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42

Caroline Bidot - Ingénieure Calcul Scientifique


Journal articles6 documents

  • Natacha Go, Catherine Belloc, Caroline Bidot, Suzanne Touzeau. Why, when and how should exposure be considered at the within-host scale? A modelling contribution to PRRSv infection. Mathematical Medicine and Biology, Oxford University Press (OUP), 2019, 36 (2), pp.179-206. ⟨10.1093/imammb/dqy005⟩. ⟨hal-01947667⟩
  • Jordi Ferrer Savall, Caroline Bidot, Mily Leblanc-Maridor, Catherine Belloc, Suzanne Touzeau. Modelling Salmonella transmission among pigs from farm to slaughterhouse: Interplay between management variability and epidemiological uncertainty. International Journal of Food Microbiology, Elsevier, 2016, 229, pp.33-43. ⟨10.1016/j.ijfoodmicro.2016.03.020⟩. ⟨hal-01334840⟩
  • Natacha Go, Caroline Bidot, Catherine Belloc, Suzanne Touzeau. Integrative Model of the Immune Response to a Pulmonary Macrophage Infection: What Determines the Infection Duration?. PLoS ONE, Public Library of Science, 2014, 9 (9), pp.e107818. ⟨10.1371/journal.pone.0107818⟩. ⟨hal-01099937⟩
  • Laurence Mioche, A. Brigand, Caroline Bidot, Jean-Baptiste Denis. Fat-free mass predictions through a bayesian network enable body composition comparisons in various populations. Journal of Nutrition, American Society for Nutrition, 2011, 141 (8), pp.1573-1580. ⟨10.3945/jn.111.137935⟩. ⟨hal-02645997⟩
  • Laurence Mioche, Caroline Bidot, Jean-Baptiste Denis. Body composition predicted with a Bayesian network from simple variables. British Journal of Nutrition, Cambridge University Press (CUP), 2011, 105 (8), pp.1265-1271. ⟨10.1017/S0007114510004848⟩. ⟨hal-02646675⟩
  • Caroline Bidot, Frédéric Gruy, Claire-Sophie Haudin, Fatima Zahra El Hentati, Bernard Guy, et al.. Mathematical modeling of T-cell activation kinetic. Journal of Computational Biology, Mary Ann Liebert, 2008, 15 (1), pp.105-128. ⟨10.1089/cmb.2007.0125⟩. ⟨emse-00449722⟩

