Nombre de documents

37

CV de C. Brun


Article dans une revue36 documents

  • Julie Leca, Sébastien Martinez, Sophie Lac, Jérémy Nigri, Veronique Secq, et al.. Cancer-associated fibroblast-derived annexin A6+ extracellular vesicles support pancreatic cancer aggressiveness.. Journal of Clinical Investigation, American Society for Clinical Investigation, 2016, 126 (11), pp.4140-4156. <10.1172/JCI87734>. <hal-01408056>
  • Andreas Zanzoni, Christine Brun. Integration of quantitative proteomics data and interaction networks: Identification of dysregulated cellular functions during cancer progression. Methods, Elsevier, 2016, 93, pp.103 - 109. <10.1016/j.ymeth.2015.09.014>. <hal-01406344>
  • Charles E Chapple, Benoît Robisson, Lionel Spinelli, Celine Guien, Becker Emmanuelle, et al.. Extreme multifunctional proteins identified from a human protein interaction network.. Nature Communications, Nature Publishing Group, 2015, 6, pp.7412. <10.1038/ncomms8412>. <hal-01407399>
  • Charles E Chapple, Christine Brun. Redefining protein moonlighting.. Oncotarget, Impact journals, 2015, 6 (19), pp.16812-3. <10.18632/oncotarget.4793>. <hal-01407805>
  • Gilles Didier, Christine Brun, Anaïs Baudot. Identifying communities from multiplex biological networks.. PeerJ, PeerJ, 2015, 3:e1525, <10.7717/peerj.1525>. <hal-01255282>
  • Allegra Via, Bora Uyar, Christine Brun, Andreas Zanzoni. How pathogens use linear motifs to perturb host cell networks. Trends in Biochemical Sciences, Elsevier, 2015. <hal-01405781>
  • Chérif Chetouhi, Johan Panek, Ludovic Bonhomme, Hicham Elalaoui, Catherine Texier, et al.. Cross-talk in host–parasite associations: What do past and recent proteomics approaches tell us?. Infection, Genetics and Evolution, 2015, 33, pp.84 - 94. <10.1016/j.meegid.2015.04.015>. <hal-01406325>
  • Manon Baëza, Séverine Viala, Marjorie Heim, Amélie Dard, Bruno Hudry, et al.. Inhibitory activities of short linear motifs underlie Hox interactome specificity in vivo. eLife, eLife Sciences Publication, 2015, 4 (UNSP e06034). <hal-01215867>
  • C. Brun, M. Metral, M. Chancel, A. Kavounoudias, M. Luyat, et al.. Passive or simulated displacement of one arm (but not its mirror reflection) modulates the involuntary motor behavior of the other arm. Neuroscience, Elsevier - International Brain Research Organization, 2015, 285, pp.343 - 355. <10.1016/j.neuroscience.2014.11.036>. <hal-01419386>
  • Andreas Zanzoni, Charles E. Chapple, Christine Brun. Relationships between predicted moonlighting proteins, human diseases, and comorbidities from a network perspective. Frontiers in Physiology, Frontiers, 2015, <10.3389/fphys.2015.00171>. <hal-01202109>
  • Charles E Chapple, Carl Herrmann, Christine Brun. PrOnto database : GO term functional dissimilarity inferred from biological data.. Frontiers in Genetics, Frontiers, 2015, 6, pp.200. <10.3389/fgene.2015.00200>. <hal-01408050>
  • Johan Panek, Hicham El Alaoui, Anne Mone, Serge Urbach, Edith Demettre, et al.. Hijacking of Host Cellular Functions by an Intracellular Parasite, the Microsporidian Anncaliia algerae.. PLoS ONE, Public Library of Science, 2014, 9 (6), pp.e100791. <10.1371/journal.pone.0100791>. <hal-01053924>
