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255

Mes publications de chimiste RMN au service du métabolisme, des bactéries aux plantes en passant par l'animal


Journal articles75 documents

  • Maria Urrutia, Melisande Blein-Nicolas, Sylvain Prigent, Stéphane Bernillon, Catherine Deborde, et al.. Maize metabolome and proteome responses to controlled cold stress partly mimic early‐sowing effects in the field and differ from those of Arabidopsis. Plant, Cell and Environment, Wiley, 2021, 44 (5), pp.1504-1521. ⟨10.1111/pce.13993⟩. ⟨hal-03107184⟩
  • María Paz Covarrubias, Victoria Lillo-Carmona, Lorena Melet, Gianfranco Benedetto, Diego Andrade, et al.. Metabolite Fruit Profile Is Altered in Response to Source–Sink Imbalance and Can Be Used as an Early Predictor of Fruit Quality in Nectarine. Frontiers in Plant Science, Frontiers, 2021, 11, pp.604133. ⟨10.3389/fpls.2020.604133⟩. ⟨hal-03107100⟩
  • Guilhem Pagès, Catherine Deborde, Martine Lemaire-Chamley, Annick Moing, J.-M. Bonny. MRSI vs CEST MRI to understand tomato metabolism in ripening fruit: is there a better contrast?. Analytical and Bioanalytical Chemistry, Springer Verlag, 2021, 413, pp.1251-1257. ⟨10.1007/s00216-020-03101-w⟩. ⟨hal-03101885⟩
  • Catherine Deborde, Blandine Hounoum, Annick Moing, Mickaël Maucourt, Daniel Jacob, et al.. Putative imbalanced amino acid metabolism in rainbow trout long term fed a plant-based diet as revealed by 1 H-NMR metabolomics. Journal of Nutritional Science, Nutrition Society, 2021, 10, pp.e13. ⟨10.1017/jns.2021.3⟩. ⟨hal-03163223⟩
  • Jean-Yves Cornu, Sylvie Bussiere, Cécile Coriou, Thierry Robert, Mickaël Maucourt, et al.. Changes in plant growth, Cd partitioning and xylem sap composition in two sunflower cultivars exposed to low Cd concentrations in hydroponics. Ecotoxicology and Environmental Safety, Elsevier, 2020, 205, ⟨10.1016/j.ecoenv.2020.111145⟩. ⟨hal-02926808⟩
  • Annick Moing, J. William Allwood, Asaph Aharoni, John Baker, Michael Beale, et al.. Comparative Metabolomics and Molecular Phylogenetics of Melon (Cucumis melo, Cucurbitaceae) Biodiversity. Metabolites, MDPI, 2020, 10 (3), pp.121. ⟨10.3390/metabo10030121⟩. ⟨hal-02533195⟩
  • Simon Roques, Catherine Deborde, Laurence Guimas, Yann Marchand, Nadege Richard, et al.. Integrative Metabolomics for Assessing the Effect of Insect (Hermetia illucens) Protein Extract on Rainbow Trout Metabolism. Metabolites, MDPI, 2020, 10 (3), pp.83. ⟨10.3390/metabo10030083⟩. ⟨hal-02570723⟩
  • Titouan Bonnot, Pierre Martre, Victor Hatte, Mireille Dardevet, Philippe Leroy, et al.. Omics data reveal putative regulators of einkorn grain protein composition under sulphur deficiency. Plant Physiology, American Society of Plant Biologists, 2020, 183 (2), pp.501-516. ⟨10.1104/pp.19.00842⟩. ⟨hal-02553742⟩
  • Simon Roques, Catherine Deborde, Nadege Richard, Sandrine Skiba-Cassy, Annick Moing, et al.. Metabolomics and fish nutrition: a review in the context of sustainable feed development. Reviews in Aquaculture, Wiley, 2020, 112 (1), pp.261-282. ⟨10.1111/raq.12316⟩. ⟨hal-02141403⟩
  • Simon Roques, Catherine Deborde, Nadege Richard, Yann Marchand, Laurence Larroquet, et al.. Proton-NMR Metabolomics of Rainbow Trout Fed a Plant-Based Diet Supplemented with Graded Levels of a Protein-Rich Yeast Fraction Reveal Several Metabolic Processes Involved in Growth. Journal of Nutrition, American Society for Nutrition, 2020, 150 (9), pp.2268-2277. ⟨10.1093/jn/nxaa206⟩. ⟨hal-02927022⟩
  • Arnab Dey, Benoît Charrier, Estelle Martineau, Catherine Deborde, Elodie Gandriau, et al.. Hyperpolarized NMR Metabolomics at Natural 13 C Abundance. Analytical Chemistry, American Chemical Society, 2020, 92 (22), pp.14867-14871. ⟨10.1021/acs.analchem.0c03510⟩. ⟨hal-03035414⟩
  • Constance Musseau, Joana Jorly, Stéphanie Gadin, Iben Sørensen, Catherine Deborde, et al.. The Tomato Guanylate-Binding Protein SlGBP1 Enables Fruit Tissue Differentiation by Maintaining Endopolyploid Cells in a Non-proliferative State. The Plant cell, American Society of Plant Biologists (ASPB), 2020, 32 (10), pp.3188-3205. ⟨10.1105/tpc.20.00245⟩. ⟨hal-02914290⟩
  • Léa Roch, Sylvain Prigent, Holger Klose, Coffi-Belmys Cakpo, Bertrand Beauvoit, et al.. Biomass composition explains fruit relative growth rate and discriminates climacteric from non-climacteric species. Journal of Experimental Botany, Oxford University Press (OUP), 2020, ⟨10.1093/jxb/eraa302⟩. ⟨hal-02904041⟩
  • Martine Lemaire-Chamley, Fabien Mounet, Catherine Deborde, Mickael Maucourt, Daniel Jacob, et al.. NMR-Based Tissular and Developmental Metabolomics of Tomato Fruit.. Metabolites, MDPI, 2019, 9 (5), ⟨10.3390/metabo9050093⟩. ⟨hal-02621416⟩
  • Catherine Deborde, Jean-Xavier Fontaine, Daniel Jacob, Adolfo Botana, Valerie Nicaise, et al.. Optimizing 1D 1H-NMR profiling of plant samples for high throughput analysis: extract preparation, standardization, automation and spectra processing. Metabolomics, Springer Verlag, 2019, 15 (3), pp.1-12. ⟨10.1007/s11306-019-1488-3⟩. ⟨hal-02622523⟩
  • Kentaro Mori, Bertrand Beauvoit, Benoit Biais, Maxime Chabane, J. William Allwood, et al.. Central Metabolism Is Tuned to the Availability of Oxygen in Developing Melon Fruit. Frontiers in Plant Science, Frontiers, 2019, 10, pp.594. ⟨10.3389/fpls.2019.00594⟩. ⟨hal-02621412⟩
  • Olivier Fernandez, Maria Urrutia, Thierry Berton, Stéphane Bernillon, Catherine Deborde, et al.. Metabolomic characterization of sunflower leaf allows discriminating genotype groups or stress levels with a minimal set of metabolic markers. Metabolomics, Springer Verlag, 2019, 15 (4), pp.56. ⟨10.1007/s11306-019-1515-4⟩. ⟨hal-02487236⟩
  • Francois Joël Gatesoupe, Benoit Fauconneau, Catherine Deborde, Blandine Madji Hounoum, Daniel Jacob, et al.. Intestinal microbiota in rainbow trout, Oncorhynchus mykiss, fed diets with different levels of fish-based and plant ingredients: A correlative approach with some plasma metabolites. Aquaculture Nutrition, Wiley, 2018, 24 (5), pp.1563-1576. ⟨10.1111/anu.12793⟩. ⟨hal-01901326⟩
  • Nadia Lamari, Vanessa Zhendre, Maria Urrutia, Stéphane Bernillon, Mickael Maucourt, et al.. Metabotyping of 30 maize hybrids under early-sowing conditions reveals potential marker-metabolites for breeding. Metabolomics, Springer Verlag, In press, 14 (10), pp.132. ⟨10.1007/s11306-018-1427-8⟩. ⟨hal-02539641⟩
  • Simon Roques, Catherine Deborde, Nadège Richard, Luce Sergent, Francis Kurz, et al.. Characterizing alternative feeds for rainbow trout (O. mykiss) by 1 H NMR metabolomics. Metabolomics, Springer Verlag, 2018, 14 (12), pp.155. ⟨10.1007/s11306-018-1454-5⟩. ⟨hal-02141406⟩
  • Rebecca Stevens, Pierre Baldet, Jean-Paul Bouchet, Mathilde Causse, Catherine Deborde, et al.. A systems biology study in tomato fruit reveals correlations between the ascorbate pool and genes involved in ribosome biogenesis, translation, and the heat-shock response. Frontiers in Plant Science, Frontiers, 2018, 9 (137), 16 p. ⟨10.3389/fpls.2018.00137⟩. ⟨hal-01721265⟩
  • Daniel Schober, Daniel Jacob, Michael Wilson, Joseph A Cruz, Ana Marcu, et al.. nmrML: a community supported open data standard for the description, storage, and exchange of NMR data.. Analytical Chemistry, American Chemical Society, 2018, 90 (1), pp.649-656. ⟨10.1021/acs.analchem.7b02795⟩. ⟨hal-02621139⟩
  • Rita Wedeking, Mickael Maucourt, Catherine Deborde, Annick Moing, Yves Gibon, et al.. 1H-NMR metabolomic profiling reveals a distinct metabolic recovery response in shoots and roots of temporarily drought-stressed sugar beets.. PLoS ONE, Public Library of Science, 2018, 13 (5), pp.e0196102. ⟨10.1371/journal.pone.0196102⟩. ⟨hal-02622637⟩
  • Vessela Atanasova-Penichon, Laurie Legoahec, Stéphane Bernillon, Catherine Deborde, Mickael Maucourt, et al.. Mycotoxin biosynthesis and central metabolism are two interlinked pathways in Fusarium graminearum, as demonstrated by the extensive metabolic changes induced by caffeic acid exposure.. Applied and Environmental Microbiology, American Society for Microbiology, 2018, 84 (8), pp.1-20. ⟨10.1128/AEM.01705-17⟩. ⟨hal-02621110⟩
  • Stéphane Bernillon, Mickael Maucourt, Catherine Deborde, Sylvain Chereau, Daniel Jacob, et al.. Characterization of GMO or glyphosate effects on the composition of maize grain and maize-based diet for rat feeding. Metabolomics, Springer Verlag, 2018, 14 (36), pp.1-12. ⟨10.1007/s11306-018-1329-9⟩. ⟨hal-02624451⟩
  • Daniel Jacob, Catherine Deborde, Marie Lefebvre, Mickael Maucourt, Annick Moing. NMRProcFlow: a graphical and interactive tool dedicated to 1D spectra processing for NMR-based metabolomics. Metabolomics, Springer Verlag, 2017, 13 (4), pp.36. ⟨10.1007/s11306-017-1178-y⟩. ⟨hal-01606304⟩
  • Catherine Deborde, Annick Moing, Léa Roch, Daniel Jacob, Dominique Rolin, et al.. Plant metabolism as studied by NMR spectroscopy. Progress in Nuclear Magnetic Resonance Spectroscopy, Elsevier, 2017, 102-103, pp.61-97. ⟨10.1016/j.pnmrs.2017.05.001⟩. ⟨hal-01602524⟩
  • Aurélien Bornet, Mickael Maucourt, Catherine Deborde, Daniel Jacob, Jonas Milani, et al.. Highly Repeatable Dissolution Dynamic Nuclear Polarization for Heteronuclear NMR Metabolomics. Analytical Chemistry, American Chemical Society, 2016, 88 (12), pp.6179-6183. ⟨10.1021/acs.analchem.6b01094⟩. ⟨hal-01366193⟩
  • Alessandro Botton, Angela Rasori, Fiorenza Ziliotto, Annick Moing, Mickael Maucourt, et al.. The peach HECATE3-like gene FLESHY plays a double role during fruit development.. Plant Molecular Biology, Springer Verlag (Germany), 2016, 91 (1-2), pp.97-114. ⟨10.1007/s11103-016-0445-z⟩. ⟨hal-02636594⟩
  • Jean-Nicolas Dumez, Jonas Milani, Basile Vuichoud, Aurélien Bornet, Julie Lalande-Martin, et al.. Hyperpolarized NMR of plant and cancer cell extracts at natural abundance. Analyst, Royal Society of Chemistry, 2015, 140 (17), pp.5860-5863. ⟨10.1039/c5an01203a⟩. ⟨hal-01366194⟩
