Arnaud Belcour, Jean Girard, Méziane Aite, Ludovic Delage, Camille Trottier, et al.. Inferring Biochemical Reactions and Metabolite Structures to Understand Metabolic Pathway Drift. iScience, Elsevier, 2020, 23 (2), pp.100849. ⟨10.1016/j.isci.2020.100849⟩. ⟨hal-01943880v2⟩

Bertille Burgunter-Delamare, Hetty Kleinjan, Clémence Frioux, Enora Fremy, Margot Wagner, et al.. Metabolic Complementarity Between a Brown Alga and Associated Cultivable Bacteria Provide Indications of Beneficial Interactions. Frontiers in Marine Science, Frontiers Media, 2020, 7, pp.1-11. ⟨10.3389/fmars.2020.00085⟩. ⟨hal-02866101⟩

Simon M. Dittami, Erwan Corre, Loraine Brillet-Guéguen, Agnieszka P. Lipinska, Noé Pontoizeau, et al.. The genome of Ectocarpus subulatus – A highly stress-tolerant brown alga. Marine Genomics, Elsevier, 2020, pp.1-24. ⟨10.1016/j.margen.2020.100740⟩. ⟨hal-02866117⟩

Richard Fischl, Kresten Bertelsen, Fanny Gaillard, Susana Coelho, Markus Klinger, et al.. The cell wall active mannuronan C5-epimerases in the model brown alga Ectocarpus: from gene context to recombinant protein. Glycobiology, Oxford University Press (OUP), 2016, ⟨10.1093/glycob/cww040⟩. ⟨hal-01300260⟩

Sylvie Rousvoal, Betty Bouyer, Camilo López-Cristoffanini, Catherine Boyen, Jonas Collén. Mutant swarms of a totivirus-like entities are present in the red macroalga Chondrus crispus and have been partially transferred to the nuclear genome. Journal of Phycology, Wiley, 2016, 52 (4), pp.493-504. ⟨10.1111/jpy.12427⟩. ⟨hal-01320013⟩

Patricia Bonin, Agnès Groisillier, Alice Raimbault, Anaïs Guibert, Catherine Boyen, et al.. Molecular and biochemical characterization of mannitol-1-phosphate dehydrogenase from the model brown alga Ectocarpus sp.. Phytochemistry, Elsevier, 2015, 117, pp.509-520. ⟨10.1016/j.phytochem.2015.07.015⟩. ⟨hal-01200617⟩

Agnès Groisillier, Zhanru Shao, Gurvan Michel, Sophie Goulitquer, Patricia Bonin, et al.. Mannitol metabolism in brown algae involves a new phosphatase family.. Journal of Experimental Botany, Oxford University Press (OUP), 2014, 65 (2), pp.559-70. ⟨10.1093/jxb/ert405⟩. ⟨hal-01002445⟩

Simon M Dittami, Tristan Barbeyron, Catherine Boyen, Jeanne Cambefort, Guillaume Collet, et al.. Genome and metabolic network of "Candidatus Phaeomarinobacter ectocarpi" Ec32, a new candidate genus of Alphaproteobacteria frequently associated with brown algae. Frontiers in Genetics, Frontiers, 2014, 5, pp.241. ⟨10.3389/fgene.2014.00241⟩. ⟨hal-01079739⟩

Sylvain Prigent, Guillaume Collet, Simon Dittami, Ludovic Delage, Floriane Ethis de Corny, et al.. The genome-scale metabolic network of Ectocarpus siliculosus (EctoGEM): a resource to study brown algal physiology and beyond. The Plant Journal, 2014, 80 (2), pp.367-381. ⟨10.1111/tpj.12627⟩. ⟨hal-02937717⟩

Andrés Ritter, Simon M Dittami, Sophie Goulitquer, Juan A Correa, Catherine Boyen, et al.. Transcriptomic and metabolomic analysis of copper stress acclimation in Ectocarpus siliculosus highlights signaling and tolerance mechanisms in brown algae. BMC Plant Biology, BioMed Central, 2014, 14, pp.116. ⟨10.1186/1471-2229-14-116⟩. ⟨hal-01311060⟩

Nathalie Kowalczyk, Sylvie Rousvoal, Cécile Hervé, Catherine Boyen, Jonas Collén. RT-qPCR normalization genes in the red alga Chondrus crispus.. PLoS ONE, Public Library of Science, 2014, 9 (2), pp.e86574. ⟨10.1371/journal.pone.0086574⟩. ⟨hal-01002409⟩

Jonas Collén, Betina Porcel, Wilfrid Carré, Steven G Ball, Cristian Chaparro, et al.. Genome structure and metabolic features in the red seaweed Chondrus crispus shed light on evolution of the Archaeplastida.. Proceedings of the National Academy of Sciences of the United States of America , National Academy of Sciences, 2013, 110 (13), pp.5247-52. ⟨10.1073/pnas.1221259110⟩. ⟨hal-01073830⟩