Conference papers25 documents

  • Elisabeta Vergu, Gael Beaunée, Caroline Bidot, Patrick Hoscheit, Pauline Ezanno. Analysis of the cattle trade network in France to inform epidemiological risk. 11. European Conference on Mathematical and Theoretical Biology (ECMTB), Jul 2018, Lisbonne, Portugal. 882 p. ⟨hal-02734821⟩
  • Madalina Olteanu, Gael Beaunée, Caroline Bidot, Catherine Laredo, Elisabeta Vergu. Using SOMbrero for clustering and visualizing large cattle-trading networks. BIFI International Conference 2018 "Complexity, Networks & Collective Behavior", Feb 2018, Zaragoza, Spain. 113 p. ⟨hal-02734785⟩
  • Suzanne Touzeau, Natacha Go, Caroline Bidot, Catherine Belloc. Why, when and how should exposure be considered in a model representing the within-host immune response to infection?. Emerging Trends in Applied Mathematics and Mechanics (ETAMM), May 2016, Perpignan, France. ⟨hal-01334850⟩
  • Natacha Go, Catherine Belloc, Caroline Bidot, Suzanne Touzeau. Towards a better understanding of the within-host dynamics to PRRSv: insights from modelling approach. International Porcine Reproductive And Respiratory Syndrome Congress, Jun 2015, Gand, Belgium. ⟨hal-01237154⟩
  • Natacha Go, Catherine Belloc, Caroline Bidot, Suzanne Touzeau. Towards an exploration of PRRSv vaccine efficiency in silico. European Symposium of Porcine Health Management, Apr 2015, Nantes, France. ⟨hal-01237151⟩
  • Jean-Pierre Gauchi, Annie Bouvier, Caroline Bidot, Louis Coroller, Jean-Pierre Vila, et al.. FILTREX :A new software for parametric identification and optimal sampling os experiments for complex microbiological dynamic systems by nonlinear filtering. AgroStat2014 : 13èmes Journées Agro-Industrie et Méthodes Statistiques, Mar 2014, Rabat, Morocco. ⟨hal-01608678⟩
  • Natacha Go, Caroline Bidot, Catherine Belloc, Suzanne Touzeau. Modelling the infection and immune dynamics induced by a pathogen targeting pulmonary macrophages : influence of strain virulence and host exposure. 9th European Conference on Mathematical and Theoretical Biology, Jun 2014, Göteborg, Sweden. 16p. ⟨hal-01099968⟩
  • Natacha Go, Caroline Bidot, Catherine Belloc, Suzanne Touzeau. Modelling the interactions between the Porcine Respiratory and Reproductive Syndrome Virus (PRRSV) and its target cells: conditions for virus clearance.. 9ème colloque du réseau français d'Immunologie des Animaux Domestiques (IAD), Institut National de Recherche Agronomique (INRA). UR Unité de recherche Virologie et Immunologie Moléculaires (0892)., Jan 2013, Paris, France. 18 p. ⟨hal-01019512⟩
  • Jean-Pierre Gauchi, Annie Bouvier, Caroline Bidot, Louis Coroller, J.-C. Augustin, et al.. FILTREX : A new software for parametric identification and optimal sampling os experiments for complex microbiological dynamic systems by nonlinear filtering. Sofware day at the 8th International Conference Predictive modelling in food, Sep 2013, Paris, France. ⟨hal-01604491⟩
  • Natacha Go, Caroline Bidot, Catherine Belloc, Suzanne Touzeau. Modelling of immune response to a respiratory virus targeting pulmonary macrophages : exploration of the host susceptibility and viral virulence.. SBIP 2013: Systems Biology Approach to Infectious Processes, May 2013, Lyon, France. 16 diapos. ⟨hal-01000672⟩
  • Natacha Go, Caroline Bidot, Catherine Belloc, Suzanne Touzeau. Identification of key immune mechanisms for the resolution of PRRSv infection by a modelling approach. 4. International Conference on Infectious Disease Dynamics (Epidemics), Nov 2013, Amsterdam, Netherlands. ⟨hal-02802947⟩
  • Elisabeta Vergu, Sébastien Ballesteros, Anton Camacho, Caroline Bidot, Bernard Cazelles. Stochastic metapopulation modeling of multi-strain influenza dynamics. MODEMAVE, May 2012, Angers, France. 1p. ⟨hal-02811354⟩
  • Elisabeta Vergu, Sébastien Ballesteros, Caroline Bidot, Bernard Cazelles, Anton Camacho. Stochastic metapopulation modeling of influenza dynamics: framework and conditions for replacement and coexistence of several co-circulating subtypes. Journées de l’ANR Manège, Jan 2012, Marseille, France. 53 diapos. ⟨hal-02806242⟩
  • Jean-Pierre Gauchi, Jean-Pierre Vila, Caroline Bidot, Jean-Christophe Augustin, Louis Coroller, et al.. Une approche particulaire de l'identification et de l'inférence statistique de modèle en microbiologie prévisionnelle. 12th. European Symposium on statistical methods for the food industry, Feb 2012, Paris, France. ⟨hal-02749946⟩
  • Jean-Pierre Gauchi, Jean-Pierre Vila, Caroline Bidot, L. Coroller, Jc Augustin, et al.. FILTREX : Un logiciel convivial pour la microbiologie alimentaire prévisionnelle. Modélisation dynamique de la croissance ou décroissance de populations bactériennes. Journées de microbiologie de l'INRA, 2012, Jouy-en-Josas, France. ⟨hal-01604492⟩
  • Natacha Go, Caroline Bidot, Catherine Belloc, Suzanne Touzeau. Modelling the interactions between virus and pulmonary macrophages as target cells in a respiratory infection: conditions for virus clearance. 11. International Conference on Artificial Immune Systems (ICARIS), Aug 2012, Taormina, Italy. pp.20. ⟨hal-01019043⟩
  • Suzanne Touzeau, Caroline Bidot. Estimating scrapie epidemiological parameters: comparison between a population dynamic model and an individual-based model. 8. European Conference on Mathematical and Theoretical Biology (ECMTB), Jun 2011, Krakow, Poland. ⟨hal-02807902⟩
  • Jean-Pierre Gauchi, Jean-Pierre Vila, Caroline Bidot, E. Atlijani, Louis Coroller, et al.. FILTREX: A new software for parametric identification and optimal sampling of experiments for complex microbiological dynamic systems by nonlinear filtering. 7th International Conference on Predictive Modelling of Food Quality and Safety (ICPMF7), Sep 2011, Dublin, Ireland. ⟨hal-02747013⟩
  • Laurence Mioche, Caroline Bidot, Jean-Baptiste Denis. Predictive changes in body composition during aging. 1rst. International Congress of Translational Research in Human Nutrition, Mar 2010, Clermont-Ferrand, France. pp.1 P. ⟨hal-02820478⟩
  • Jean-Pierre Gauchi, Caroline Bidot, J.C. Augustin, Jean-Pierre Vila. Identification of complex microbiological dynamic systems by nonlinear filtering. 6th. International Conference predictive Modeling in Foods, Sep 2009, Washington, United States. pp.62. ⟨hal-00858561⟩
  • Christine Jacob, Laurence Maillard-Teyssier, Jean-Baptiste Denis, Caroline Bidot. A branching process approach for the propagation of the Bovine Spongiform Encephalopathy in Great-Britain. Workshop on Branching Processes and Their Applications (WBPA09), Apr 2009, Badajoz, Spain. 24 diapos. ⟨hal-02751937⟩
  • Jean-Pierre Vila, Jean-Pierre Gauchi, Caroline Bidot. Identification de systèmes dynamiques microbiologiques complexes par filtrage non linéaire. 41ème Journées de Statistique de la SFdS, May 2009, Bordeaux, France. ⟨hal-02756228⟩
  • Jean-Pierre Vila, Jean-Pierre Gauchi, Caroline Bidot. Identification de systèmes dynamiques microbiologiques complexes par filtrage non linéaire. 41èmes Journées de Statistique, SFdS, Bordeaux, 2009, Bordeaux, France, France. ⟨inria-00386650⟩
  • Jean-Pierre Gauchi, Caroline Bidot, J.C. Augustin, Jean-Pierre Vila. Identification of complex microbiological dynamic systems by nonlinear filtering. 6th. International Conference predictive Modeling in Foods, Sep 2009, Washington, United States. ⟨hal-02754475⟩
  • Christine Jacob, Laurence Maillard-Teyssier, Jean-Baptiste Denis, Caroline Bidot. Estimation and prediction for the BSE epidemic in Great Britain using a stochastic model. Prion2008, Oct 2008, Madrid, Spain. ⟨hal-02750535⟩