  • Tomás Grevenstuk, Annick Moing, Mickael Maucourt, Catherine Deborde, Anabela Romano. Aluminium stress disrupts metabolic performance of Plantago almogravensis plantlets transiently.. BioMetals, Springer Verlag, 2015, 28 (6), pp.997-1007. ⟨10.1007/s10534-015-9884-2⟩. ⟨hal-02631872⟩
  • Reza Salek, Steffen Neumann, Daniel Schober, Jan Hummel, Kenny Billiau, et al.. Erratum to: COordination of Standards in MetabOlomicS (COSMOS): facilitating integrated metabolomics data access. Metabolomics, Springer Verlag, 2015, 11 (6), pp.1598-1599. ⟨10.1007/s11306-015-0822-7⟩. ⟨hal-02630736⟩
  • Reza Salek, Steffen Neumann, Daniel Schober, Jan Hummel, Kenny Billiau, et al.. COordination of Standards in MetabOlomicS (COSMOS): facilitating integrated metabolomics data access. Metabolomics, Springer Verlag, 2015, 11 (6), pp.Journal no. 11306. ⟨10.1007/s11306-015-0810-y⟩. ⟨hal-01165673⟩
  • Tangi Jézéquel, Catherine Deborde, Mickael Maucourt, Vanessa Zhendre, Annick Moing, et al.. Absolute quantification of metabolites in tomato fruit extracts by fast 2D NMR. Metabolomics, Springer Verlag, 2015, 11 (5), pp.1131-1142. ⟨10.1007/s11306-015-0780-0⟩. ⟨hal-02638209⟩
  • Camille Bénard, Stéphane Bernillon, Benoit Biais, Sonia Osorio, Mickael Maucourt, et al.. Metabolomic profiling in tomato reveals diel compositional changes in fruit affected by source-sink relationships.. Journal of Experimental Botany, Oxford University Press (OUP), 2015, 66 (11), pp.3391-404. ⟨10.1093/jxb/erv151⟩. ⟨hal-02641303⟩
  • Fabien Baldacci-Cresp, Mickael Maucourt, Catherine Deborde, Olivier Pierre, Annick Moing, et al.. Maturation of nematode-induced galls in Medicago truncatula is related to water status and primary metabolism modifications.. Plant Science, Elsevier, 2015, 232, pp.77-85. ⟨10.1016/j.plantsci.2014.12.019⟩. ⟨hal-02630314⟩
  • J. William Allwood, William Cheung, Yun Xu, Roland Mumm, Ric C. H. de Vos, et al.. Metabolomics in melon: a new opportunity for aroma analysis. Phytochemistry, Elsevier, 2014, 99, pp.61-72. ⟨10.1016/j.phytochem.2013.12.010⟩. ⟨hal-02636046⟩
  • Stéphane Bernillon, Benoit Biais, Catherine Deborde, Mickael Maucourt, Cécile Cabasson, et al.. Metabolomic and elemental profiling of melon fruit quality as affected by genotype and environment. Metabolomics, Springer Verlag, 2013, 9 (1), pp.57-77. ⟨10.1007/s11306-012-0429-1⟩. ⟨hal-02651407⟩
  • Daniel Jacob, Catherine Deborde, Annick Moing. An efficient spectra processing method for metabolite identification from (1)H-NMR metabolomics data.. Analytical and Bioanalytical Chemistry, Springer Verlag, 2013, 405 (15), pp.5049-61. ⟨10.1007/s00216-013-6852-y⟩. ⟨hal-02648547⟩
  • Laura Pascual-Banuls, Jiaxin Xu, Benoit Biais, Mickael Maucourt, Patricia Ballias, et al.. Deciphering genetic diversity and inheritance of tomato fruit weight and composition through a systems biology approach. Journal of Experimental Botany, Oxford University Press (OUP), 2013, 64 (18), pp.1-16. ⟨10.1093/jxb/ert349⟩. ⟨hal-01208665⟩
  • M.N. Calingacion, C. Boualaphanh, V.D. Daygon, R. Anacleto, R. Sackville Hamilton, et al.. A genomics and multi-platform metabolomics approach to identify new traits of rice quality in traditional and improved varieties. Metabolomics, Springer Verlag, 2012, 8 (5), pp.771-783. ⟨10.1007/s11306-011-0374-4⟩. ⟨hal-02651386⟩
  • Fabien Baldacci, Christine Chang, Mickael Maucourt, Catherine Deborde, Julie Hopkins, et al.. (Homo)glutathione deficiency impairs root-knot nematode development in Medicago truncatula. PLoS Pathogens, Public Library of Science, 2012, 8 (1), pp.e1002471. ⟨10.1371/journal.ppat.1002471⟩. ⟨hal-02647565⟩
  • Yosra Ben Akal-Ben Fatma, Katia Pianelli, Martine Dieuaide Noubhani, Aline Le Menn, Catherine Deborde, et al.. 1H-NMR metabolomics: Profiling method for a rapid and efficient screening of transgenic plants. African Journal of Biotechnology, Academic Journals, 2012, 11 (52), pp.11386-11399. ⟨10.5897/AJB12.088⟩. ⟨hal-02643145⟩
  • Fabien Mounet, Annick Moing, Mariusz Kowalczyk, Johannes Rohrmann, Johann Petit, et al.. Down-regulation of a single auxin efflux transport protein in tomato induces precocious fruit development. Journal of Experimental Botany, Oxford University Press (OUP), 2012, 63 (13), pp.4901-4917. ⟨10.1093/jxb/ers167⟩. ⟨hal-01000616⟩
  • Sergio Jiménez, Nathalie Ollat, Catherine Deborde, Mickael Maucourt, Yolenda Gogorcena. Metabolic response in roots of Prunus rootstocks submitted to iron chlorosis. Journal of Plant Physiology, Elsevier, 2011, 168 (5), pp.415-423. ⟨10.1016/j.jplph.2010.08.010⟩. ⟨hal-02647058⟩
  • Hélène Ferry-Dumazet, Laurent Gil, Catherine Deborde, Annick Moing, Stéphane Bernillon, et al.. MeRy-B: a web knowledgebase for the storage, visualization, analysis and annotation of plant NMR metabolomic profiles.. BMC Plant Biology, BioMed Central, 2011, 11, pp.104. ⟨10.1186/1471-2229-11-104⟩. ⟨hal-00645944⟩
  • Anne-Maïmiti Dulaurent, Jean-Pierre Rossi, Catherine Deborde, Annick Moing, Pierre Menassieu, et al.. Honeydew feeding increased the longevity of two egg parasitoids of the pine processionary moth. Journal of Applied Entomology, Wiley, 2011, 135 (3), pp.184-194. ⟨10.1111/j.1439-0418.2010.01547.x⟩. ⟨hal-02652483⟩
  • H. Ferry-Dumazet, L. Gil, C. Deborde, A. Moing, S. Bernillon, et al.. MeRy-B: a web knowledgebase for the storage, visualization, analysis and annotation of plant 1H-NMR metabolomic profiles. BMC Plant Biology, BioMed Central, 2011, 11:104, pp.10.1186/1471-2229-11-104. ⟨hal-00648167⟩
  • Annick Moing, Asaph Aharoni, Benoit Biais, Ilana Rogachev, Sagit Meir, et al.. Extensive metabolic cross-talk in melon fruit revealed by spatial and developmental combinatorial metabolomics. New Phytologist, Wiley, 2011, 190 (3), pp.683-696. ⟨10.1111/j.1469-8137.2010.03626.x⟩. ⟨hal-02644457⟩
  • Mohamed Hichem Neily, Chiaki Matsukura, Mickael Maucourt, Stéphane Bernillon, Catherine Deborde, et al.. Enhanced polyamine accumulation alters carotenoid metabolism at the transcriptional level in tomato fruit over-expressing spermidine synthase. Journal of Plant Physiology, Elsevier, 2011, 168 (3), pp.242-252. ⟨10.1016/j.jplph.2010.07.003⟩. ⟨hal-02647454⟩
  • Benoit Biais, Bertrand Beauvoit, William Allwood, Catherine Deborde, Mickael Maucourt, et al.. Metabolic acclimation to hypoxia revealed by metabolite gradients in melon fruit. Journal of Plant Physiology, Elsevier, 2010, 167 (3), pp.242-245. ⟨10.1016/j.jplph.2009.08.010⟩. ⟨hal-02667147⟩
  • Jane L. Ward, John M. Baker, Sonia J. Miller, Catherine Deborde, Mickael Maucourt, et al.. An inter-laboratory comparison demonstrates that [1H]-NMR metabolite fingerprinting is a robust technique for collaborative plant metabolomic data collection. Metabolomics, Springer Verlag, 2010, 6 (2), pp.263-273. ⟨10.1007/s11306-010-0200-4⟩. ⟨hal-02667728⟩
  • Hédia Hédiji, Wahbi Djebali, Cécile Cabasson, Mickael Maucourt, Pierre Baldet, et al.. Effects of long-term cadmium exposure on growth and metabolomic profile of tomato plants. Ecotoxicology and Environmental Safety, Elsevier, 2010, 73 (8), pp.1965-1974. ⟨10.1016/j.ecoenv.2010.08.014⟩. ⟨hal-02668879⟩
  • Virginie Garcia, Rebecca Stevens, Laurent Gil, Louise Gilbert, Noé Gest, et al.. An integrative genomics approach for deciphering the complex interactions between ascorbate metabolism and fruit growth and composition in tomato.. Comptes Rendus Biologies, Elsevier Masson, 2009, 332 (11), pp.1007-21. ⟨10.1016/j.crvi.2009.09.013⟩. ⟨hal-00645936⟩
  • Fabien Mounet, Annick Moing, Virginie Garcia, Johann Petit, Mickael Maucourt, et al.. Gene and Metabolite Regulatory Network Analysis of Early Developing Fruit Tissues Highlights New Candidate Genes for the Control of Tomato Fruit Composition and Development. Plant Physiology, American Society of Plant Biologists, 2009, 149 (3), pp.1505-1528. ⟨10.1104/pp.108.133967⟩. ⟨hal-02666886⟩
  • Cécile Cabasson, Stéphane Bernillon, Catherine Deborde. La Métabolomique appliquée à l'étude de la physiologie de la tomate : démarche et perspectives. Spectra Analyse, Paris : PCI, 2009, 271, pp.26-31. ⟨hal-02656881⟩
  • Benoit Biais, William Allwood, Catherine Deborde, Yun Xu, Mickael Maucourt, et al.. 1H NMR, GC−EI-TOFMS, and data set correlation for fruit metabolomics: application to spatial metabolite analysis in melon. Analytical Chemistry, American Chemical Society, 2009, 81 (8), pp.2884-2894. ⟨10.1021/ac9001996⟩. ⟨hal-02662211⟩
  • Catherine Deborde, Mickael Maucourt, Pierre Baldet, Stéphane Bernillon, Benoit Biais, et al.. Proton NMR quantitative profiling for quality assessment of greenhouse-grown tomato fruit. Metabolomics, Springer Verlag, 2009, 5 (2), pp.183-198. ⟨10.1007/s11306-008-0134-2⟩. ⟨hal-02664640⟩
  • Magalie Cossegal, Pierre Chambrier, Sylvie Mbelo, S. Balzergue, Marie-Laure Martin-Magniette, et al.. Transcriptional and Metabolic Adjustments in ADP-Glucose pyrophosphorylase -deficient bt2 Maize kernels. Plant Physiology, American Society of Plant Biologists, 2008, 146 (4), pp.1553-1570. ⟨10.1104/pp.107.112698⟩. ⟨hal-00412597⟩
  • Fabien Mounet, Martine Lemaire, Mickael Maucourt, Cécile Cabasson, Jean-Luc Giraudel, et al.. Quantitative metabolic profiles of tomato flesh and seeds during fruit development: complementary analysis with ANN and PCA. Metabolomics, Springer Verlag, 2007, 3 (3), pp.273-288. ⟨10.1007/s11306-007-0059-1⟩. ⟨hal-02667259⟩
  • Giuliano Elias Pereira, Jean-Pierre Gaudillere, Cornelis van Leeuwen, Ghislaine Hilbert, Mickael Maucourt, et al.. 1H-NMR metabolic profiling of wines from three cultivars, three soil types and two contrasting vintages. Journal International des Sciences de la Vigne et du Vin, 2007, 42 (2), pp.103-109. ⟨hal-02655666⟩