J. Mark Cock, Lieven Sterck, Sophia Ahmed, Andrew E. Allen, Grigoris Amoutzias, et al.. The Ectocarpus Genome and Brown Algal Genomics The Ectocarpus Genome Consortium. Advances in Botanical Research, Elsevier, 2012, 64, pp.141 - 184. ⟨10.1016/B978-0-12-391499-6.00005-0⟩. ⟨hal-02649287⟩

Simon M. Dittami, Antoine Gravot, David Renault, Sophie Goulitquer, Anja Eggert, et al.. Integrative analysis of metabolite and transcript abundance during the short-term response to saline and oxidative stress in the brown alga Ectocarpus siliculosus.. Plant Cell & Environment, 2011, 34 (4), pp.629-642. ⟨10.1111/j.1365-3040.2010.02268.x⟩. ⟨hal-00597335⟩

Thierry Tonon, Damien Eveillard, Sylvain Prigent, Jérémie Bourdon, Philippe Potin, et al.. Toward systems biology in brown algae to explore acclimation and adaptation to the shore environment.. OMICS, Mary Ann Liebert, 2011, 15 (12), pp.883-892. ⟨10.1089/omi.2011.0089⟩. ⟨hal-00661751⟩

Thierry Tonon, Damien Eveillard, Sylvain Prigent, Jérémie Bourdon, Philippe Potin, et al.. Toward Systems Biology in Brown Algae to Explore Acclimation and Adaptation to the Shore Environment. OMICS, Mary Ann Liebert, 2011, 15 (12), pp.883-892. ⟨10.1089/omi.2011.0089⟩. ⟨hal-02937721⟩

Simon M Dittami, Caroline Proux, Sylvie Rousvoal, Akira F Peters, J Mark Cock, et al.. Microarray estimation of genomic inter-strain variability in the genus Ectocarpus (Phaeophyceae). BMC Molecular Biology, BioMed Central, 2011, 12, pp.2. ⟨10.1186/1471-2199-12-2⟩. ⟨hal-00925432⟩

Agnès Groisillier, Cécile Hervé, Alexandra Jeudy, Etienne Rebuffet, Pierre François Pluchon, et al.. MARINE-EXPRESS: taking advantage of high throughput cloning and expression strategies for the post-genomic analysis of marine organisms.. Microb Cell Fact, 2010, 9, pp.45. ⟨10.1186/1475-2859-9-45⟩. ⟨hal-00609166⟩

Antoine Gravot, Simon Dittami, Sylvie Rousvoal, Raphaël Lugan, Anja Eggert, et al.. Diurnal oscillations of metabolite abundances and gene analysis provide new insights into central metabolic processes of the brown alga Ectocarpus siliculosus. New Phytologist, Wiley, 2010, 188 (4), pp.98-110. ⟨10.1111/j.1469-8137.2010.03400.x⟩. ⟨hal-02661518⟩

J. Mark Cock, Lieven Sterck, Pierre Rouzé, Delphine Scornet, Andrew E. Allen, et al.. The $Ectocarpus$ genome and the independent evolution of multicellularity in brown algae. Nature, Nature Publishing Group, 2010, 465 (7298), pp.617-621. ⟨10.1038/nature09016⟩. ⟨cea-00906990⟩

Cécile Herve, Pierre-Olivier de Franco, Agnès Groisillier, Thierry Tonon, Catherine Boyen. New members of the glutathione transferase family discovered in red and brown algae. Biochemical Journal, Portland Press, 2008, 412 (3), pp.535-544. ⟨10.1042/BJ20071464⟩. ⟨hal-00478902⟩

Bénédicte Charrier, Susana Coelho, Aude Le Bail, Thierry Tonon, Gurvan Michel, et al.. Development and physiology of the brown alga Ectocarpus siliculosus: two centuries of research. New Phytologist, Wiley, 2008, 177 (2), pp.319-332. ⟨10.1111/j.1469-8137.2007.02304.x⟩. ⟨hal-01806426⟩

Emmanuel Gaquerel, Cécile Hervé, Christophe Labrière, Catherine Boyen, Philippe Potin, et al.. Evidence for oxylipin synthesis and induction of a new polyunsaturated fatty acid hydroxylase activity in Chondrus crispus in response to methyljasmonate. Biochimica et Biophysica Acta (BBA) - Molecular and Cell Biology of Lipids, 2007, 1771 (5), pp.565-575. ⟨10.1016/j.bbalip.2007.02.007⟩. ⟨hal-02332855⟩

