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Sorina POP

62
Documents
Identifiants chercheurs

Présentation

1. Education ------------ - 2010 - 2013: PhD, Computer Science, INSA de Lyon, France. Thesis subject: Exploiting heterogeneous distributed systems for Monte-Carlo simulations in the medical field. Supervisors: H.Benoit-Cattin and T. Glatard. - 2007 - 2008: Master of Science, Systems and Images, INSA de Lyon, France. Thesis subject: Optimisation of the distributed execution of a medical application on the Grid. Supervisor: D. Sarrut - 2004 - 2007: Engineering degree, Telecommunications, INSA de Lyon, France. 2. Professional experience -------------------------- - 2007 - present: CNRS research engineer at CREATIS laboratory, Lyon, France. - 2010 - 2013: PhD Student, INSA de Lyon, France. 3. Research interests --------------------- - Grid and Cloud computing - Modeling and simulation of distributed application workflows and services - Reproducibility of scientific results - Interoperability among computing and storage platforms - Data management

Publications

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MicroVIP: Microscopy image simulation on the Virtual Imaging Platform

Ahmad Ali , Guillaume Vanel , Sorina Camarasu-Pop , Axel Bonnet , Carole Frindel
SoftwareX, 2021, 16, pp.100854. ⟨10.1016/j.softx.2021.100854⟩
Article dans une revue hal-03619436v1
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Multiple sclerosis lesions segmentation from multiple experts: The MICCAI 2016 challenge dataset

Olivier Commowick , Michaël Kain , Romain Casey , Roxana Ameli , Jean-Christophe Ferré
NeuroImage, 2021, 244, pp.1-8. ⟨10.1016/j.neuroimage.2021.118589⟩
Article dans une revue hal-03358961v1

Boutiques: a flexible framework to integrate command-line applications in computing platforms

Tristan Glatard , Gregory Kiar , Tristan Aumentado-Armstrong , Natacha Beck , Pierre Bellec
GigaScience, 2018, 7 (5), ⟨10.1093/gigascience/giy016⟩
Article dans une revue hal-01817780v1
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Objective Evaluation of Multiple Sclerosis Lesion Segmentation using a Data Management and Processing Infrastructure

Olivier Commowick , Audrey Istace , Michael Kain , Baptiste Laurent , Florent Leray
Scientific Reports, 2018, 8 (1), pp.13650. ⟨10.1038/s41598-018-31911-7⟩
Article dans une revue inserm-01847873v3
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The first MICCAI challenge on PET tumor segmentation

Mathieu Hatt , Baptiste Laurent , Anouar Ouahabi , Hadi Fayad , Shan Tan
Medical Image Analysis, 2018, 44, pp.177-195. ⟨10.1016/j.media.2017.12.007⟩
Article dans une revue hal-01659162v1
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A Framework for the Generation of Realistic Synthetic Cardiac Ultrasound and Magnetic Resonance Imaging Sequences from the same Virtual Patients

Yitian Zhou , Sophie Giffard-Roisin , Mathieu de Craene , Sorina Camarasu-Pop , Jan d'Hooge
IEEE Transactions on Medical Imaging, 2018, 37 (3), pp.741-754. ⟨10.1109/TMI.2017.2708159⟩
Article dans une revue hal-01533366v1
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Software architectures to integrate workflow engines in science gateways

Tristan Glatard , Marc-Etienne Rousseau , Sorina Camarasu-Pop , Reza Adalat , Natacha Beck
Future Generation Computer Systems, 2017, 75, pp.239-255. ⟨10.1016/j.future.2017.01.005⟩
Article dans une revue hal-01572420v1

Standardized evaluation system for left ventricular segmentation algorithms in 3D echocardiography

Olivier Bernard , J.G.H. Bosch , B Heyde , M. Alessandrini , D. Barbosa
IEEE Transactions on Medical Imaging, 2016, 35 (4), pp.967-977. ⟨10.1109/TMI.2015.2503890⟩
Article dans une revue hal-01272359v1

Combining analytical modeling, realistic simulation and real experimentation for the optimization of Monte-Carlo applications on the European Grid Infrastructure