  • Fabien Mounet, Martine Lemaire-Chamley, Mickael Maucourt, Cécile Cabasson, Jean-Luc Giraudel, et al.. Quantitative metabolic profiles of tomato flesh and seeds during fruit development: complementary analysis with ANN and PCA.. Metabolomics, Springer Verlag, 2007. ⟨hal-00138461⟩
  • Giuliano E. Pereira, Jean-Pierre Gaudillere, Cornelis van Leeuwen, Ghislaine Hilbert, Mickael Maucourt, et al.. 1H NMR metabolite fingerprints of grape berry : comparison of vintage and soil effects in Bordeaux grapevine growing areas. Analytica Chimica Acta, Elsevier Masson, 2006, 563 (1-2), pp.346-352. ⟨10.1016/j.aca.2005.11.007⟩. ⟨hal-02663000⟩
  • Anne Cazor, Catherine Deborde, Annick Moing, Dominique Rolin, Hervé This. Sucrose, glucose, and fructose extraction in aqueous carrot root extracts prepared at different temperatures by means of direct NMR measurements. Journal of Agricultural and Food Chemistry, American Chemical Society, 2006, 54 (13), pp.4681-4686. ⟨10.1021/jf060144i⟩. ⟨hal-01627200⟩
  • Giuliano E. Pereira, Jean-Pierre Gaudillere, Philippe Pieri, Ghislaine Hilbert, Mickael Maucourt, et al.. Microclimate influence on mineral and metabolic profiles of grape berries. Journal of Agricultural and Food Chemistry, American Chemical Society, 2006, 54 (18), pp.6765-6775. ⟨10.1021/jf061013k⟩. ⟨hal-02663721⟩
  • Giuliano Pereira, Jean-Pierre Gaudillère, Cornelis van Leeuwen, Ghislaine Hilbert, Olivier Lavialle, et al.. 1H NMR and Chemometrics to characterize mature grape berries in four winegrowing areas in Bordeaux-France.. Journal of Agricultural and Food Chemistry, American Chemical Society, 2005, 53 (16), pp.6382-6389. ⟨hal-00400128⟩
  • Giuliano E. Pereira, Jean-Pierre Gaudillere, Cornelis van Leeuwen, Ghislaine Hilbert, Mickael Maucourt, et al.. 1H NMR and chemometrics to characterize mature grape berries in four wine-growing areas in Bordeaux, France. Journal of Agricultural and Food Chemistry, American Chemical Society, 2005, 53 (16), pp.6382-6389. ⟨10.1021/jf058058q⟩. ⟨hal-02682189⟩
  • Guillaume Meurice, Daniel Jacob, Catherine Deborde, Stéphane Chaillou, Annette Rouault, et al.. Whole genome sequencing project of a dairy Propionibacterium freudenreichii subsp. shermanii genome: progress and first bioinformatic analysis. Le Lait, INRA Editions, 2004, 84 (1-2), pp.15-24. ⟨10.1051/lait:2003041⟩. ⟨hal-00895526⟩
  • Catherine Deborde, Patrick Boyaval. Interactions between pyruvate abd lactate metabolism in Propionibacterium freudenreichii subsp. shermanii: in vivo 13C nuclear magnetic resinance studies. Applied and Environmental Microbiology, American Society for Microbiology, 2000, 66 (5), pp.2012-2020. ⟨hal-02689412⟩
  • Patrick Boyaval, Catherine Deborde, Christian Corre, Carlos Blanco, Élisabeth Bégué. Stress and osmoprotection in propionibacteria:. Le Lait, INRA Editions, 1999, 79 (1), pp.59-69. ⟨hal-00929637⟩
  • Catherine Deborde, D.B. Rolin, Patrick Boyaval. In vivo 13C NMR study of the bidirectional reactions of the wood-werkman cycle and around the Pyruvate node in Propionibacterium freudenreichii subsp. shermanii and Propionibacterium acidipropionici. Metabolic Engineering, Elsevier, 1999, 1, pp.309-319. ⟨hal-02698703⟩
  • Patrick Boyaval, Catherine Deborde, C. Corre, C. Blanco, E. Bégué. Stress and osmoprotection in propionibacteria (trehalose, glycine-betaine). Lait, Elsevier, 1999, 79 (1), pp.59-69. ⟨hal-02698841⟩
  • Catherine Deborde, D.B. Rolin, Arnaud Bondon, J. de Certaines, Patrick Boyaval. In vivo nuclear magnetic resonance study of citrate metabolism in Propionibacterium freudenreichii subsp. shermanii. Journal of Dairy Research, Cambridge University Press (CUP), 1998, 65 (3), pp.503-514. ⟨hal-02689684⟩
  • Catherine Deborde, D. Salvat-Brunaud, Anne Thierry, D.B. Rolin, Patrick Boyaval. Etude du métabolisme des bactéries propioniques laitières par RMN in vitro. Analusis, EDP Sciences, 1997, 25 (1), pp.15-20. ⟨hal-02695823⟩
  • Catherine Deborde, C. Corre, D.B. Rolin, L. Nadal, J.D. de Certaines, et al.. Trehalose biosynthesis in dairy Propionibacterium. Journal of magnetic resonance analysis, 1996, 2, pp.297-304. ⟨hal-02688859⟩

Conference papers108 documents

  • Simon Roques, Catherine Deborde, Nadege Richard, Sandrine Skiba-Cassy, Annick Moing, et al.. Exploring the adaptation of rainbow trout metabolome to novel aquafeeds by H-NMR metabolomics. Metabolomics 2019. 15. Annual Conference of the Metabolomics Society, Jun 2019, La Haye, Netherlands. ⟨hal-02154627⟩
  • Catherine Deborde, Daniel Jacob, J.X. Fontaine, R. Molinie, Léa Roch, et al.. An overview of NMR applications in metabolite profiling of small molecules for plant metabolism studies. 2. International Plant Spectroscopy Conference (IPSC), Mar 2019, Berlin, Germany. ⟨hal-02786819⟩
  • Catherine Deborde, Daniel Jacob, Simon Roques, Léa Roch, Anaïs Clave, et al.. NMR-based metabolomics at Bordeaux Metabolome Facility: 4 short stories. A Franco-Israeli Symposium in Magnetic Resonance, Jan 2019, Rehovot, Israel. ⟨hal-02786826⟩
  • Sylvain Chereau, Vessela Atanasova-Penichon, Laurie Legoahec, Stéphane Bernillon, Catherine Deborde, et al.. Mycotoxin biosynthesis and central metabolism are two interlinked pathways in Fusarium graminearum, as demonstrated by the extensive metabolic changes induced by caffeic acid exposure. 14. European Fusarium Seminar, Universität für Bodenkultur Wien [Vienne, Autriche] (BOKU). AUT., Apr 2018, Tulln, Austria. 122 p. ⟨hal-02737991⟩
  • Simon Roques, Catherine Deborde, Nadège Richard, Sandrine Skiba-Cassy, Annick Moing, et al.. 1H-NMR metabolomic investigation of the effect of alternative diets on rainbow trout plasma profiles. World Aquaculture 2018, European Aquaculture Society (EAS)., Aug 2018, Montpellier, France. 848 p. ⟨hal-01913018⟩
  • Catherine Deborde, Blandine Madji Hounoum, Daniel Jacob, Mickael Maucourt, Simon Roques, et al.. NMR-based metabolomics workflow for quality and effect assessment of alternative plant-based diets in rainbow trout.. 11èmes JS du Réseau Francophone de Métabolomique et Fluxomique, May 2018, Liège, Belgium. ⟨hal-03058513⟩
  • Cecile Cabasson, Sophie Colombie, Bertrand Beauvoit, Christine Nazaret, Camille Benard, et al.. Integrative and predictive biology outside the plant: linking computational tools to fleshy fruit systems. Colloque Biologie synthétique et systémique, BioSynSys, Jun 2016, Bordeaux, France. ⟨hal-02739719⟩
  • Benoit Fauconneau, Geneviève Corraze, Françoise Médale, Catherine Deborde, Annick Moing. Apport des approches de métabolomique sur l'adaptation des poissons à une alimentation durable. 7. Journées Scientifiques Internationales sur la Valorisation des Bioressources, Apr 2016, Sousse, Tunisie. ⟨hal-01901296⟩
  • Maria Urrutia Rosauro, B. Bernillon, M. Maucourt, Catherine Deborde, Daniel Jacob, et al.. Leaf marker metabolites for low nitrogen stress in maize. Plant Biology Europe EPSO/FESPB 2016, Jun 2016, Prague, Czech Republic. ⟨hal-01605806⟩
  • Aurélien Bornet, Jean-Nicolas Dumez, Jonas Milani, Basile Vuichoud, Julie Lalande-Martin, et al.. Hyperpolarized NMR metabolomics. 10. journées scientifiques du Réseau Francophone de Métabolomique et Fluxomique RFMF 2016, Réseau Francophone de Métabolomique et Fluxomique (RFMF). FRA., May 2016, Monpellier, France. ⟨hal-02740469⟩
  • Antoine Escourrou, Vessela Atanasova-Penichon, Sylvain Chereau, Magalie Moinard-Monmarson, Stéphane Bernillon, et al.. Diversité des empreintes métabolomiques en lien avec le potentiel toxinogène chez le champignon phytopathogène Fusarium graminearum. 9. Journées scientifiques du RFMF, Réseau Francophone de Métabolomique et Fluxomique (RFMF). FRA., Jun 2015, Lille, France. ⟨hal-02742557⟩
  • Catherine Deborde, Annick Moing, Valentin Joubert, Blandine Madji Hounoum, Daniel Jacob, et al.. Development of Metabolomics Approaches for Quality Assessment of Plant-Based Diet in Rainbow Trout. Meeting Abstracts, 2015, Rotterdam, NLD, Unknown Region. pp.252-253. ⟨hal-02139685⟩
  • Fatima Adra, Gilles Vercambre, Daniel Plénet, Benedicte Jamin Bakan, Agathe Noblet, et al.. Consequences of high temperatures and drought on peach fruit production strongly depends on their period of occurence. Climate-Smart Agriculture 2015 : Global Science Conference, Mar 2015, Montpellier, France. ⟨hal-01603456⟩
  • Catherine Deborde, Annick Moing, Valentin Joubert, Blandine Madji Hounoum, Daniel Jacob, et al.. Development of metabolomics approaches for quality assessment of plant-based diet in rainbow trout. Aquaculture Europe 2015, European Aquaculture Society (EAS). BEL., Oct 2015, Rotterdam, Netherlands. ⟨hal-02740877⟩
  • Patrick Giraudeau, Tangi Jézéquel, Catherine Deborde, Mickael Maucourt, Annick Moing. Absolute quantitative metabolomics of plant extracts by fast 2D NMR. 56. Experimental Nuclear Magnetic Resonance Conference, Apr 2015, Pacific Grove, United States. ⟨hal-01605080⟩
  • Tangi Jézéquel, Catherine Deborde, Mickael Maucourt, Vanessa Zhendre, Annick Moing, et al.. RMN 2D rapide pour la métabolomique quantitative ciblée d'extraits végétaux. 9. Journées scientifiques du RFMF, Réseau Francophone de Métabolomique et Fluxomique (RFMF). FRA., Jun 2015, Lille, France. ⟨hal-02743962⟩
  • Sophie Colombie, Bertrand Beauvoit, Dominique Rolin, Stéphane Bernillon, Camille Bénard, et al.. Using metabolomic approaches and modelling of central metabolic to study fleshy fruit quality. 1. International Symposium on Metabolomics in Mexico, Jun 2015, Guadalajara, Mexico. 2 p. ⟨hal-02800371⟩
  • Dominique Rolin, Bertrand Beauvoit, Stéphane Bernillon, Camille Bénard, Patricia Ballias, et al.. La métabolomique : un outil de la génomique fonctionnelle au service de la biologie des systèmes. 8e Congrès Jeunes Chercheurs de la SFBV, Société Française de Biologie Végétale (SFBV). FRA., Jun 2014, Tours, France. 1 p. ⟨hal-02801036⟩