Reports5 documents

  • Justine Guillaumont, Caroline Bidot, Suzanne Touzeau. Modélisation du portage des salmonelles dans un élevage porcin. [Rapport Technique] 2017-2, INRA, UR1404 Mathématiques et Informatique Appliquées du Génome à l'Environnement. 2017, pp.47. ⟨hal-01605512v2⟩
  • Caroline Bidot, Jean-Pierre Gauchi, Jean-Pierre Vila. Programmation MATLAB du filtrage non linéaire par convolution de particules pour l'identification et l'estimation d'un système dynamique microbiologique. [Rapport Technique] 2009-3, 2009. ⟨hal-02823876⟩
  • Caroline Bidot, Jean-Pierre Gauchi, Jean-Pierre Vila. Programmation MATLAB : du filtrage non linéaire par convolution de particules pour l'identification et l'estimation d'un système dynamique microbiologique. [Research Report] 2009-3, INRA. 2009. ⟨hal-00858566⟩
  • Najat Ziyadi, Suzanne Touzeau, Caroline Bidot, Jean-Pierre Treuil, My Lhassan Hbid. Modèle individu-centré de transmission de la tremblante dans un troupeau ovin. [Rapport Technique] 2008-4, 2008. ⟨hal-02822910⟩
  • Christine Jacob, Laurence Maillard-Teyssier, Jean-Baptiste Denis, Caroline Bidot. Stochastic modelling of the incidence of clinical cases of a rare fatal SEI disease in a large branching population structured in ages. Example of the BSE epidemic in Great-Britain. [Other] R 2008-5, 2008, 54 p. ⟨hal-02814786⟩

Software3 documents

  • Caroline Bidot, Hervé Monod, Matieyendou Lamboni. multisensi: Multivariate Sensitivity Analysis. 2016. ⟨hal-02801278⟩
  • Jean-Pierre Gauchi, Caroline Bidot, Annie Bouvier, Jean-Pierre Vila. FILTREX. 2011. ⟨hal-02809267⟩
  • Caroline Bidot, Jean-Pierre Gauchi. XT12EDO. 2007. ⟨hal-02815834⟩

Book sections1 document

  • Christine Jacob, Laurence Maillard-Teyssier, Jean-Baptiste Denis, Caroline Bidot. A branching process approach for the propagation of the Bovine Spongiform Encephalopathy in Great-Britain. Workshop on branching processes and their applications, 197, Springer, 2010, Lecture Notes in Statistics, 978-3-642-11154-9. ⟨hal-02817555⟩

Other publications1 document

  • Catherine Belloc, Caroline Bidot, Stéphane Krebs, Amandine Lurette, Suzanne Touzeau. Modélisation pour la maîtrise du portage de salmonelles par les porcs. 2011. ⟨hal-02804142⟩

Theses1 document

  • Caroline Bidot. Modélisation mathématique de la réponse lymphocytaire T spécifique à une infection virale. Génie des procédés. Ecole Nationale Supérieure des Mines de Saint-Etienne, 2006. Français. ⟨tel-00085132⟩