  • Oussema Souiai, Fatma Guerfali, Slimane Ben Miled, Christine Brun, Alia Benkahla. In silico prediction of protein-protein interactions in human macrophages. BMC Research Notes, BioMed Central, 2014, 7, pp.157. <10.1073/pnas.091062498>. <pasteur-01098540>
  • Oussema Souiai, Fatma Guerfali, Slimane Ben Miled, Christine Brun, Alia Benkahla. In silico prediction of protein-protein interactions in human macrophages.. BMC Research Notes, BioMed Central, 2014, 7 (1), pp.157. <10.1186/1756-0500-7-157>. <inserm-00981319>
  • Maria Katsogiannou, Claudia Andrieu, Virginie Baylot, Anaïs Baudot, Nelson J Dusetti, et al.. The functional landscape of Hsp27 reveals new cellular processes such as DNA repair and alternative splicing and proposes novel anticancer targets.. Molecular and Cellular Proteomics, American Society for Biochemistry and Molecular Biology, 2014, pp.3585-601. <hal-01104661>
  • Lionel Spinelli, Philippe Gambette, Charles Chapple, Benoît Robisson, Anaïs Baudot, et al.. Clust&See: A Cytoscape plugin for the identification, visualization and manipulation of network clusters. BioSystems, Elsevier, 2013, 113 (2), pp.91-93. <10.1016/j.biosystems.2013.05.010>. <hal-00832028v2>
  • Emmanuelle Becker, Benoît Robisson, Charles E Chapple, Alain Guénoche, Christine Brun. Multifunctional proteins revealed by overlapping clustering in protein interaction network.. Bioinformatics, Oxford University Press (OUP), 2012, 28 (1), pp.84-90. <10.1093/bioinformatics/btr621>. <hal-00877694>
  • Alessandro Furlan, Fabienne Lamballe, Venturina Stagni, Azeemudeen Hussain, Sylvie Richelme, et al.. Met acts through Abl to regulate p53 transcriptional outcomes and cell survival in the developing liver.. J Hepatol, 2012, 57 (6), pp.1292-8. <10.1016/j.jhep.2012.07.044>. <hal-00843385>
  • Ouissem Souiai, Emmanuelle Becker, Carlos Prieto, Alia Benkahla, Javier De Las Rivas, et al.. Functional integrative levels in the human interactome recapitulate organ organization.. PLoS ONE, Public Library of Science, 2011, 6 (7), pp.e22051. <10.1371/journal.pone.0022051>. <hal-00877687>
  • Samir Merabet, Isma Litim-Mecheri, Daniel Karlsson, Richa Dixit, Mehdi Saadaoui, et al.. Insights into Hox protein function from a large scale combinatorial analysis of protein domains.. PLoS Genetics, Public Library of Science, 2011, 7 (10), pp.e1002302. <10.1371/journal.pgen.1002302>. <inserm-00711704>
  • Fanny Pilot-Storck, Emilie Chopin, Jean-François Rual, Anaïs Baudot, Pavel Dobrokhotov, et al.. Interactome Mapping of the Phosphatidylinositol 3-Kinase-Mammalian Target of Rapamycin Pathway Identifies Deformed Epidermal Autoregulatory Factor-1 as a New Glycogen Synthase Kinase-3 Interactor. Molecular and Cellular Proteomics (MCP Online), American Society for Biochemistry and Molecular Biology, 2010, 9, pp.1578-1593. <10.1074>. <ensl-00817476>
  • J.B. Angelelli, A. Baudot, C. Brun, A. Guenoche. Two local dissimilarity measures for weighted graphs with application to protein interaction networks.. Advances in Data Analysis and Classification, Springer Verlag, 2008, 2, pp.3-16. <hal-00310981>
  • A. Baudot, C. Brun. Outils bioinformatiques et ressources pour l'exploitation des données d'interactions protéine-protéine. Spectra Analysis, 2008, 263, pp.40-45. <hal-00322599>