  • Laurie Legoahec, Vessela Atanasova-Penichon, Nadia Ponts, Catherine Deborde, Mickael Maucourt, et al.. Metabolomics of growth and type B trichothecenes production in Fusarium graminearum. 12. European conference on fungal genetics - Fusarium satellite meeting, Mar 2014, Séville, Spain. ⟨hal-02793632⟩
  • Camille Bénard, Stéphane Bernillon, Benoit Biais, Sonia Osorio-Algar, Mickael Maucourt, et al.. Using developmental and diurnal compositional changes of tomato to study metabolism. 8. Journées Scientifiques du Réseau Français de Métabolomique et Fluxomique RFMF, May 2014, Lyon, France. 1 p. ⟨hal-02793195⟩
  • Dominique Rolin, F. Belvert, J Bertrand-Michel, Richard Cole, Sophie Colombie, et al.. MetaboHUB and RFMF : two tools at the service of metabolomics and fluxomics in France. MERLION Metabolomics Workshop Singapore 2014, Nov 2014, Singapour, Singapore. ⟨hal-02798242⟩
  • Laura Pascual, Jiaxin Xu, Nelly Desplat, Yves Gibon, Annick Moing, et al.. Combining systems biology, genome resequencing and MAGIC population to decipher the genetic variation of tomato fruit quality. 10. Solanaceae conference (SOL 2013), Oct 2013, Beijing, China. ⟨hal-02750138⟩
  • Camille Benard, Stéphane Bernillon, Sonia Osorio-Algar, Mickael Maucourt, Benoit Biais, et al.. Diurnal compositional changes of tomato fruit and leaf. Metabolomics 2013, Jul 2013, Glasgow, United Kingdom. 1 p. ⟨hal-02803658⟩
  • Daniel Jacob, Catherine Deborde, Annick Moing. ERVA: a novel method of binning, allowing chemical information to be highlighted, from 1H-NMR metabolics data. 7. Journées scientifiques du Réseau Français de Métabolomique et Fluxomique, Jun 2013, Amiens, France. 1 p. ⟨hal-02805015⟩
  • A. Rasori, Mickael Maucourt, Stéphane Bernillon, Catherine Deborde, Annick Moing, et al.. Metabolomic and molecular profiling of a slow ripening peach selection reveals new mechanisms controlling mesocarp development. 8. International Peach Symposium, International Society for Horticultural Science (ISHS). INT., Jun 2013, Matera, Italy. ⟨hal-02808354⟩
  • Dominique Rolin, Alice Agasse, Justine Bertrand-Michel, R. Cole, B. Colsch, et al.. MetaboHUB: a national infrastructure dedicated to metabolomics and fluxomics. 7. Journées scientifiques du Réseau Français de Métabolomique et de Fluxomique (RFMF), Jun 2013, Amiens, France. ⟨hal-01002241⟩
  • Dominique Rolin, Alice Agasse, Justine Bertrand-Michel, R. Cole, B. Colsch, et al.. MetaboHUB: une infrastructure nationale au service de la métabolomique. Séance thématique "La métabolomique : son application en recherche pharmaceutique et diagnostique", Académie Nationale de Pharmacie. FRA., Feb 2013, Paris, France. ⟨hal-01002248⟩
  • Dominique Rolin, Alice Agasse, Justine Bertrand-Michel, R. Cole, Sophie Colombie, et al.. MetaboHUB: a french infrastructure dedicated to metabolomics and fluxomics. Metabolomics 2013 - 9. Annual conference of the Metabolomics Society, Jul 2013, Glasgow, United Kingdom. ⟨hal-01002247⟩
  • Cécile Cabasson, Ousmane Harouna Kore, Catherine Deborde, Mickael Maucourt, Annick Moing, et al.. Compositional changes of tomato seeds during development and maturation. 6. Journées Scientifiques du Réseau Français de Métabolomique et Fluxomique (RFMF), May 2012, Nantes, France. p. 60. ⟨hal-02807332⟩
  • Jiaxin Xu, Laura Pascual, Nelly Desplat, Mireille Faurobert, Yves Gibon, et al.. A multi-Ievel omic approach of tomato fruit quality. 2. Symposium on Horticulture in Europe, Jul 2012, Angers, France. ⟨hal-02748459⟩
  • Camille Bénard, Dominique Rolin, Stéphane Bernillon, Mickael Maucourt, Benoit Biais, et al.. Metabolomics data integration in tomato plant-fruit systems biology. Metabolomics-2012, International Conference and Exhibition on Metabolomics & Systems Biology, Feb 2012, San Francisco, United States. ⟨hal-02803433⟩
  • Camille Benard, Stéphane Bernillon, Mickael Maucourt, Benoit Biais, Sonia Osorio-Algar, et al.. Variation journalière de la composition métabolique de fruit de tomate en cours de maturation. 5. Journées scientifiques du Réseau Français de Métabolomique et Fluxomique, Labo/service de l'auteur, Ville service., May 2011, Paris, France. ⟨hal-02749748⟩
  • Christophe Rothan, Nicolas Viron, Louise Gilbert, Fabien Mounet, Virginie Garcia, et al.. Towards the control of fruit sensorial and nutritional quality in tomato: functional genomics approaches. Colloque Biogenouest, Apr 2011, Angers, France. ⟨hal-02805441⟩
  • Hédia Hédiji, Cécile Cabasson, Wahbi Djebali, Annick Moing, Mickael Maucourt, et al.. Profils métaboliques du fruit de tomate au cours de sa maturation en présence de cadmium. 5. Journées scientifiques du Réseau Français de Métabolomique et Fluxomique, Labo/service de l'auteur, Ville service., May 2011, Paris, France. ⟨hal-02746272⟩
  • Daniel Jacob, Catherine Deborde, Stéphane Bernillon, Annick Moing. Développement d'outils informatiques pour le traitement et l'analyse des données en RMN-1H, dans un contexte d'expériences métabolomiques. 5. Journées scientifiques du Réseau Français de Métabolomique et Fluxomique, Labo/service de l'auteur, Ville service., May 2011, Paris, France. ⟨hal-02747402⟩
  • Catherine Deborde, Stéphane Bernillon, Mickael Maucourt, Cécile Cabasson, Benoit Biais, et al.. Tools and applications in plant metabolomics at Bordeaux Metabolome Fluxome Facility (PMFB; http://www.bordeaux.inra.fr/umr619/NMR.htm). 5. Journées scientifiques du Réseau Français de Métabolomique et Fluxomique, Labo/service de l'auteur, Ville service., May 2011, Paris, France. ⟨hal-02749839⟩
  • Jean-Luc Poëssel, Marie-Hélène Sauge, Michael Staudt, Claire Dufour, Catherine Deborde, et al.. Metabolite profiling and feeding bioassays suggest a major role for a dicaffeoylquinic acid in induced resistance of peach to Myzus persicae aphid. PRIR 2011 Joint International Workshop: "PR-proteins Workshop" and the "Working Group Induced Resistance in Plants Against Insects and Diseases", Sep 2011, Neuchâtel, Switzerland. ⟨hal-01338895⟩
  • Juan Valverde, Padraig Mcloughlin, Kim Reilly, Michael Gaffney, Catherine Deborde, et al.. Quality assessment of broccoli florets by 500 MHz-1H NMR profiling. Metabolomics 2010, Jun 2010, Amsterdam, Netherlands. ⟨hal-02756439⟩
  • Nathalie Ollat, Catherine Deborde, Christel Renaud, Mickael Maucourt, Stéphanie Doumouya, et al.. Biochemical phenotyping of Vitis by 1H-NMR profiling and targeted enzymatic analysis. Metabolomics 2010, Jun 2010, Amsterdam, Netherlands. ⟨hal-02753834⟩
  • Nathalie Ollat, Catherine Deborde, Christel Renaud, Mickael Maucourt, Stéphanie Doumouya, et al.. Intra and interspecific biochemical phenotyping of Vitis. 4. Journées scientifiques du Réseau Français de Métabolomique et Fluxomique, May 2010, Marseille, France. ⟨hal-02757382⟩
  • Yaakov Tadmor, Nurit Katzir, Josef Burger, Vitaly Portnoy, Tamar Lahav, et al.. Comparative intraspecific metabolomic and genomic variation analyses in Cucumis melo. Metabolomics 2010, Jun 2010, Amsterdam, Netherlands. ⟨hal-02757926⟩
  • Hélène Ferry-Dumazet, Laurent Gil, Catherine Deborde, Annick Moing, Stéphane Bernillon, et al.. Mery-B: a web knowledgebase for the storage, visualization, analysis and annotation of plant metabolomics profiles obtained by NMR. Metabolomics 2010, Jun 2010, Amsterdam, Netherlands. ⟨hal-02755793⟩
  • Catherine Deborde, Stéphane Bernillon, Mickael Maucourt, Cécile Cabasson, Isabelle Quintana, et al.. Plant metabolomics at Bordeaux Metabolome-Fluxome Facility. Tools and applications at PMFB. 4. Journées scientifiques du Réseau Français de Métabolomique et Fluxomique, May 2010, Marseille, France. ⟨hal-02756773⟩
  • Hélène Ferry-Dumazet, Laurent Gil, Catherine Deborde, Annick Moing, Stéphane Bernillon, et al.. Mery-B: a web knowledgebase for the storage, visualization, analysis and annotation of plant metabolomics profiles obtained by NMR. 4. Journées scientifiques du Réseau Français de Métabolomique et Fluxomique, May 2010, Marseille, France. ⟨hal-02756823⟩
  • Catherine Deborde, Stéphane Bernillon, Mickael Maucourt, Cécile Cabasson, Patricia Ballias, et al.. Applications and tools in plant metabolomics at Bordeaux Metabolome-Fluxome Facility. Metabolomics 2010, Jun 2010, Amsterdam, Netherlands. ⟨hal-02757642⟩
  • Nathalie Ollat, Stephane Decroocq, Louis Bordenave, Ghislaine Hilbert, Cyril Hevin, et al.. Phenotypic variability among wild Vitis species: a tool to study some mechanisms underlying berry development and composition. 2. Rencontres Annuelles de l'ISVV, Institut des Sciences de la Vigne et du Vin (ISVV). FRA., Jul 2010, Villenave d'Ornon, France. ⟨hal-02817846⟩
  • Elisabeth Dirlewanger, Gaëlle Cardinet, Christel Renaud, Loick Le Dantec, Catherine Deborde, et al.. Candidate gene mapping and QTL analysis involved in agronomical and fruit quality traits in Prunus species in the European integrated project ISAFRUIT. International Plant & Animal Genomes Conference, Jan 2010, San Diego, United States. ⟨hal-02755616⟩
  • Lisa Boureau, Alexandre How Kit, Linda Stammitti, Annick Moing, Mickael Maucourt, et al.. Functional analysis of SIEZ2, a tomato Enhancer of Zeste protein. FESPB Congress 2010, Jul 2010, Valence, Spain. ⟨hal-02753749⟩
  • Annick Moing, Asaph Aharoni, Benoit Biais, Ilana Rogachev, Sagit Meir, et al.. NMR profiling and more for the characterization of melon genetic resources and melon fruit physiology. 4. Journées Scientifiques du Réseau Français de Métabolomique et Fluxomique, May 2010, Marseille, France. ⟨hal-02754338⟩
  • Catherine Deborde. The French Metabolomics and Fluxomics network (RFMF Réseau Français de Métabolomique et Fluxomique). Metabolomics 2010, Jun 2010, Amsterdam, Netherlands. ⟨hal-02752618⟩
