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Effect of Rap1 binding on DNA distortion and potassium permanganate hypersensitivity

Yann-Vaï Le Bihan , Béatrice Matot , Olivier Pietrement , M.J. Giraud-Panis , Sylvaine Gasparini , et al.
Acta crystallographica Section D : Structural biology [1993-..], 2013, 69 (3), pp.409-419. ⟨10.1107/S0907444912049311⟩
Article dans une revue istex hal-03013765v1

Measuring bacterial adaptation dynamics at the single-cell level using a microfluidic chemostat and time-lapse fluorescence microscopy

Zhicheng Long , Anne Olliver , Elisa Brambilla , Bianca Sclavi , Marco Cosentino Lagomarsino , et al.
Analyst, 2014, 139 (20), pp.5254-5262. ⟨10.1039/c4an00877d⟩
Article dans une revue hal-01528532v1

DnaA and LexA Proteins Regulate Transcription of the uvrB Gene in Escherichia coli: The Role of DnaA in the Control of the SOS Regulon

Wurihan Wurihan , Gezi Gezi , Elisa Brambilla , Shuwen Wang , Hongwei Sun , et al.
Frontiers in Microbiology, 2018, 9, ⟨10.3389/fmicb.2018.01212⟩
Article dans une revue hal-02111168v1

Temperature-dependence of the DnaA–DNA interaction and its effect on the autoregulation of dnaA expression

Chiara Saggioro , Anne Olliver , Bianca Sclavi
Biochemical Journal, 2013, 449 (2), pp.333-341. ⟨10.1042/BJ20120876⟩
Article dans une revue hal-03035324v1

The multiple roles of CRP at the complex acs promoter depend on activation region 2 and IHF.

Bianca Sclavi , Christine M Beatty , David S Thach , Christine E Fredericks , Malcolm Buckle , et al.
Molecular Microbiology, 2007, 65 (2), pp.425-40. ⟨10.1111/j.1365-2958.2007.05797.x⟩
Article dans une revue hal-00277524v1

DnaA and the timing of chromosome replication in Es-cherichia coli as a function of growth rate

Matthew Aa Grant , Chiara Saggioro , Ulisse Ferrari , Bruno Bassetti , Bianca Sclavi , et al.
BMC Systems Biology, 2011, 5 (1), ⟨10.1186/1752-0509-5-201⟩
Article dans une revue hal-01589012v1

Cooperative effects on the compaction of DNA fragments by the nucleoid protein H-NS and the crowding agent PEG probed by Magnetic Tweezers

M. Cristofalo , C.A. Marrano , D. Salerno , R. Corti , V. Cassina , et al.
Biochimica et Biophysica Acta (BBA) - General Subjects, 2020, 1864 (12), pp.129725. ⟨10.1016/j.bbagen.2020.129725⟩
Article dans une revue hal-03035306v1

Phage T4 early promoters are resistant to inhibition by the anti-sigma factor AsiA.

Gilbert Orsini , Sébastien Igonet , Carole Pène , Bianca Sclavi , Malcolm Buckle , et al.
Molecular Microbiology, 2004, 52 (4), pp.1013-28. ⟨10.1111/j.1365-2958.2004.04038.x⟩
Article dans une revue hal-00277452v1

Effect of Rap1 binding on DNA distortion and potassium permanganate hypersensitivity

Yann-Vaï Le Bihan , Béatrice Matot , Olivier Pietrement , Marie-Josèphe Giraud-Panis , Sylvaine Gasparini , et al.
Acta crystallographica Section D : Structural biology [1993-..], 2013, 69 (3), pp.409-419. ⟨10.1107/s0907444912049311⟩
Article dans une revue istex hal-03065181v1

Real-time characterization of intermediates in the pathway to open complex formation by Escherichia coli RNA polymerase at the T7A1 promoter.

Bianca Sclavi , Evgeny Zaychikov , Anastasia Rogozina , Ferdinand Walther , Malcolm Buckle , et al.
Proceedings of the National Academy of Sciences of the United States of America, 2005, 102 (13), pp.4706-11. ⟨10.1073/pnas.0408218102⟩
Article dans une revue hal-00257546v1

Gene silencing and large-scale domain structure of the E. coli genome

Mina Zarei , Bianca Sclavi , Marco Cosentino Lagomarsino
Molecular BioSystems, 2013, 9 (4), pp.758-767. ⟨10.1039/c3mb25364c⟩
Article dans une revue hal-01528422v1

CHAPTER 8. Transcription–Replication Conflicts, Resolution and Coregulation

Bianca Sclavi
Robert Landick; Terence Strick; Jue Wang. RNA Polymerases as Molecular Motors, 2, Royal Society of Chemistry, pp.176-195, 2021, Chemical Biology, ⟨10.1039/9781839160561-00176⟩
Chapitre d'ouvrage hal-03938560v1
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The nucleoid as a smart polymer

Vittore F. Scolari , Bianca Sclavi , Marco Cosentino Lagomarsino
Frontiers in Microbiology, 2015, 6, pp.UNSP 424. ⟨10.3389/fmicb.2015.00424⟩
Article dans une revue hal-01221224v1
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Multiple activities of the MatP protein are involved in post-replicative pairing of sister chromosomes in Escherichia coli

Estelle Crozat , Catherine Tardin , Maya Salhi , Philippe Rousseau , Armand Lablaine , et al.
2019
Pré-publication, Document de travail hal-02366115v1
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Direct single cell observation of a key E. coli cell cycle oscillator

Ilaria Iuliani , Gladys Mbemba , Marco Cosentino Lagomarsino , Bianca Sclavi
2023
Pré-publication, Document de travail hal-04310035v1
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Probing the solution structure of Factor H using hydroxyl radical protein footprinting and cross-linking

Anna Baud , Florence Gonnet , Isabelle Salard , Maxime Le Mignon , Alexandre Giuliani , et al.
Biochemical Journal, 2016, 473 (12), pp.1805-1819. ⟨10.1042/BCJ20160225⟩
Article dans une revue hal-01966773v1

Bacteriophage T4Dam DNA-(adenine-N(6))-methyltransferase. Comparison of pre-steady state and single turnover methylation of 40-mer duplexes containing two (un)modified target sites.

