Bertrand Servin

Documents

Affiliations actuelles

Contact

Publications

	A meta-analysis of genetic and phenotypic diversity of European local pig breeds reveals genomic regions associated with breed differentiation for production traits Klavdija Poklukar , Camille Mestre , Martin Škrlep , Marjeta Čandek-Potokar , Cristina Ovilo Genetics Selection Evolution, 2023, 55 (1), pp.88. ⟨10.1186/s12711-023-00858-3⟩ Article dans une revue hal-04329951v1
	Comparison of genomic-enabled cross selection criteria for the improvement of inbred line breeding populations Alice Danguy Des Déserts , Nicolas Durand , Bertrand Servin , Ellen Goudemand-Dugué , Jean-Marc Alliot G3, 2023, 13 (11), ⟨10.1101/2023.03.17.533166⟩ Article dans une revue hal-04186221v1
	Two quantitative trait loci are associated with recapping of Varroa destructor ‐infested brood cells in Apis mellifera mellifera M. Guichard , B. Dainat , S. Eynard , Alain Vignal , Bertrand Servin Animal Genetics, 2022, 53 (1), pp.156-160. ⟨10.1111/age.13150⟩ Article dans une revue hal-03540810v1
	Reconstructing queen genotypes by pool sequencing colonies in eusocial insects: Statistical Methods and their application to honeybee Sonia E Eynard , Alain Vignal , Benjamin Basso , Kamila Canale‐tabet , Yves Le Conte Molecular Ecology Resources, 2022, 22 (8), pp.3035-3048. ⟨10.1111/1755-0998.13685⟩ Article dans une revue hal-03855231v1
	Complex population structure and haplotype patterns in the Western European honey bee from sequencing a large panel of haploid drones David Wragg , Sonia Eynard , Benjamin B. Basso , Kamila Canale-Tabet , Emmanuelle Labarthe Molecular Ecology Resources, 2022, 22 (8), pp.3068-3086. ⟨10.1111/1755-0998.13665⟩ Article dans une revue hal-03807491v1
	Genome‐wide analysis of hybridization in wild boar populations reveals adaptive introgression from domestic pig Nicolas Mary , Nathalie Iannuccelli , Geoffrey Petit , Nathalie Bonnet , Alain Pinton Evolutionary Applications, 2022, 15 (7), pp.1115-1128. ⟨10.1111/eva.13432⟩ Article dans une revue hal-03740011v1
	Analyse de l'hybridation dans les populations françaises de sangliers à l'aide de données de génotypage pangénomique Nicolas Mary , Nathalie Iannuccelli , Geoffrey Petit , Nathalie Bonnet , Alain Pinton Journées de la Recherche Porcine en France, 2021 Article dans une revue hal-03482640v1
	MOSAR -Méthodes et Outils pour la Sélection d'Abeilles Résistantes à Varroa Benjamin B. Basso , Sonia E. Eynard , Alain Vignal , Maxime Beguin , Anne-Laure Guirao Innovations Agronomiques, 2021, 82, pp.229-245. ⟨10.15454/zna6-4g12⟩ Article dans une revue hal-03159732v1
	Evolution of recombination landscapes in diverging populations of bread wheat Alice Danguy Des Déserts , Sophie Bouchet , Pierre Sourdille , Bertrand Servin Genome Biology and Evolution, 2021, 13 (8), ⟨10.1093/gbe/evab152⟩ Article dans une revue hal-03290674v1
	Gene Banks as Reservoirs to Detect Recent Selection: The Example of the Asturiana de los Valles Bovine Breed Simon Boitard , Cyriel Paris , Natalia Sevane , Bertrand Servin , Kenza Bazi-Kabbaj Frontiers in Genetics, 2021, 12, ⟨10.3389/fgene.2021.575405⟩ Article dans une revue hal-03357162v1