  • Juan Valverde, Padraig Mcloughlin, Kim Reilly, Michael Gaffney, Catherine Deborde, et al.. 500 MHz-1H NMR profiling for quality assessment of broccoli florets. 4. Journées scientifiques du Réseau Français de Métabolomique et Fluxomique, May 2010, Marseille, France. ⟨hal-02751556⟩
  • Stéphane Bernillon, Lisa Boureau, Mickael Maucourt, Catherine Deborde, Anne Bertrand, et al.. Down regulating an epigenetic-related protein, SIEZ2, in tomato induces metabolome modifications. Metabolomics 2010, Jun 2010, Amsterdam, Netherlands. ⟨hal-02752418⟩
  • Stéphane Bernillon, Lisa Boureau, Mickael Maucourt, Catherine Deborde, Anne Bertrand, et al.. Metabolomics unveils metabolic changes in tomato transformants downregulating an epigenetic-related protein SIEZ2. 4. Journées scientifiques du Réseau Français de Métabolomique et Fluxomique, May 2010, Marseille, France. ⟨hal-02757445⟩
  • L. Dondini, M. Adami, Stefano Tartarini, Daniele Bassi, David Ruiz, et al.. Use of different methodological approaches to study sugar contents in stonefruits. 28. International Horticultural Congress, Aug 2010, Lisboa, Portugal. ⟨hal-02755618⟩
  • Alice André, Stéphane Bernillon, Nevile Maher, Denis Thiery, Witold Nowik, et al.. Analysis of Daphne gnidium L. extracts behaviourally active for grape pest insect using NMR and LC-MS. Metabomeeting 2009, Jul 2009, Norwich, United Kingdom. ⟨hal-02757318⟩
  • Annick Moing, Fabien Mounet, Catherine Deborde, Mickael Maucourt, Johann Petit, et al.. Gene and metabolite regulatory network analyses in tomato fruit. Metabomeeting 2009, Jul 2009, Norwich, United Kingdom. ⟨hal-02754208⟩
  • Daniel Jacob, Hélène Ferry-Dumazet, Laurent Gil, Catherine Deborde, Stéphane Bernillon, et al.. Mery-B : management and analysis of plant metabolomics 1H-NMR profiles. Metabomeeting 2009, Jul 2009, Norwich, United Kingdom. ⟨hal-02751144⟩
  • Catherine Deborde, Hélène Ferry-Dumazet, Cécile Cabasson, Mickael Maucourt, Laurent Gil, et al.. Mery-B : Base de Données Métabolomiques dédiée au végétal et outils d’intégration, de visualisation et de traitement statistique de profils RMN 1H. 2. Journée scientifique du réseau RMN aquitain, Apr 2009, Bordeaux, France. ⟨hal-02752654⟩
  • Stéphane Bernillon, Catherine Deborde, Mickael Maucourt, Benoit Biais, Karine Pardon, et al.. Tools and applications in plant metabolomics at Bordeaux metabolome-fluxome facility (PMFB). Metabomeeting 2009, Jul 2009, Norwich, United Kingdom. ⟨hal-02753447⟩
  • William Allwood, Benoit Biais, Catherine Deborde, Yun Xu, Mickael Maucourt, et al.. Direct correlation of 1H-NMR and GC-EI-TOF-MS profiling data reveals significant spatial localisations and metabolite gradients in Charentais melon fr. Metabomeeting 2009, Jul 2009, Norwich, United Kingdom. ⟨hal-02755485⟩
  • Elisabeth Dirlewanger, Karima Boudehri, Christel Renaud, Camille Croset, Loick Le Dantec, et al.. Peach fruit quality : candidate genes or map-based cloning strategy ?. 7. International Peach Symposium, Jun 2009, Lleida, Spain. 1 p. ⟨hal-02822786⟩
  • Benoit Biais, Catherine Deborde, Mickael Maucourt, Cécile Cabasson, Y. Tadmor, et al.. Metabolic profiling techniques to assess and manage fruit quality. SMASH Meeting, Sep 2009, Chamonix, France. ⟨hal-02751149⟩
  • Benoit Biais, Catherine Deborde, Mickael Maucourt, Stéphane Bernillon, Cécile Cabasson, et al.. NMR profiling for the characterisation of melon commercial varieties and genetic resources. Metabomeeting 2009, Jul 2009, Norwich, United Kingdom. ⟨hal-02753178⟩
  • Cécile Cabasson, Martine Dieuaide Noubhani, Y. Ben Akal-Ben Fatma, Mickael Maucourt, Catherine Deborde, et al.. Fruit metabolome changes of antisens transformants of fruit specific phosphenolpyruvate carboxylase (S1-ppc2) under various environmental conditions. 8. Colloque national de la SFBV, Jul 2009, Strasbourg, France. ⟨hal-02754892⟩
  • Catherine Deborde, Annick Moing, C. Junot. French metabolomics and fluxomics network. International metabolomics workshop, Jan 2009, Cambridge, United Kingdom. ⟨hal-02757375⟩
  • Karine Pardon, Stéphane Bernillon, Catherine Deborde, Dominique Rolin, Annick Moing. Hydrophilic Interaction Liquid Chromatography – Mass Spectrometry method development for analysis of tomato leaf. 18. International Mass Spectrometry Conference, Aug 2009, Bremen, Germany. ⟨hal-02755840⟩
  • Mickael Maucourt, Catherine Deborde, Séverine Keller, M. Spraul, Benoit Biais, et al.. 600 MHz-1H NMR profiling for quality assessment of greenhouse-grown tomato fruit. 3. Journées scientifiques RFMF, Feb 2008, Bordeaux, France. ⟨hal-02758234⟩
  • Annick Moing, Fabien Mounet, Catherine Deborde, Mickael Maucourt, Johann Petit, et al.. Plant Metabolomics at Bordeaux: practical implication on tomato. 5. International conference, Jul 2008, Yokohama, Japan. ⟨hal-02753465⟩
  • Fabien Mounet, Annick Moing, Johann Petit, Mickael Maucourt, Virginie Garcia, et al.. Integration of cytological, metabolome and transcriptome data in relation with the acquisition of the fleshy trait in tomato pericarp and locular tissue. 3. Journées scientifiques, Feb 2008, Bordeaux, France. ⟨hal-02755787⟩
  • Yosra Ben Akal, Ethel Mendocilla Sato, Gwenaelle Spieldenner, Raphael Henry, Catherine Deborde, et al.. Profils et empreintes métaboliques par RMN du proton pour évaluer les modifications attendues et inattendues de la composition de tomates transgéniques. 3.Journées Scientifiques, Feb 2008, Bordeaux, France. ⟨hal-02752709⟩
  • Benoit Biais, Catherine Deborde, Mickael Maucourt, Bertrand Beauvoit, William Allwood, et al.. Utilisation de profils métaboliques obtenus par RMN-1H pour la localisation spatiale de métabolites primaires dans le melon charentais. 3. journées, Feb 2008, Bordeaux, France. ⟨hal-02754209⟩
  • Yosra Ben Akal, Ethel Mendocilla Sato, Gwenaelle Spieldenner, Raphael Henri, Catherine Deborde, et al.. Profils et empreintes métaboliques par RMN du proton pour évaluer les modifications attendues et inattendues de la composition de tomates transgéniques. 3. Journées, Feb 2008, Bordeaux, France. ⟨hal-02756617⟩
  • H. Hediji, Cécile Cabasson, Philippe Gallusci, W. Djebali, Mickael Maucourt, et al.. Analyse du profil métabolique chez des plants de tomate en réponse au stress cadmique. 3. Journées scientifiques RFMF, Feb 2008, Bordeaux, France. ⟨hal-02755981⟩
  • Stéphane Bernillon, Ethel Mendocilla Sato, Cécile Cabasson, Yosra Ben Akal, Mickael Maucourt, et al.. 1H NMR and LC-MS metabolomic analysis of tomato leaf. Metabomeeting 2008, Apr 2008, Lyon, France. ⟨hal-02756215⟩
  • Jean Marc Audergon, David Ruiz, Alexandre Bachellez, Alain Blanc, Marie Noëlle Corre, et al.. Study of the genetic basis of Prunus fruit quality on two apricot and two peach populations. 14. International Symposium, Jun 2008, Matera, Italy. ⟨hal-02757590⟩
  • Jean Marc Audergon, Alexandre Bachellez, Alain Blanc, Marielle Boge, K. Boudheri, et al.. ISAFRUIT IP project. Genetic and molecular bases of peach and apricot fruit quality. 14. International Symposium, Jun 2008, Matera, Italy. ⟨hal-02755679⟩
  • Elisabeth Dirlewanger, G. Cardinet, Karima Boudehri, Christel Renaud, Sarah Monllor, et al.. Detection of QTLs controlling major fruit quality components in peach within the European project ISAFRUIT. 12. Eucarpia Symposium on Fruit Breeding and Genetics, Sep 2007, Zaragoza, Spain. ⟨hal-02756986⟩
  • Elisabeth Dirlewanger, Gaëlle Cardinet, Karima Boudehri, Christel Renaud, Sarah Monllor, et al.. Detection of QTLs controlling major fruit quality components in peach within the european project ISAfruit. 12. Eucarpia Symposium on Fruit Breeding and Genetics, Sep 2007, Zaragoza, Spain. ⟨hal-02752788⟩
  • Mickael Maucourt, Catherine Deborde, Benoit Biais, Stéphane Bernillon, Pierre Baldet, et al.. NMR profiling for quality assessment of greenhouse-grown tomato fruit. 3. Annual international conference, Jun 2007, Manchester, United Kingdom. ⟨hal-02756754⟩
  • Stéphane Bernillon, Fabien Mounet, Gwenaëlle Le Gall, Mickael Maucourt, Catherine Deborde, et al.. LC-MS metabolomic profiling of mesocarp tissue during tomato fruit development: comparison of different data pre-processing methods and analyses. 3. Annual international conference, Jun 2007, Manchester, United Kingdom. ⟨hal-02756030⟩
  • Fabien Mounet, Annick Moing, Johann Petit, Mickael Maucourt, Virginie Garcia, et al.. Cell expansion in tomato mesocarp and locular tissues: integration of transcriptome and metabolome data. 3. Annual international conference, Jun 2007, Manchester, United Kingdom. ⟨hal-02754523⟩
  • Ethel Mendocilla Sato, Stéphane Bernillon, Cécile Cabasson, Yosra Ben Akal-Ben Fatma, Hédia Hédiji, et al.. 1H-NMR metabolomic analysis of tomato leaf. 3. Annual international conference, Jun 2007, Manchester, United Kingdom. ⟨hal-02756940⟩
  • Magalie Cossegal, Catherine Deborde, Mickael Maucourt, Pascual Perez, Peter Rogowsky, et al.. NMR metabolomic analysis of maize kernels: characterization of a novel allele of Brittle2. Metabolomics Society's 3rd annual international conference, Metabolomics Society, Jun 2007, Manchester, United Kingdom. ⟨hal-02753743⟩
  • Jean Marc Audergon, David Ruiz, Alexandre Bachellez, Alain Blanc, Marie Noëlle Corre, et al.. ISAFRUIT. Study of the genetic basis of Prunus fruit quality in two peach and two apricot populations. 12. Eucarpia Symposium on Fruit Breeding and Genetics, Sep 2007, Zaragoza, Spain. ⟨hal-02755617⟩
  • Jean Marc Audergon, Alexandre Bachellez, Alain Blanc, Marielle Boge, Karima Boudehri, et al.. ISAfruit ip project - genetic and molecular bases of peach and apricot fruit quality. 12. Eucarpia Symposium on Fruit Breeding and Genetics, Sep 2007, Zaragoza, Spain. ⟨hal-02757537⟩