Ernst G Malygin , Bianca Sclavi , Victor V Zinoviev , Alexey A Evdokimov , Stanley Hattman , et al.
Journal of Biological Chemistry, 2004, 279 (48), pp.50012-8. ⟨10.1074/jbc.M409786200⟩
Article dans une revue hal-00277446v1

Study of bacteriophage T4-encoded Dam DNA (adenine-N6)-methyltransferase binding with substrates by rapid laser UV cross-linking.

Alexey A Evdokimov , Bianca Sclavi , Victor V Zinoviev , Ernst G Malygin , Stanley Hattman , et al.
Journal of Biological Chemistry, 2007, 282 (36), pp.26067-76. ⟨10.1074/jbc.M700866200⟩
Article dans une revue hal-00277435v1

Threshold accumulation of a constitutive protein explains E. coli cell-division behavior in nutrient upshifts

Mia Panlilio , Jacopo Grilli , Giorgio Tallarico , Ilaria Iuliani , Bianca Sclavi , et al.
Proceedings of the National Academy of Sciences of the United States of America, 2021, 118 (18), pp.e2016391118. ⟨10.1073/pnas.2016391118⟩
Article dans une revue hal-03357140v1
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DnaA-ATP acts as a molecular switch to control levels of ribonucleotide reductase expression in Escherichia coli.

Anne Olliver , Chiara Saggioro , John Herrick , Bianca Sclavi
Molecular Microbiology, 2010, 76 (6), pp.1555. ⟨10.1111/j.1365-2958.2010.07185.x⟩
Article dans une revue hal-00552635v1
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DNA melting by RNA polymerase at the T7A1 promoter precedes the rate-limiting step at 378C and results in the accumulation of an off-pathway intermediate

Anastasia Rogozina , Evgeny Zaychikov , Malcolm Buckle , Hermann Heumann , Bianca Sclavi
Nucleic Acids Research, 2009, pp.1 - 15. ⟨10.1093/nar/gkp560⟩
Article dans une revue hal-02374037v1

Gene clusters reflecting macrodomain structure respond to nucleoid perturbations

Vittore F. Scolari , Bruno Bassetti , Bianca Sclavi , Marco Cosentino Lagomarsino
Molecular BioSystems, 2011, 7 (3), pp.878 - 888. ⟨10.1039/c0mb00213e⟩
Article dans une revue hal-01589017v1
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Early fate of exogenous promoters in E. coli

Malikmohamed Yousuf , Ilaria Iuliani , Reshma T Veetil , Aswin Sai Narain Seshasayee , Bianca Sclavi , et al.
Nucleic Acids Research, 2020, 48 (5), pp.2348-2356. ⟨10.1093/nar/gkz1196⟩
Article dans une revue hal-02557129v1
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Subdiffusion of loci and cytoplasmic particles are different in compressed Escherichia coli cells

Shi Yu , Julian Sheats , Pietro Cicuta , Bianca Sclavi , Marco Cosentino Lagomarsino , et al.
Communications Biology, 2018, 1, pp.176. ⟨10.1038/s42003-018-0185-5⟩
Article dans une revue hal-01907457v1

Gene regulation by H-NS as a function of growth conditions depends on chromosomal position in Escherichia coli.

Bianca Sclavi , Elisa Brambilla
Article dans une revue hal-01230479v1

Ribonucleotide reductase and the regulation of DNA replication: an old story and an ancient heritage.

John Herrick , Bianca Sclavi
Molecular Microbiology, 2007, 63 (1), pp.22-34. ⟨10.1111/j.1365-2958.2006.05493.x⟩
Article dans une revue hal-00284818v1

Understanding the fundamental mechanisms of biofilms development and dispersal: BIAM (Biofilm Intensity and Architecture Measurement), a new tool for studying biofilms as a function of their architecture and fluorescence intensity

Marine Baudin , Bertrand Cinquin , Bianca Sclavi , Dominique Pareau , Filipa Lopes
Journal of Microbiological Methods, 2017, 140, pp.47 - 57. ⟨10.1016/j.mimet.2017.06.021⟩
Article dans une revue hal-01652538v1
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Rapid and accurate detection of Escherichia coli growth by fluorescent pH-sensitive organic nanoparticles for high-throughput screening applications.

Yang Si , Chloé Grazon , Gilles Clavier , Rieger Jutta , J.F. Audibert , et al.
Biosensors and Bioelectronics, 2016, 75, pp.320-327. ⟨10.1016/j.bios.2015.08.028⟩
Article dans une revue hal-01230475v1

Genome size variation and species diversity in salamanders

Bianca Sclavi , John Herrick
Journal of Evolutionary Biology, 2019, 32 (3), pp.278-286. ⟨10.1111/jeb.13412⟩
Article dans une revue hal-02111158v1

Differential methylation kinetics of individual target site strands by T4Dam DNA methyltransferase.

Victor V Zinoviev , Alexey A Evdokimov , Ernst G Malygin , Bianca Sclavi , Malcolm Buckle , et al.
Biological Chemistry, 2007, 388 (11), pp.1199-207. ⟨10.1515/BC.2007.142⟩
Article dans une revue istex hal-00277434v1