Sorina Camarasu-Pop , Tristan Glatard , Hugues Benoit-Cattin
Future Generation Computer Systems, 2016, 57, pp.13-23. ⟨10.1016/j.future.2015.11.002⟩
Article dans une revue hal-01272336v1

Enabling 3D-Liver Perfusion Mapping from MR-DCE Imaging Using Distributed Computing

B. Leporq , S. Camarasu-Pop , E. E. Davila-Serrano , F. Pilleul , O. Beuf
Journal of Medical Engineering, 2013, 2013, pp.ID 471682. ⟨10.1155/2013/471682⟩
Article dans une revue hal-00797856v1

Monte-Carlo Simulation on Heterogeneous Distributed Systems: a Computing Framework with Parallel Merging and Checkpointing Strategies

S. Camarasu-Pop , T. Glatard , R. Ferreira da Silva , P. Gueth , D. Sarrut
Future Generation Computer Systems, 2013, 3, pp.728-738. ⟨10.1016/j.future.2012.09.003⟩
Article dans une revue hal-00797962v1
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A virtual imaging platform for multi-modality medical image simulation.

Tristan Glatard , Carole Lartizien , Bernard Gibaud , Rafael Ferreira da Silva , Germain Forestier
IEEE Transactions on Medical Imaging, 2013, 32 (1), pp.110-8. ⟨10.1109/TMI.2012.2220154⟩
Article dans une revue inserm-00762497v1

A model of pilot-job resource provisioning on production grids

T Glatard , Sorina Camarasu-Pop
Parallel Computing, 2011, 37, pp.684-692. ⟨10.1016/j.parco.2011.04.001⟩
Article dans une revue hal-01950480v1

Dynamic partitioning of GATE Monte-Carlo simulations on EGEE

Sorina Camarasu-Pop , T Glatard , J. T. Moscicki , H. Benoit-Cattin , D. Sarrut
Journal of Grid Computing, 2010, 8 (2), pp.241-259. ⟨10.1007/s10723-010-9153-0⟩
Article dans une revue hal-01950481v1
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Deploying container-based applications on EGI with VIP

Axel Bonnet , Sandesh Patil , Sorina Camarasu-Pop , Tristan Glatard
JCAD 2022 - Journées Calcul Données, Oct 2022, Dijon, France
Communication dans un congrès hal-03975757v1
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Projet ReproVIP

Gaël Vila , Axel Bonnet , Carole Frindel , Helene Ratiney , Frédéric Cervenansky
Journée Reproductibilité Labex PRIMES, Dec 2022, Lyon, France
Communication dans un congrès hal-04006460v1
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MSSEG-2: Un challenge d'imagerie médicale sur VIP

Sorina Camarasu-Pop , Axel Bonnet , Arthur Masson , Michael Kain , Michel Dojat
JCAD 2021, Dec 2021, En ligne, France
Communication dans un congrès hal-03708108v1
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MSSEG-2: A medical imaging challenge on VIP

Sorina Camarasu-Pop , Axel Bonnet , Arthur Masson , Michael Kain , Michel Dojat
EGI Conference 2021, Oct 2021, En ligne, France
Communication dans un congrès hal-03708105v1
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Exploiting GPUs on distributed infrastructures for medical imaging applications with VIP and DIRAC

Sorina Camarasu-Pop , Carole Lartizien , Thomas Grenier , Axel Bonnet , Pascal Wassong
42nd international convention on information and communication technology, electronics and microelectronics, May 2019, Opatija, Croatia. pp.190-195, ⟨10.23919/mipro.2019.8757075⟩
Communication dans un congrès hal-02327867v1
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Enabling Large Scale Data Production for OpenDose with GATE on the EGI Infrastructure

Maxime Chauvin , Gilles Mathieu , Sorina Camarasu-Pop , Axel Bonnet , Manuel Bardiès
2019 19th IEEE/ACM International Symposium on Cluster, Cloud and Grid Computing (CCGRID), May 2019, Larnaca, France. pp.658-665, ⟨10.1109/CCGRID.2019.00084⟩
Communication dans un congrès inserm-02869860v1
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Open research: linking the bits and pieces with OpenAIRE-connect