  • Fabien Mounet, Martine Lemaire, Mickael Maucourt, Cécile Cabasson, J.L. Giraudel, et al.. 1H-NMR metabolic profiling reveals tissue specificity in tomato fruit. 4. International conference, Apr 2006, Reading, United Kingdom. ⟨hal-02757194⟩
  • Stéphane Bernillon, Fabien Mounet, Gwenaëlle Le Gall, Mickael Maucourt, Catherine Deborde, et al.. Metabolomic profiling of two tissues during tomato (Solanum lycopersicum) fruit development: cross-validation of LC, LC/MS and NMR approaches. 2. Journées, Dec 2006, Saint Sauves d'Auvergne, France. ⟨hal-02753431⟩
  • Annick Moing, Graham Noctor, Catherine Deborde, Mickael Maucourt, Christel Renaud, et al.. MétaboP: a French initiative supported by Génoplante for the development of analytical and bioinformatic tools for plant metabolomics. 4. International conference, Apr 2006, Reading, United Kingdom. ⟨hal-02754317⟩
  • H. Ferry-Dumazet, A. Barre, D. Jacob, A. de Daruvar, Annick Moing, et al.. Bioinformatics resources for the study of plant metabolomics. 4. International conference, Apr 2006, Reading, United Kingdom. ⟨hal-02754398⟩
  • Catherine Deborde, Stéphane Bernillon, Cécile Cabasson, Mickael Maucourt, Christel Renaud, et al.. The Metabolome pole of the Functional Genomics Platform of Bordeaux. 2. Journées, Dec 2006, Saint Sauves d'Auvergne, France. ⟨hal-02753989⟩
  • Catherine Deborde, Mickael Maucourt, Christel Renaud, Monique Gaudillère, Cécile Cabasson, et al.. Metabolome-Fluxome facility at the Plant Systems Biology Institute in Bordeaux, France. 4. International conference, Apr 2006, Reading, United Kingdom. ⟨hal-02754805⟩
  • Anne Cazor, Catherine Deborde, Annick Moing, Dominique Rolin, Herve This. “Carrots stocks” composition by H-NMR analysis. 8. International conference, Jul 2006, Nottingham, United Kingdom. ⟨hal-01627199⟩
  • Anne Cazor, Catherine Deborde, Annick Moing, Dominique Rolin, Herve This. Mechanisms of Sugar Extraction from Carrot Roots (Daucus carota L.) studied by direct NMR measurements: comparison of aqueous solutions obtained through thermal processing and model solutions. 13. World congress of food science and technology, Sep 2006, Nantes, France. ⟨hal-01627198⟩
  • Fabien Mounet, Annick Moing, Johann Petit, Mickael Maucourt, Virginie Garcia, et al.. Contribution of tomato fruit tissues to the acquisition of the fleshy trait. 15. FESPB Congress, Jul 2006, Lyon, France. ⟨hal-02751528⟩
  • Jean-Luc Poessel, Annick Moing, Jean Marc Audergon, Alexandre Bachellez, Alain Blanc, et al.. Profils métaboliques de la pêche et de l’abricot pour l’étude des bases génétiques de la qualité des fruits de Prunus dans le projet européen Isafruit. 2. Journées Scientifiques du Réseau Français de Métabolomique et Fluxomique, Dec 2006, Saint Sauves d'Auvergne, France. ⟨hal-02757967⟩
  • Jean-Luc Poessel, Marie-Helene Sauge-Collet, Marie Noëlle Corre, Christel Renaud, Monique Gaudillère, et al.. Metabolic profiling of shoot apices infested by the peach-potato aphid in susceptible and resistant peach cultivars. Proceedings from the 4th International Plant Metabolomics Conference, Apr 2006, Berkshire, United Kingdom. ⟨hal-02820634⟩
  • Annick Moing, Catherine Deborde, Fabien Mounet, Martine Lemaire-Chamley, Cécile Cabasson, et al.. Profils quantitatifs et empreintes métaboliques par RMN pour étudier la qualité des fruits. Premières journées scientifiques, Dec 2005, Toulouse, France. ⟨hal-02759652⟩
  • Fabien Mounet, Martine Lemaire-Chamley, Mickael Maucourt, Catherine Deborde, Christophe Rothan, et al.. Tissular specificity of metabolic profiles during tomato fruit development. 6. Colloque national de la SFBV, Apr 2005, Arcachon, France. ⟨hal-02762787⟩
  • Fabien Mounet, Martine Lemaire-Chamley, Mickael Maucourt, Catherine Deborde, Christophe Rothan, et al.. Metabolic profiling of fruit tissues during tomato development. Premières journées scientifiques, Dec 2005, Toulouse, France. ⟨hal-02763722⟩
  • Hélène Ferry-Dumazet, Daniel Jacob, Aurélien Barré, Cécile Cabasson, Christel Renaud, et al.. Un outil informatique générique pour le stockage et le data-mining de données de métabolome de plantes. Premières journées scientifiques, Dec 2005, Toulouse, France. ⟨hal-02759485⟩
  • Catherine Deborde, G. Fourloubey, Daniel Jacob, Fabien Mounet, Cécile Cabasson, et al.. Chemical fingerprinting for the evaluation of polar and non polar metabolite changes during fruit development in tomato (Solanum lycopersicum) by means of H NMR. 6. Colloque national de la SFBV, Apr 2005, Arcachon, France. ⟨hal-02762461⟩
  • Catherine Deborde, Cécile Cabasson, Mickael Maucourt, Christel Renaud, Monique Gaudillère, et al.. Pôle Métabolome à l'IFR 103 Biologie Végétale Intégrative de Bordeaux. Premières journées scientifiques, Dec 2005, Toulouse, France. ⟨hal-02764501⟩
  • Jean-Luc Poessel, Marie-Hélène Sauge, Marie Noëlle Corre, Catherine Deborde, Claire Dufour, et al.. Effets de l'infestation sur le profil métabolique d'apex de variétés de pêcher sensibles et résistantes au puceron vert. 1. Réseau français de métabolomique et fluxomique, Dec 2005, Toulouse, France. 1 p. ⟨hal-02833593⟩
  • Giuliano E. Pereira, Ghislaine Hilbert, Jean-Pierre Gaudillere, Jean-Pierre Soyer, Cornelis van Leeuwen, et al.. 1H NMR metabolic fingerprints of grape berries produced in different plots in Bordeaux, France. 7. International Symposium on Grapevine Physiology and Biotechnology, Jun 2004, Davis, CA, United States. ⟨hal-02763419⟩
  • Annick Moing, M. Dieuaide-Noubhani, Catherine Deborde, P. Raymond, M. Maucourt, et al.. Regulation of carbon metabolism in fruit through metabolomics and fluxomics. France Israël Agro-Biotechnologies Workshop, Dec 2004, Auzeville, France. ⟨hal-02761369⟩
  • G. Meurice, Arnaud Bondon, Catherine Deborde, Patrick Boyaval. Determination of metabolic fluxes during glucose catabolism in propionibacterium freudenreichii subsp. shermanii. 15. forum for applied biotechnology, Sep 2001, Gent, Belgium. ⟨hal-02762111⟩
  • G. Gouesbet, Gwénaël Jan¨, Catherine Deborde, Patrick Boyaval. Lactobacillus delbruecki subsp. bulgaricus and heat stress. 13. Forum for applied biotechnology, Sep 1999, Het Pand Gent, Belgium. ⟨hal-02768470⟩
  • Patrick Boyaval, Catherine Deborde, C. Corre, C. Blanco, E. Bégué. Stress and osmoprotection in propionibacteria (trehalose, glycine-betaine). 2. Congrès international sur les Propionibactéries, Jun 1998, Cork, Ireland. ⟨hal-02842106⟩

Poster communications63 documents

  • Daniel Jacob, Catherine Deborde, Annick Moing. NMRProcFLOW: A graphical and interactive tool dedicated to 1D spectra processing for plant NMR metabolomics. International Plant Spectroscopy Conference (IPSC), Mar 2019, Berlin, Germany. 2019. ⟨hal-02556875⟩
  • Constance Musseau, Stéphane Bernillon, Catherine Deborde, Daniel Jacob, Joana Jorly, et al.. LC-MS and NMR metabolomics study of a tomato (Solanum lycopersicum L.) mutant affected in the fruit pericarp development. 12. Journées Scientifiques du RFMF, May 2019, Clermont-Ferrand, France. pp.128/P48, 2019, 12. Journées Scientifiques du RFMF. ⟨hal-02556782⟩
  • Rita Wedeking, Mickael Maucourt, Catherine Deborde, Annick Moing, Yves Gibon, et al.. NMR metabolomic profiling reveals a distinct metabolic recovery response in shoots and roots of temporarily drought-stressed sugar beets. International Plant Spectroscopy Conference (IPSC), Mar 2019, Berlin, Germany. 2019. ⟨hal-02556922⟩
  • Simon Roques, Catherine Deborde, Nadège Richard, Sandrine Skiba-Cassy, Annick Moing, et al.. Apport de la métabolomique par 1H-RMN pour le développement de nouveaux aliments chez la truite arc en ciel. 6. Journées de la Recherche Filière Piscicole, Jul 2019, Paris, France. 2019, 6èmes Journées de la Recherche Filière Piscicole. ⟨hal-02179541⟩
  • Stéphane Bernillon, Cecile Cabasson, Cédric Cassan, Grégory da Costa, Catherine Deborde, et al.. MetaboHUB-Bordeaux. Journées Scientifiques INRA-BAP, Sep 2019, Hyères, France. 2019, ⟨10.15454/1.5572412770331912E12⟩. ⟨hal-02570809⟩
  • Stéphane Bernillon, Mickael Maucourt, Sylvain Chereau, Catherine Deborde, Daniel Jacob, et al.. Characterization of GMO or glyphosate effects on the composition of maize grain and maize-based diet for rat feeding. 12. Journées Scientifiques du RFMF, May 2019, Clermont-Ferrand, France. pp.109 /P30, 2019, 12. Journées Scientifiques du RFMF. ⟨hal-02556668⟩
  • Simon Roques, Catherine Deborde, Nadège Richard, Sandrine Skiba-Cassy, Annick Moing, et al.. Metabolomic application in fish nutrition: profiling novel aquaculture feeds and assessing their impact on rainbow trout plasma. EUROMAR - European Magnetic Resonance Meeting, Jul 2018, Nantes, France. 2018. ⟨hal-02161578⟩
  • Catherine Deborde, Blandine Madji Hounoum, Daniel Jacob, Mickael Maucourt, Simon Roques, et al.. NMR-based metabolomics workflow for characterization and effect assessment of alternative plant-based diets on plasma and microbiote in rainbow trout. EUROMAR - European Magnetic Resonance Meeting, Jul 2018, Nantes, France. 2018. ⟨hal-02160639⟩
  • Léa Roch, Coffi Belmys Cakpo, Catherine Deborde, Mickael Maucourt, Thierry Berton, et al.. Primary metabolism investigation of fleshy fruit species using 1H-NMR profiling. EUROMAR - European Magnetic Resonance Meeting, Jul 2018, Nantes, France. 2018. ⟨hal-02737961⟩
  • Léa Roch, Coffi Belmys Cakpo, Catherine Deborde, Mickael Maucourt, Thierry Berton, et al.. Primary metabolism investigation of fleshy fruit species using 1H-NMR profiling. -, Jul 2018, Nantes, France. pp.546, 2018. ⟨hal-02539684⟩
  • Daniel Jacob, Catherine Deborde, Marie Lefebvre, Mickael Maucourt, Annick Moing. NMRProcFlow: A graphical and interactive tool dedicated to 1D spectra processing for NMR-based metabolomics.. EUROMAR - European Magnetic Resonance Meeting, Jul 2018, Nantes, France. 2018. ⟨hal-02733608⟩