  • A. Baudot, J.B. Angelelli, A. Guenoche, B. Jacq, C. Brun. Defining a modular signalling network from the fly interactome.. BMC Systems Biology, BioMed Central, 2008, pp.2: 45. <hal-00310982>
  • A. Baudot, D. Martin, P. Mouren, François Chevenet, A. Guenoche, et al.. PRODISTIN Web Site: a tool for the functional classification of proteins from interaction networks. Bioinformatics, Oxford University Press (OUP), 2006, 22, pp.248-250. <hal-00087767>
  • D.G. Biron, C. Brun, T. Lefevre, C. Lebarbenchon, H.D. Loxdale, et al.. The pitfalls of proteomics experiments without the correct use of bioinformatics tools.. Proteomics, Wiley-VCH Verlag, 2006, pp.6:5577-96. <hal-00310987>
  • François Chevenet, Christine Brun, Anne-Laure Bañuls, Bernard Jacq, Richard Christen. TreeDyn: towards dynamic graphics and annotations for analyses of trees.. BMC Bioinformatics, BioMed Central, 2006, 7, pp.439. <10.1186/1471-2105-7-439>. <hal-00321061>
  • François Chevenet, C. Brun, A.L. Banuls, B. Jacq, R. Christen. TreeDyn: towards dynamic graphics and annotations for analyses of trees.. BMC Bioinformatics, BioMed Central, 2006, pp.7: 439. <hal-00310985>
  • E. Formstecher, S. Aresta, V. Collura, A. Hamburger, A. Meil, et al.. Protein interaction mapping: a Drosophila case study. Genome Research, Cold Spring Harbor Laboratory Press, 2005, 15, pp.376-384. <hal-00118429>
  • E. Formstecher, S. Aresta, V. Collura, A. Hamburger, A. Meil, et al.. Protein interaction mapping: a Drosophila case study.. Genome Research, Cold Spring Harbor Laboratory Press, 2005, 15, pp.376-384. <hal-00310991>
  • David Martin, Christine Brun, Elisabeth Remy, Pierre Mouren, Denis Thieffry, et al.. GOToolBox: functional analysis of gene datasets based on Gene Ontology.. Genome Biology, BioMed Central, 2004, 5, pp.R101. <10.1186/gb-2004-5-12-r101>. <inserm-00095249>
  • A. Baudot, B. Jacq, C. Brun. A scale of functional divergence for yeast duplicated genes revealed from analysis of the protein-protein interaction network.. Genome Biology, BioMed Central, 2004, 5, pp.R76. <hal-00311016>
  • D. Martin, C. Brun, E. Remy, P. Mouren, B. Jacq, et al.. GOToolBox: functional analysis of gene datasets based on Gene Ontology.. Genome Biology, BioMed Central, 2004, 5, pp.R101. <hal-00311020>
  • H. Hermjakob, L. Montecchi-Palazzi, G. Bader, J. Wojcik, L. Salwinski, et al.. The HUPO PSI's molecular interaction format--a community standard for the representation of protein interaction data.. Nat Biotechnol, 2004, 22, pp.177-183. <hal-00311342>
  • C. Brun, François Chevenet, D. Martin, J. Wojcik, A. Guenoche, et al.. Functional classification of proteins for the prediction of cellular function from a protein-protein interaction network.. Genome Biology, BioMed Central, 2003, 5, pp.R6. <hal-00311029>
  • C. Brun, A. Guenoche, B. Jacq. Approach of the functional evolution of duplicated genes in Saccharomyces cerevisiae using a new classification method based on protein-protein interaction data.. J Struct Funct Genomics, 2003, 3, pp.213-224. <hal-00311032>

Chapitre d'ouvrage1 document

  • Olivier Gascuel, P. Benas, C. Brun, D. Burnouf, A. De Brevern, et al.. Modélisation des systèmes biologiques, bioinformatique. Rapport de conjoncture 2010 du Comité national de la recherche scientifique, CNRS Editions, chapitre 43, 845-858, 2011, ISBN 978-2-271-07263-4. <hal-00799641>