Camille Maumet , Xavier Rolland , Axel Bonnet , Sorina Camarasu-Pop , Argiro Kokogiannaki
OHBM 2019 - 25th Annual Meeting of the Organization for Human Brain Mapping, Jun 2019, Rome, Italy. pp.1-6
Communication dans un congrès inserm-02151177v1
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Open Science for the Neuroinformatics community

Sorina Camarasu-Pop , Axel Bonnet , Camille Maumet , Michael Kain , Christian Barillot
DI4R 2018 - Digital Infrastructures for Research, Oct 2018, Lisbon, Portugal. pp.1
Communication dans un congrès inserm-01846994v1

Evaluation through Realistic Simulations of File Replication Strategies for Large Heterogeneous Distributed Systems

Anchen Chai , Sorina Camarasu-Pop , Tristan Glatard , Hugues Benoit-Cattin , Frederic Suter
Europar 2018 - 24th International European Conference on Parallel and Distributed Computing ; Workshop HeteroPar 2018, Aug 2018, Turin, Italy. pp.409-420, ⟨10.1007/978-3-030-10549-5_32⟩
Communication dans un congrès hal-01887369v1
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Interoperability with Boutiques and CARMIN

Sorina Camarasu-Pop , Axel Bonnet , Camille Maumet , Michael Kain , Christian Barillot
DI4R 2018 - Digital Infrastructures for Research, Oct 2018, Lisbon, Portugal. pp.1
Communication dans un congrès inserm-01846997v1
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FG-Cloud : un service de cloud computing fédéré pour le calcul scientifique

Cécile Cavet , Vincent Legoll , Jérôme Pansanel , Sorina Camarasu-Pop , Adrien Ramparison
Journées Réseaux de l’Enseignement et de la Recherche.(JRES ) 2017, Nov 2017, Nantes, France
Communication dans un congrès hal-02019194v1
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Modeling Distributed Platforms from Application Traces for Realistic File Transfer Simulation

Anchen Chai , Mohammad-Mahdi Bazm , Sorina Camarasu-Pop , Tristan Glatard , Hugues Benoit-Cattin
17th IEEE/ACM International Symposium on Cluster, Cloud and Grid Computing., May 2017, Madrid, Spain
Communication dans un congrès hal-01452694v1
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FG-SOL : un nouveau service pour la préservation et la réutilisation des logiciels de la recherche

Teresa Gomez-Diaz , Vincent Legoll , Jérôme Pansanel , Sorina Camarasu-Pop , Genevieve Romier
JRES 2017, RENATER, Nov 2017, Nantes, France. https://www.jres.org/fr/presentation?id=119
Communication dans un congrès hal-01806853v1

Protocole de caractérisation d'antenne radiofréquence pour l'IRM

L. Mahieu-Williame , S. Gaillard , D. Grenier , R. Bolbos , J.B. Langlois
SFRMBM, 2017, Bordeaux, France
Communication dans un congrès hal-01905449v1

Challenge on Endocardial Three-dimensional Ultrasound Segmentation (CETUS)

Olivier Bernard , Brecht Heyde , Martino Alessandrini , Daniel Barbosa , Sorina Camarasu-Pop
Challenge on Endocardial Three-dimensional Ultrasound Segmentation, Sep 2014, Boston, United States
Communication dans un congrès hal-02048165v1

CreaTools: A development framework for medical image processing software ; an application to segmentation, anomaly detection and quantification for coronary arteries

C. Mouton , E. E. Dávila Serrano , F. Cervenansky , S. Camarasu-Pop , E. Correa
European BioImage Analysis Symposium 2013, Oct 2013, Barcelone, Spain
Communication dans un congrès hal-00921503v1

Simulating Application Workflows and Services Deployed on the European Grid Infrastructure