  • Daniel Jacob, Catherine Deborde, Marie Lefebvre, Mickaël Maucourt, Annick Moing. NMRProcFlow: An easy GUI tool dedicated to 1D NMR spectra processing (1H & 13C) for Metabolomics. 11. Journées Scientifiques du RFMF, May 2018, Liège, Belgium. pp.P24, 2018, 11. Journées Scientifiques du RFMF. ⟨hal-03125691⟩
  • Maria Urrutia, Melisande Blein-Nicolas, Stéphane Bernillon, Catherine Deborde, Mickaël Maucourt, et al.. Combined metabolomic and proteomic profiling of maize leaf to reveal metabolic responses to cold temperatures. 11. Journées Scientifiques du RFMF, May 2018, Liège, Belgium. pp.P25, 2018, 11. Journées Scientifiques du RFMF. ⟨hal-03125712⟩
  • Catherine Deborde, Roland Molinié, Jean-Xavier Fontaine, Adolfo Botana, François Mesnard, et al.. Inter laboratory comparison of a revisited protocol for 1D 1H-NMR profiling of plant samples from extract preparation to spectra processing. EUROMAR - European Magnetic Resonance Meeting, Jul 2018, Nantes, France. 2018. ⟨hal-02737299⟩
  • Simon Roques, Catherine Deborde, Nadège Richard, Sandrine Skiba-Cassy, Annick Moing, et al.. Integrative 1H-NMR metabolomic investigation of the effect of alternative diets on rainbow trout plasma. 18. ISFNF International Symposium on Fish Nutrition and Feeding "40 years of research in fish nutrition", Jun 2018, Las Palmas de Gran Canaria, Spain. 2018, Libro de abstracts. ⟨hal-01831458⟩
  • Jean-Xavier Fontaine, Roland Molinié, Catherine Deborde, Adolfo Botana, Francois Mesnard, et al.. Precautions of a revisited protocol for 1D 1H-NMR profiling of plant samples from extract preparation to spectra processing. Preliminary results of an inter laboratory experiments.. 11. Journées Scientifiques du RFMF, May 2018, Liège, Belgium. pp.P34, 2018, 11. Journées Scientifiques du RFMF. ⟨hal-03125729⟩
  • Simon Roques, Catherine Deborde, Annick Moing, N. Richard, Y. Marchand, et al.. Evaluation of alternative diets for farmed rainbow trout (Oncorhynchus mykiss) by H-NMR metabolomics. Aquaculture Europe 2017, Oct 2017, Dubrovnik, Croatia. 2017. ⟨hal-01901341⟩
  • Catherine Deborde, Patricia Ballias, Camille Bénard, Stéphane Bernillon, Thierry Berton, et al.. Plant Metabolomics at Bordeaux Metabolome Facility, a member of MetaboHUB and PHENOME IA projects. Tools and Applications. Metabolomics 2016. 12. Annual Conference of the Metabolomics Society, Jun 2016, Dublin, United Kingdom. 2016. ⟨hal-02741696⟩
  • Marie Lefebvre, Mickael Maucourt, Annick Moing, Dominique Rolin, Daniel Jacob, et al.. EMERODE: nuclEAR MagnEtic Resonance prOfiles DatabasE. 10. journées scientifiques du Réseau Francophone de Métabolomique et Fluxomique RFMF 2016, May 2016, Montpellier, France. 2016. ⟨hal-02741930⟩
  • Isma Belouah, Thierry Balliau, Camille Benard, Bertrand Beauvoit, Sophie Colombie, et al.. The timing of shifts in the transcriptome and proteome in relation to metabolic state during tomato fruit development. Metabolomics 2016. 12. Annual Conference of the Metabolomics Society, Jun 2016, Dublin, Ireland. 2016. ⟨hal-01603579⟩
  • Angela Machado Vieira, Stéphanie Cluzet, Catherine Deborde, Ghislaine Hilbert, Annick Moing, et al.. Characterization of a plant cell suspension culture of Vitis vinifera: biomass composition assessment before C13-metabolic flux analysis. 10. journées scientifiques du Réseau Francophone de Métabolomique et Fluxomique RFMF 2016, May 2016, Montpellier, France. 2016. ⟨hal-02741756⟩
  • Thierry Berton, Stéphane Bernillon, Mickael Maucourt, Catherine Deborde, Natalia Falagan Sama, et al.. Metabolomic study of tolerance to water limitation for sunflower germination. Metabolomics 2016. 12. Annual Conference of the Metabolomics Society, Jun 2016, dublin, Ireland. 2016. ⟨hal-01605791⟩
  • Catherine Deborde, Patricia Ballias, Camille Bénard, Stéphane Bernillon, Thierry Berton, et al.. Plant Metabolomics at Bordeaux Metabolome Facility, a member of MetaboHUB and PHENOME IA projects. Tools and Applications. 10. journées scientifiques du Réseau Francophone de Métabolomique et Fluxomique RFMF 2016, May 2016, Montpellier, France. 2016. ⟨hal-02743906⟩
  • Catherine Deborde, Mickael Maucourt, Simon Roques, Dominique Rolin, Annick Moing, et al.. Preliminary results of the first NMR ring test inside MetaboHUB IA project on NMR acquisition and annotation of the NIST standard reference material of human plasma (SRM1950). 10. journées scientifiques du Réseau Francophone de Métabolomique et Fluxomique RFMF 2016, May 2016, Montpellier, France. 2016. ⟨hal-01886393⟩
  • Annick Moing, Maria Urrutia, Olivier Fernandez, Vanessa Zhendre, Nadia Lamari, et al.. Searching for marker metabolites of crop performance. Metabolomics 2016. 12. Annual Conference of the Metabolomics Society, Jun 2016, Dublin, United Kingdom. 2016. ⟨hal-02744241⟩
  • Annick Moing, Catherine Deborde, Patricia Ballias, Camille Bénard, Stéphane Bernillon, et al.. Plant Metabolomics at Bordeaux Metabolome Facility, a member of MetaboHUB and PHENOME IA projects. Tools and Applications.. 9. Journées scientifiques du RFMF, Jun 2015, Lille, France. 2015. ⟨hal-02743630⟩
  • Léa Roch, Stéphane Bernillon, Mickael Maucourt, Catherine Deborde, Camille Bénard, et al.. Combining MS and NMR metabolomic profiling during tomato fruit development to study environment effect on metabolism. 9. Journées scientifiques du RFMF, Jun 2015, Lille, France. 2015. ⟨hal-02739251⟩
  • Fatima Adra, Gilles Vercambre, Daniel Plénet, Benedicte Jamin Bakan, Agathe Noblet, et al.. Consequences of high temperatures and drought on peach fruit production strongly depends on their period of occurence. ISHS International Symposium, INNOHORT, Jun 2015, Avignon, France. 2015, Innovation in Integrated & Organic Horticulture. ⟨hal-01608225⟩
  • Nadia Lamari, Vanessa Zhendre, Stéphane Bernillon, Mickael Maucourt, Catherine Deborde, et al.. Cold treatment affects the metabolite profiles of maize leaves. 9. Journées scientifiques du RFMF, Jun 2015, Lille, France. 2015. ⟨hal-02742488⟩
  • Valentin Joubert, Blandine Madji Hounoum, Catherine Deborde, Mickael Maucourt, Annick Moing, et al.. Evaluation des conséquences métaboliques de deux régimes alimentaires sur la composition d’extraits lipidiques de foie et de muscle de truite arc-en-ciel par une approche de RMN métabolomique. 9. Journées scientifiques du RFMF, Jun 2015, Lille, France. 2015. ⟨hal-01901419⟩
  • Catherine Deborde, . Conseil d'Administration Du Rfmf, . Conseil d'Administration Du Rfmf Junior. Le Réseau Français de Métabolomique et Fluxomique. 9. Journées scientifiques du RFMF, Jun 2015, Lille, France. 2015. ⟨hal-02739342⟩
  • Léa Roch, Stéphane Bernillon, Mickael Maucourt, Catherine Deborde, Camille Benard, et al.. Combining MS and proton NMR metabolomic profiling during tomato fruit development to study environment effect on metabolism. 12. Solanaceae Conference SOL 2015, Oct 2015, Bordeaux, France. 2015, SOL 2015 - Book of abstracts. ⟨hal-01606414⟩
  • Marie Lefebvre, Julie Pinelli, Nils Paulhe, Vanessa Zhendre, Claire Lopez, et al.. Vers une annotation RMN 1D et 2D ciblée à partir de matrices de référence. 9. Journées scientifiques du RFMF, Jun 2015, Lille, France. 2015. ⟨hal-02743576⟩
  • Mickael Maucourt, Camille Bénard, Benoit Biais, Patricia Ballias, Catherine Deborde, et al.. Combining metabolite and enzymatic profiling during tomato fruit development. 8. Journées Scientifiques du Réseau Français de Métabolomique et Fluxomique RFMF, May 2014, Lyon, France. 1 p., 2014. ⟨hal-02793996⟩
  • Nadia Lamari, Daniel Jacob, Catherine Deborde, Annick Moing, Stéphane Bernillon. Construction and application of reference MS spectral database for metabolite profiling and matrix annotation of plant organisms. 8. Journées Scientifiques du Réseau Français de Métabolomique et Fluxomique RFMF, May 2014, Lyon, France. 1 p., 2014. ⟨hal-02798309⟩
  • Honorine Willeman, Annick Moing, Mickael Maucourt, Stéphane Bernillon, Catherine Deborde, et al.. Effet de la variété et de la torréfaction sur la composition du produit torréfié de la racine de chicorée industrielle (Cichorium intybus var. sativum). 8. Journées Scientifiques du Réseau Français de Métabolomique et Fluxomique RFMF, May 2014, Lyon, France. 1 p., 2014. ⟨hal-02801296⟩
  • Reza M. Salek, Kenneth Haug, Pablo Conesa, Mark Williams, Steffen Neumann, et al.. MetaboLights: Metabolomics data repository and the role of COSMOS. 8. Journées Scientifiques du Réseau Français de Métabolomique et Fluxomique RFMF, May 2014, Lyon, France. 1 p., 2014. ⟨hal-02800369⟩
  • Daniel Schober, Michael Wilson, Daniel Jacob, Annick Moing, Catherine Deborde, et al.. nmrML: an XML-based open standard for NMR data storage and exchange. Metabolomics 2014 - 10. Annual Conference of the Metabolomics Society, Jun 2014, Tsuruoka, Japan. 2014. ⟨hal-02799345⟩
  • Annick Moing, Catherine Deborde, Patricia Ballias, Camille Bénard, Stéphane Bernillon, et al.. Plant Metabolomics at Bordeaux Metabolome Facility, a member of MetaboHUB IA project. Tools and Applications. 8. Journées Scientifiques du Réseau Français de Métabolomique et Fluxomique RFMF, May 2014, Lyon, France. 1 p., 2014. ⟨hal-02799366⟩
  • Tangi Jézéquel, Catherine Deborde, Mickael Maucourt, Vanessa Zhendre, Annick Moing, et al.. La RMN 2D Ultrarapide appliquée à l’identification et la quantification de métabolites d’extraits de fruits de tomate au cours d’une cinétique développementale. 8. Journées Scientifiques du Réseau Français de Métabolomique et Fluxomique RFMF, May 2014, Lyon, France. 1 p., 2014. ⟨hal-02800325⟩
  • Vanessa Zhendre, Mickael Maucourt, Daniel Jacob, Annick Moing, Dominique Rolin, et al.. Bibliothèques de spectres de RMN 1D et 2D de composés de référence pour la métabolomique végétale. 8. Journées Scientifiques du Réseau Français de Métabolomique et Fluxomique RFMF, May 2014, Lyon, France. 1 p., 2014. ⟨hal-02791990⟩