	Local adaptations of Mediterranean sheep and goats through an integrative approach Bruno Serranito , Marco Cavalazzi , Pablo Vidal , Dominique Taurisson-Mouret , Elena Ciani Scientific Reports, 2021, 11, pp.21363. ⟨10.1038/s41598-021-00682-z⟩ Article dans une revue hal-03421679v1
	Identification of quantitative trait loci associated with calmness and gentleness in honey bees using whole‐genome sequences Matthieu Guichard , Benjamin Dainat , Sonia Eynard , Alain Vignal , Bertrand Servin Animal Genetics, 2021, pp.13070. ⟨10.1111/age.13070⟩ Article dans une revue hal-03252574v1
	Genomic Uniqueness of Local Sheep Breeds From Morocco Abdessamad Ouhrouch , Simon Boitard , Frédéric Boyer , Bertrand Servin , Anne da Silva Frontiers in Genetics, 2021, 12, 13 p. ⟨10.3389/fgene.2021.723599⟩ Article dans une revue hal-03591256v1
	Descriptive analysis of the varroa non-reproduction trait in honey bee colonies and association with other traits related to varroa resistance Sonia E. Eynard , Christina Sann , Benjamin Basso , Anne-Laure Guirao , Yves Le Conte Insects, 2020, 11 (8), pp.1-16. ⟨10.3390/insects11080492⟩ Article dans une revue hal-02937567v1
	Evaluation of Suppressed Mite Reproduction (SMR) Reveals Potential for Varroa Resistance in European Honey Bees (Apis mellifera L.) Fanny Mondet , Melanie Parejo , Marina Meixner , Cecilia Costa , Per Kryger Insects, 2020, 11 (9), pp.595. ⟨10.3390/insects11090595⟩ Article dans une revue hal-02933234v1
	Genetic diversity analysis of French goat populations reveals selective sweeps involved in their differentiation Claire Oget , Bertrand Servin , Isabelle Palhiere Animal Genetics, 2019, 50 (1), pp.54-63. ⟨10.1111/age.12752⟩ Article dans une revue hal-02624348v1
	Inference of Selection from Genetic Time Series Using Various Parametric Approximations to the Wright-Fisher Model Cyriel Paris , Bertrand Servin , Simon Boitard G3, 2019, 9 (12), pp.4073-4086. ⟨10.1534/g3.119.400778⟩ Article dans une revue hal-02624801v1
	Meta-analysis of genome-wide association studies for cattle stature identifies common genes that regulate body size in mammals Aniek C. Bouwman , Hans D. Daetwyler , Amanda J. Chamberlain , Carla Hurtado Ponce , Mehdi Sargolzaei Nature Genetics, 2018, 50 (3), pp.362-367. ⟨10.1038/s41588-018-0056-5⟩ Article dans une revue hal-02628780v1
	Genome-wide SNP profiling of worldwide goat populations reveals strong partitioning of diversity and highlights post-domestication migration routes Licia Colli , Marco Milanesi , Andrea Talenti , Francesca Bertolini , Minhui Chen Genetics Selection Evolution, 2018, 50 (1), pp.58. ⟨10.1186/s12711-018-0422-x⟩ Article dans une revue hal-02405280v1
	Convergent genomic signatures of domestication in sheep and goats Florian Alberto , Frédéric Boyer , Pablo Orozco-Terwengel , Ian Streeter , Bertrand Servin Nature Communications, 2018, 9 (1), pp.813. ⟨10.1038/s41467-018-03206-y⟩ Article dans une revue cea-01875703v1
	Signatures of selection and environmental adaptation across the goat genome post-domestication Francesca Bertolini , Bertrand Servin , Andrea Talenti , Estelle Rochat , Eui Soo Kim Genetics Selection Evolution, 2018, 50 (1), pp.57. ⟨10.1186/s12711-018-0421-y⟩ Article dans une revue hal-02405277v1