S. Camarasu-Pop , T. Glatard , H. Benoit-Cattin
13th IEEE/ACM International Symposium on Cluster, Cloud, and Grid Computing, May 2013, Delft, Netherlands. pp.18-25, ⟨10.1109/CCGrid.2013.13⟩
Communication dans un congrès hal-00843917v1
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Instance nationale et multi-communauté de DIRAC pour France Grilles

Luisa Arrabito , David Bouvet , Sorina Camarasu-Pop , Yonny Cardenas , Nicolas Clémentin
journées scientifiques mésocentres et France Grilles 2012, Oct 2012, Paris, France
Communication dans un congrès hal-00766084v1
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Diffusion MRI Simulation with the Virtual Imaging Platform

Lihui Wang , Sorina Camarasu-Pop , Glatard Tristan , Yue-Min Zhu , Isabelle E. Magnin
journées scientifiques mésocentres et France Grilles 2012, Oct 2012, Paris, France
Communication dans un congrès hal-00766081v1

CreaTools: A Framework to Develop Medical Image Processing Software: Application to Simulate Pipeline Stent Deployment in Intracranial Vessels with Aneurysms

E. E. Dávila Serrano , L. Guigues , J.-P. Roux , F. Cervenansky , S. Camarasu-Pop
International Conference on Computer Vision and Graphics, Sep 2012, Warsaw, Poland. pp.55-62, ⟨10.1007/978-3-642-33564-8_7⟩
Communication dans un congrès hal-00829662v1
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Multi-modality image simulation with the Virtual Imaging Platform: Illustration on cardiac echography and MRI

T. Glatard , A. Marion , H. Benoit-Cattin , S. Camarasu-Pop , P. Clarysse
IEEE International Symposium on Biomedical Imaging (ISBI), May 2012, Barcelona, Spain. pp.98-101, ⟨10.1109/ISBI.2012.6235493⟩
Communication dans un congrès hal-00830243v1

CreaTools: a framework to develop medical image processing software. Application to simulate pipeline stent deployment in intracranial vessels with aneurysms

E. E. Dávila Serrano , L. Guigues , F. Cervenansky , S. Camarasu-Pop , J. G. Riveros Reyes
Int. Conf. Comput. Vision. Graphics., Sep 2012, Warsaw, Poland. pp.55-62
Communication dans un congrès hal-00842740v1

CreaTools: applications and development framework for medical image-processing software

E. E. Dávila Serrano , L. Guigues , J.P. Roux , F. Cervenansky , C. Mouton
13th Libre Software Meeting, Jul 2012, Genève, Switzerland
Communication dans un congrès hal-00831278v1

CreaTools: applications and development framework for medical image-processing software

E. E. Dávila Serrano , L. Guigues , J. P. Roux , F. Cervenansky , S. Camarasu-Pop
ISBI Workshop on Open Source Medical Image Analysis Software, Apr 2012, Barcelona, Spain
Communication dans un congrès hal-00831272v1

3D-liver quantitative perfusion mapping using EGEE grid with MR-DCE imaging and MS-325 blood pool contrast agent

B. Leporq , Sorina Camarasu-Pop , F. Pilleul , O. Beuf
ISMRM, 2011, Montreal, Canada. pp.2046
Communication dans un congrès hal-01950479v1
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Le calcul distribué : un outil pour l'imagerie médicale

Tristan Glatard , Rafael Ferreira da Silva , Sorina Camarasu-Pop
Rencontres Scientifiques France Grilles 2011, Sep 2011, Lyon, France
Communication dans un congrès hal-00653015v1
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Infrastructure DIRAC pour les Communautés Pluridisciplinaires

A. Tsaregorodtsev , V. Hamar , M. Sapunov , T. Glatard , S. Camarasu-Pop
Rencontres Scientifiques France Grilles 2011, Sep 2011, Lyon, France
Communication dans un congrès hal-00653025v1

3D-liver MR-DCE imaging for quantitative perfusion mapping using EGI grid

B. Leporq , Sorina Camarasu-Pop , F. Pilleul , O. Beuf
Colloque Recherche en Imagerie et Technologies pour la Santé (RITS), 2011, Rennes, France
Communication dans un congrès hal-01950477v1
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Multi-modality medical image simulation of biological models with the Virtual Imaging Platform (VIP)