  • Daniel Jacob, Catherine Deborde, Annick Moing. ERVA method for 1H-NMR metabolomics data: a novel binning strategy highlighting chemical information. Metabolomics 2013, Jul 2013, Glasgow, United Kingdom. 1 p., 2013. ⟨hal-02805243⟩
  • Stéphane Bernillon, Benoit Biais, Catherine Deborde, Laetitia Fouillen, Yvon Guntz, et al.. On-going method developments in Bordeaux Metabolome Facility. Metabolomics 2013 - 9. Annual conference of the Metabolomics Society, Jun 2013, Glasgow, United Kingdom. 2013. ⟨hal-02804388⟩
  • A. Rasori, Mickael Maucourt, Stéphane Bernillon, Catherine Deborde, Annick Moing, et al.. Metabolomic and molecular profiling of a slow ripening peach selection reveals new mechanisms controlling mesocarp development. 8. International Peach Symposium, Jun 2013, Matera, Italy. 2013. ⟨hal-02808355⟩
  • Stéphane Bernillon, Benoit Biais, Catherine Deborde, Laetitia Fouillen, Yvon Guntz, et al.. Coordinated methodological developments for plant metabolomics at Bordeaux. 7. Journées scientifiques du Réseau Français de Métabolomique et de Fluxomique, Jun 2013, Amiens, France. 2013. ⟨hal-02810760⟩
  • Catherine Deborde, Blandine Madji Hounoum, Mickael Maucourt, Annick Moing, Laurence Larroquet, et al.. Combined NMR-based metabolomic analyses in rainbow trout nutrition studies. 9. Annual International Meeting of the Metabolomics Society, Jul 2013, Glasgow, United Kingdom. 2013. ⟨hal-02747807⟩
  • Laurie Legoahec, Vessela Atanasova-Penichon, Nadia Ponts, Catherine Deborde, Mickael Maucourt, et al.. Metabolomics of growth and type B trichothecenes production in Fusarium graminearum. 7. Journées scientifiques du Réseau Français de Métabolomique et Fluxomique, Jun 2013, Amiens, France. 2013. ⟨hal-02804120⟩
  • Camille Benard, Stéphane Bernillon, Sonia Osorio-Algar, Mickael Maucourt, Benoit Biais, et al.. Influence of diurnal factor on compositional changes of tomato fruit and leaf. 7. Journées scientifiques du Réseau Français de Métabolomique et Fluxomique, Jun 2013, Amiens, France. 2013. ⟨hal-02805301⟩
  • Blandine Madji Hounoum, Catherine Deborde, Mickael Maucourt, Annick Moing, Laurence Larroquet, et al.. Evaluation des conséquences métaboliques de deux régimes alimentaires chez la truite arc-en-ciel par une approche métabolimique. 7.Journées Scientifiques du Réseau Français de Métabolomique et Fluxomique, Jun 2013, Amiens, France. 2013. ⟨hal-02747469⟩
  • Annick Moing, Benoit Biais, Mickael Maucourt, Camille Benard, Patricia Ballias, et al.. Compositional changes in fruit pericarp of water-stressed tomato in greenhouse. Metabolomics 2012, Jun 2012, Washington, United States. 1 p., 2012. ⟨hal-02805488⟩
  • Catherine Deborde, Annick Moing, Cécile Cabasson, Stéphane Bernillon, Dominique Rolin, et al.. Mery-B: a plant metabolomics database and knowledge base. Metabolomics 2012, Jun 2012, Washington, United States. 1 p., 2012. ⟨hal-02801976⟩
  • Etienne Legrand, Mickael Maucourt, Catherine Deborde, Bertrand Beauvoit, Daniel Jacob, et al.. Evolution des profils métabolomiques au cours du développement du mésocarpe et de la graine du fruit de palmier à huile. 6. Journées Scientifiques du Réseau Français de Métabolomique et Fluxomique (RFMF), May 2012, Nantes, France. p. 89, 2012. ⟨hal-02811510⟩
  • Jean-Luc Poessel, Marie-Hélène Sauge, Michael Staudt, Claire Dufour, Catherine Deborde, et al.. Metabolite profiling and feeding bioassays suggest a major role for a dicaffeoylquinic acid in induced resistance of peach to Myzus persicae aphid. PRIR 2011 Joint meeting of the "PR-proteins Workshop" and the "Working Group Induced Resistance in Plants Against Insects and Diseases", Sep 2011, Neuchatel, Switzerland. 154 p., 2011, PR-Proteins and Induced Resistance Against Pathogens and Insects. Abstracts book. ⟨hal-02748156⟩
  • Camille Bénard, Benoit Biais, Stéphane Bernillon, Mickael Maucourt, Sonia Osorio-Algar, et al.. Diurnal compositional changes in pericarp of tomato fruit. Metabomeeting 2011, Sep 2011, Helsinki, Finland. 1 p., 2011. ⟨hal-02747463⟩
  • Jean-Luc Poessel, Camille Croset, Marie Noëlle Corre, Elodie Lecerf, Jawad Aarrouf, et al.. Développement de biopesticides d’origine végétale pour l’horticulture : méthodes de production, spectre d’action et validation in vivo de l’efficacité des acides dicaféoylquiniques. ANR - Grand colloque Biologie et Santé 2011, Jul 2011, Lyon, France. 1 p., 2011. ⟨hal-02810470⟩
  • Elisabeth Dirlewanger, Karima Boudehri, Christel Renaud, Mathieu Fouché, Camille Croset, et al.. QTL anlysis of characters involved in fruit quality in Prunus persica and a related species and co-location with candidate genes in the European Project ISAFRUIT. 7. International Peach Symposium, Jun 2009, Lleida, Spain. 2 p., 2009. ⟨hal-02823051⟩
  • Elisabeth Dirlewanger, Karima Boudehri, Gaëlle Cardinet, Christel Renaud, Camille Croset, et al.. QTL analysis of metabolites involved in fruit quality in Prunus species and co-location with candidate genes in the European Project ISAFRUIT - Preliminary results obtained on P. persica related species. 4. International Rosaceae Genomics Conference, Mar 2008, Pucon, Chile. 1 p., 2008. ⟨hal-02821062⟩
  • Jean-Luc Poessel, Camille Croset, Christel Renaud, Bénédicte Quilot, Catherine Deborde, et al.. Profils métaboliques de pêche: une étude des métabolites primaires et secondaires par RMN-1H et HPLC de deux descendances révèle de profondes variations entre génotypes et la présence de composés inattendus.. Réseau français de métabolomique et fluxomique : troisième journée scientifique, Feb 2008, Bordeaux, France. 2 p., 2008. ⟨hal-02821044⟩
  • Patrick Lambert, Bénédicte Quilot, Jean Marc Audergon, Alexandre Bachellez, Alain Blanc, et al.. Study of the genetic basis of Prunus fruit quality in 2 peach and 2 apricot populations. 2. ISAfruit General Assembly, Jun 2007, Bologne, Italy. 1 p., 2007. ⟨hal-02822407⟩
  • Jean-Luc Poëssel, Marie-Hélène Sauge, Marie-Noëlle Corre, Christel Renaud, Monique Gaudillère, et al.. Metabolic profiling of shoot apices infested by the peach-potato aphid in susceptible and resistant peach cultivars. The 4th International Plant Metabolomics Conference, Apr 2006, Reading, United Kingdom. 2006, ⟨10.1007/s11306-006-0035-1⟩. ⟨hal-02400315⟩
  • Jean-Luc Poessel, M.N. Corre, Monique Gaudillère, M.H. Sauge, J.P. Lacroza, et al.. Modification de la teneur en acides aminés des apex de pêcher en réponse à l'infestation par le puceron vert Myzus persicae (Sulzer) : rôle potentiel dans la résistance. Ecole thématique "Réponses des plantes aux facteurs environnementaux abiotiques", Nov 2004, Montpellier, France. 1 p., 2004. ⟨hal-02830266⟩
  • Catherine Deborde, G. Meurice, Patrick Boyaval. In vivo 13C NMR study of glucose metabolism in Propionibacterium freudenreichii subsp. shermanii. 3. International Symposium on propionibacteria, Jul 2001, Zurich, Switzerland. 1 p., 2001. ⟨hal-02831164⟩
  • Catherine Deborde, G. Meurice, Patrick Boyaval. Analyse par 13C RMN in vivo du co-métabolisme aspartate-pyruvate chez Propionibacterium freudenreichii subsp. shermanii. Congrès SFM "De la génomique au gène métabolique", Sep 2000, Paris, France. 1 p., 2000. ⟨hal-02841550⟩

Book sections6 documents

  • Catherine Deborde, Daniel Jacob. MeRy-B, a Metabolomic Database and Knowledge Base for Exploring Plant Primary Metabolism.. Plant Metabolism : Methods and Protocols, 1083, Springer Science+Business Media, 2014, Methods in Molecular Biology, ⟨10.1007/978-1-62703-661-0_1⟩. ⟨hal-02793139⟩
  • Dominique Rolin, Catherine Deborde, Mickael Maucourt, Cécile Cabasson, Florence Fauvelle, et al.. High-resolution 1H-NMR spectroscopy and beyond to explore plant metabolome. Metabolomics Coming of Age with its Technological Diversity, 67 (1ère éd.), Elsevier Ltd, 693 p., 2013, Advances in Botanical Research, 978-0-12-397922-3. ⟨10.1016/B978-0-12-397922-3.00001-0⟩. ⟨hal-02811296⟩
  • Yves Gibon, Dominique Rolin, Catherine Deborde, Stéphane Bernillon, Annick Moing. New opportunities in metabolomics biochemical phenotyping for plant systems biology. Metabolomics, InTech, 2012, 978-953-51-0046-1. ⟨hal-02804473⟩
  • J. William Allwood, Ric C. H. de Vos, Annick Moing, Catherine Deborde, Alexander Erban, et al.. Plant metabolomics and its potential for systems biology research: background concepts, technology, and methodology. Methods in Systems Biology, 500, Elsevier Ltd, 2011, Methods in Enzymology, 978-0-12-385118-5. ⟨10.1016/B978-0-12-385118-5.00016-5⟩. ⟨hal-02811463⟩
  • Annick Moing, Catherine Deborde, Dominique Rolin. Metabolic fingerprinting and profiling by proton NMR. Functional plant genomics, Science Publishers, 2007, 978-1-57808-506-4. ⟨hal-02813653⟩
  • Patrick Boyaval, Catherine Deborde. Metabolic behaviour of lactic and propionic acid bacteria. NMR in microbiology: theory and applications, Horizon Scientific Press, 2000, 1-898486-21-2. ⟨hal-02839365⟩

Preprints, Working Papers, ...2 documents

  • Daniel Jacob, Catherine Deborde, Annick Moing. BioStatFlow -Statistical Analysis Workflow for "Omics" Data. 2020. ⟨hal-02894113⟩
  • Daniel Jacob, Catherine Deborde, Marie Lefebvre, Mickael Maucourt, Anick Moing. NMRProcFlow: A graphical and interactive tool dedicated to 1D spectra processing for NMR-based metabolomics. 2016. ⟨hal-01401241⟩

Theses1 document

  • Catherine Deborde. Etude du métabolisme carboné primaire de bactéries propioniques laitières par résonance magnétique nucléaire in vivo du 13C : Des voies métaboliques aux tests de performance des souches industrielles. Sciences du Vivant [q-bio]. Ecole Nationale Supérieure Agronomique, 1998. Français. ⟨tel-02838770⟩