Roumy , C Chaigneau , M Morichaut-Beauchant , et al.
European Radiology, 2009, 19 (8), pp.1991-1997. ⟨10.1007/s00330-009-1313-x⟩
Article dans une revue istex hal-03269732v1
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On the Characterization and Selection of Diverse Conformational Ensembles, with Applications to Flexible Docking

Sebastien Loriot , Sushant Sachdeva , Karine Bastard , Chantal Prevost , Frédéric Cazals
[Research Report] RR-6503, INRIA. 2009
Rapport inria-00252046v3
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Insights on protein-DNA recognition by coarse grain modelling.

Pierre Poulain , Adrien Saladin , Brigitte Hartmann , Chantal Prévost
Journal of Computational Chemistry, 2008, 29 (15), pp.2582-92. ⟨10.1002/jcc.21014⟩
Article dans une revue inserm-00320808v1

Investigating the Structural Variability and Binding Modes of the Glioma Targeting NFL-TBS.40-63 Peptide on Tubulin

Yoann Laurin , Philippe Savarin , Charles H Robert , Masayuki Takahashi , Joël Eyer , et al.
Article dans une revue hal-01451181v1

Integrating multi-scale data on homologous recombination into a new recognition mechanism based on simulations of the RecA-ssDNA/dsDNA structure

Darren Yang , Benjamin Boyer , C Prévost , Claudia Danilowicz , Mara Prentiss
Nucleic Acids Research, 2015, 43, pp.10251--63. ⟨10.1093/nar/gkv883⟩
Article dans une revue hal-01498002v1
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Residues in the fingers domain of the translesion DNA polymerase DinB enable its unique participation in error-prone double-strand break repair

Tommy Tashjian , Claudia Danilowicz , Anne-Elizabeth Molza , Brian Nguyen , Chantal Prevost , et al.
Journal of Biological Chemistry, 2019, 294 (19), pp.7588-7600. ⟨10.1074/jbc.RA118.006233⟩
Article dans une revue hal-02342470v1
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RecA requires two molecules of Mg2+ ions for its optimal strand exchange activity in vitro

Raeyeong Kim , Shuji Kanamaru , Tsutomu Mikawa , Chantal Prevost , Kentaro Ishii , et al.
Nucleic Acids Research, 2018, 46 (5), pp.2548-2559. ⟨10.1093/nar/gky048⟩
Article dans une revue hal-02342476v1

It takes tau to tango: investigating the fuzzy interaction between the tau-R2 repeat and tubulin C-terminal tails

Jules Marien , Chantal Prevost , Sophie Sacquin-Mora
XXIIIème congrès du GGMM, May 2023, Toulouse, France
Poster de conférence hal-04112694v1
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Moving pictures: Reassessing docking experiments with a dynamic view of protein interfaces

Chantal Prevost , Sophie Sacquin-Mora
Proteins - Structure, Function and Bioinformatics, 2021, 89 (10), pp.1315-1323. ⟨10.1002/prot.26152⟩
Article dans une revue hal-03065754v1

Docking macromolecules with flexible segments.

K. Bastard , A. Thureau , R. Lavery , C. Prevost
J Comput Chem, 2003, 24, pp.1910-1920
Article dans une revue hal-00313401v1

Persistence analysis of the static and dynamical helix deformations of DNA oligonucleotides: application to the crystal structure and molecular dynamics simulation of d(CGCGAATTCGCG)2.

C. Prevost , S. Louise-May , G. Ravishanker , R. Lavery , Dl Beveridge
Biopolymers, 1993, 33, pp.335-350
Article dans une revue hal-00313435v1
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Collective-variable Monte Carlo simulation of DNA

H. Gabb , Chantal Prevost , G. Bertucat , C. Robert , R. Lavery
Journal of Computational Chemistry, 1997, 18 (16), pp.2001-2011. ⟨10.1002/(SICI)1096-987X(199712)18:16<2001::AID-JCC5>3.0.CO;2-P⟩
Article dans une revue hal-04245548v1
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Slow extension of the invading DNA strand in a D-loop formed by RecA-mediated homologous recombination may enhance recognition of DNA homology

Daniel Lu , Claudia Danilowicz , Tommy Tashjian , Chantal Prevost , Veronica Godoy , et al.
Journal of Biological Chemistry, 2019, 294 (21), pp.8606-8616. ⟨10.1074/jbc.RA119.007554⟩
Article dans une revue hal-02342458v1
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Modeling the Homologous Recombination Process: Methods, Successes and Challenges

Afra Sabei , Mara Prentiss , Chantal Prévost
International Journal of Molecular Sciences, 2023, 24 (19), pp.14896. ⟨10.3390/ijms241914896⟩
Article dans une revue hal-04245253v1
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Highly mismatch-tolerant homology testing by RecA could explain how homology length affects recombination

Mara Prentiss , Dianzhuo Wang , Jonathan Fu , Chantal Prévost , Veronica Godoy-Carter , et al.
PLoS ONE, 2023, 18 (7), pp.e0288611. ⟨10.1371/journal.pone.0288611⟩
Article dans une revue hal-04245252v1
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An Integrative Approach to the Study of Filamentous Oligomeric Assemblies, with Application to RecA

Benjamin Boyer , Johann Ezelin , Pierre Poulain , Adrien Saladin , Martin Zacharias , et al.
PLoS ONE, 2015, 10 (3), pp.e0116414. ⟨10.1371/journal.pone.0116414⟩
Article dans une revue hal-01230983v1
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Optimizing the Design of Oligonucleotides for Homology Directed Gene Targeting

Judith Miné-Hattab , Geneviève Fleury , Chantal Prévost , Marie Dutreix , Jean-Louis Viovy
PLoS ONE, 2011, 6 (4), pp.e14795. ⟨10.1371/journal.pone.0014795⟩
Article dans une revue hal-04245366v1
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Accounting for loop flexibility during protein–protein docking

Karine Bastard , Chantal Prévost , Martin Zacharias
Proteins - Structure, Function and Bioinformatics, 2006, 62 (4), pp.956-969. ⟨10.1002/prot.20770⟩
Article dans une revue hal-04245445v1

Structure/function relationships in RecA protein-mediated homology recognition and strand exchange

Mara Prentiss , C Prévost , Claudia Danilowicz
Crit. Rev. Biochem. Mol. Biol., 2015, 50, pp.453--76. ⟨10.3109/10409238.2015.1092943⟩
Article dans une revue hal-01498019v1

Collective-variable Monte Carlo simulation of DNA

Henry A Gabb , C. Prevost , G. Bertucat , Ch Robert , Richard Lavery
Journal of Computational Chemistry, 1997, 18, pp.2001-2011
Article dans une revue hal-00314819v1