Adrien Marion , Germain Forestier , Hugues Benoit-Cattin , Sorina Camarasu-Pop , Patrick Clarysse
International Symposium on Computer-Based Medical Systems (CBMS), Jun 2011, Bristol, United Kingdom. pp.1-6, ⟨10.1109/cbms.2011.5999141⟩
Communication dans un congrès hal-03813315v1

PBS proton treatment plan simulation with the GATE-Lab

P. Gueth , Sorina Camarasu-Pop , T Glatard , L. Grevillot , D. Sarrut
50th International PTCOG meeting (Particle Therapy Co-Operative Group), 2011, Philadelphia, US, Unknown Region
Communication dans un congrès hal-01950478v1
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Multi-infrastructure workflow execution for medical simulation in the Virtual Imaging Platform

Rafael Ferreira da Silva , Sorina Camarasu-Pop , Baptiste Grenier , Vanessa Hamar , David Manset
HealthGrid 2011, Jun 2011, Bristol, United Kingdom. pp.1-10
Communication dans un congrès hal-00677827v1

Two experiments with application-level quality of service on the EGEE grid

Pascal Calvat , Tristan Glatard , Sorina Camarasu-Pop , Ching Chuen Teck Mark , Tan Wen-Jun
GMAC '10, Jun 2010, Washington, United States. pp.ISBN: 978-1-4503-0100-8, ⟨10.1145/1809029.1809031⟩
Communication dans un congrès hal-00622791v1

Overview of Medical Data Management Solutions for Research Communities

Sorina Camarasu-Pop , Frederic Cervenansky , Yonny Cardenas , Jean-Yves Nief , Hugues Benoit-Cattin
Cluster, Cloud and Grid Computing (CCGrid), 2010 10th IEEE/ACM International Conference on, 2010, Unknown, Unknown Region. pp.739--744
Communication dans un congrès hal-01792367v1

Optimization of Mean-Shift scale parameters on the EGEE grid

T Li , Sorina Camarasu-Pop , T Glatard , T Grenier , H. Benoit-Cattin
Studies in health technology and informatics, Proceedings of Healthgrid 2010, 2010, Unknown, Unknown Region. pp.203-214, ⟨10.3233/978-1-60750-583-9-203⟩
Communication dans un congrès hal-01871246v1
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Towards Production-level Cardiac Image Analysis with Grids

Ketan Maheshwari , Tristan Glatard , Joel Schaerer , Bertrand Delhay , Sorina Camarasu-Pop
HealthGrid 2009, Jun 2009, Berlin, Germany. pp.31-40, ⟨10.3233/978-1-60750-027-8-31⟩
Communication dans un congrès hal-00677800v1

Modelling pilot-job applications on production grids

T Glatard , Sorina Camarasu-Pop
7th international workshop on Algorithms, Models and Tools for Parallel Computing on Heterogeneous Platforms (Heteropar 09), 2009, Delft, The, Netherlands
Communication dans un congrès hal-01950483v1

A comparison between ARC and gLite for medical image processing on Grids

T Glatard , X. . Zhou , Sorina Camarasu-Pop , O. . Smirnova , H. . Muller
2nd workshop on Medical imaging on GRID, HPC and GPU infrastructures: achievements and perspectives (MICCAI-Grid), 2009, London, UK, Unknown Region
Communication dans un congrès hal-01950482v1

Grids for Content-Based Medical Image Indexing and Retrieval

Sorina Camarasu-Pop , H. Benoit-Cattin , J. Montagnat , D. Racoceanu
ICT4Health, Oncomedia, 2008, Manila, The, Philippines
Communication dans un congrès hal-01950484v1

Towards a Virtual Radiological Platform Based on a Grid Infrastructure

Sorina Camarasu-Pop , H. Benoit-Cattin , L. Guigues , P. Clarysse , O. Bernard
Medical imaging on grids: achievements and perspectives (MICCAI Grid Workshop), 2008, New York, USA, Unknown Region. pp.85-95
Communication dans un congrès hal-01922371v1