Catherine Boyen, Cécile Herve, Thierry Tonon, Jonas Collen, Erwan Corre. NADPH oxidases in Eukaryotes: red algae provide new hints!. Current Genetics, Springer Verlag, 2006, 49, pp.190-207. ⟨hal-00091933⟩

Jonas Collén, Vincent Roeder, Sylvie Rousvoal, Olivier Collin, Bernard Kloareg, et al.. An expressed sequence tag analysis of thallus and regenerating protoplasts of Chondrus crispus (Gigartinales, Rhodophyceae). Journal of Phycology, Wiley, 2006. ⟨inria-00327543⟩

Catherine Boyen, Jonas Collen, Bernard Kloareg, Sylvie Rousvoal, Vincent Roeder, et al.. An expressed sequence tag analysis of thallus and regenerating protoplasts of Chondrus crispus (Gigartinales, Rhodophyceae). Journal of Phycology, Wiley, 2006, 42, pp.104-112. ⟨hal-00091940⟩

Jonas Collen, Cécile Hervé, Isabelle Guisle-Marsollier, Jean Leger, Catherine Boyen. Expression profiling of Chondrus crispus (Rhodophyta) after exposure to methyl jasmonate. Journal of Experimental Botany, Oxford University Press (OUP), 2006, 57 (14), pp.3869-3881. ⟨10.1093/jxb/erl171⟩. ⟨hal-02332848⟩

Catherine Boyen, Yves Bertheau, T. Barbeyron, Bernard Kloareg. Preparation of guluronate lyase from pseudomonas-alginovora for protoplast isolation in laminaria. Enzyme and Microbial Technology, Elsevier, 1990, 12 (11), pp.885-890. ⟨10.1016/0141-0229(90)90027-N⟩. ⟨hal-02715735⟩

Thierry Tonon, Patricia Bonin, Sylvain Prigent, Z. Shao, Agnès Groisillier, et al.. Systems biology approaches at cellular level in the model organism Ectocarpus siliculosus to better understand brown algal physiology. Esil 2012: algal post-genomics, Apr 2012, Roscoff, France. ⟨hal-00760640⟩

J. Mark Cock, Jonas Collen, Lieven Sterck, Pierre Rouzé, Delphine Scornet, et al.. Nature, nurture and the structure of macroalgal genomes. 5. European Phycological Congress, Sep 2011, Rhodes, Greece. ⟨hal-02749757⟩

Dominique Joly, Denis Faure, Catherine Boyen, Pascal Simonet. Enjeux, défis, verrous scientifiques et perspectives. La génomique environnementale, la révolution du séquençage à haut débit., ISTE Editions, pp.25-.., 2016, 978-1-78405-151-8. ⟨hal-01923255⟩

B. Porcel, W. Carre, S. Ball, C. Chaparro, T. Barbeyron, et al.. Chondrus crispus – A Present and Historical Model Organism for Red Seaweeds. Advances in Botanical Research, 110 (13), pp.53-89, 2014, ⟨10.1016/b978-0-12-408062-1.00003-2⟩. ⟨hal-02332890⟩

Catherine Boyen, Pascal Jaouen. Les Biotechnologies Marines dans le Grand Ouest. 2015, 61 p. ⟨insu-01164013⟩

Simon M Dittami, Akira Peters, John West, Thierry Cariou, Hetty Kleinjan, et al.. Revisiting Australian Ectocarpus subulatus (Phaeophyceae) from the Hopkins River: distribution, abiotic environment, and associated microbiota. 2019. ⟨hal-02340942⟩

Bertille Burgunter-Delamare, Hetty Kleinjan, Clémence Frioux, Enora Fremy, Margot Wagner, et al.. Metabolic complementarity between a brown alga and associated 1 cultivable bacteria provide indications of beneficial interactions. 2019. ⟨hal-02333039⟩

Simon M Dittami, Erwan Corre, Loraine Brillet-Guéguen, Agnieszka Lipinska, Méziane Aite, et al.. The genome of Ectocarpus subulatus -a highly stress-tolerant brown alga. 2019. ⟨hal-02333021⟩

Anne Atlan, Catherine Boyen, Laurence Hurst. HOW TO LIVE WITHOUT SEX: THE ANSWER OF CYTOPLASMIC GENOMES. 2018. ⟨hal-01957601⟩

Eric Maréchal, Catherine Boyen, Matthieu Arlat, Cécile Bousquet-Antonelli, Yohann Boutté, et al.. Rapport de conjoncture. Section 23 Biologie Végétale Intégrative.. [Rapport de recherche] Comité Nationale de la Recherche Scientifique. 2019. ⟨hal-02954889⟩

Jean François Silvain, Didier Babin, Robert Barbault, Philippe Bertin, Bernard Bodo, et al.. Prospective pour la recherche française en biodiversité. 2009. ⟨hal-02820971⟩