	Revealing the selection history of adaptive loci using genome-wide scans for selection: an example from domestic sheep Christina Rochus , Flavie Tortereau , Florence Plisson-Petit , Gwendal Restoux , Carole Moreno-Romieux BMC Genomics, 2018, 19 (1), pp.Non Paginé. ⟨10.1186/s12864-018-4447-x⟩ Article dans une revue hal-02626935v1
	Variation in Recombination Rate and Its Genetic Determinism in Sheep Populations Morgane Petit , Jean-Michel Astruc , Julien Sarry , Laurence Drouilhet , Stéphane Fabre Genetics, 2017, 207 (2), pp.767-784. ⟨10.1534/genetics.117.300123⟩ Article dans une revue hal-02624341v1
	Development of a SNP panel dedicated to parentage assignment in French sheep populations Flavie Tortereau , Carole Moreno-Romieux , Gwenola Tosser-Klopp , Bertrand Servin , Jérôme Raoul BMC Genetics, 2017, 18 (1), Non paginé. ⟨10.1186/s12863-017-0518-2⟩ Article dans une revue hal-01605129v1
	High-Resolution Mapping of Crossover Events in the Hexaploid Wheat Genome Suggests a Universal Recombination Mechanism Benoît Darrier , Hélène Rimbert , François Balfourier , Lise Pingault , Ambre-Aurore Josselin Genetics, 2017, 206 (3), pp.1373-1388. ⟨10.1534/genetics.116.196014⟩ Article dans une revue hal-01608797v1
	Genome-Wide Identification of the Mutation Underlying Fleece Variation and Discriminating Ancestral Hairy Species from Modern Woolly Sheep Julie Demars , Margarita Cano , Laurence Drouilhet , Florence Plisson-Petit , Philippe Bardou Molecular Biology and Evolution, 2017, 34 (7), pp.1722-1729. ⟨10.1093/molbev/msx114⟩ Article dans une revue hal-01608205v1
	Uncovering Adaptation from Sequence Data : Lessons from Genome Resequencing of Four Cattle Breeds Simon Boitard , Mekki Boussaha , Aurelien Capitan , Dominique Rocha , Bertrand Servin Genetics, 2016, 203 (1), pp.433-450. ⟨10.1534/genetics.115.181594⟩ Article dans une revue hal-01533825v1
	Genome-wide association study and biological pathway analysis of the Eimeria maxima response in broilers Edin Hamzić , Bart Buitenhuis , Frédéric Hérault , Rachel Hawken , Mitchel S. Abrahamsen Genetics Selection Evolution, 2015, 47 (1), pp.91. ⟨10.1186/s12711-015-0170-0⟩ Article dans une revue hal-01341325v1
	Spatio-temporal gene expression profiling during in vivo early ovarian folliculogenesis: integrated transcriptomic study and molecular signature of early follicular growth Agnès Bonnet , Bertrand Servin , Philippe Mulsant , Béatrice Mandon-Pepin PLoS ONE, 2015, 5 (November), pp.1-25. ⟨10.1371/journal.pone.0141482⟩ Article dans une revue hal-02634306v1
	Genome Scan for Selection in Structured Layer Chicken Populations Exploiting Linkage Disequilibrium Information Mahmood Gholami , Christian Reimer , Malena Erbe , Rudolf Preisinger , Annett Weigend PLoS ONE, 2015, 10 (7), pp.1-15. ⟨10.1371/journal.pone.0130497⟩ Article dans une revue hal-02631302v1
	Large-scale investigation of response to [i]Eimeria Maxima[/i] challenge in broilers Edin Hamzic , Bertrand Bed'Hom , Herve Juin , R Hawken , M. S. Abrahamsen Journal of Animal Science, 2015, 93 (4), pp.1830-1840. ⟨10.2527/jas2014-8592⟩ Article dans une revue hal-01194093v1
	Combined QTL and selective sweep mappings with coding SNP annotation and cis-eQTL analysis revealed PARK2 and JAG2 as new candidate genes for adiposity regulation. Pierre-François Roux , Simon Boitard , Anne Blum , Brian Parks , Alexandra Montagner G3, 2015, 5, pp.517-529. ⟨10.1534/g3.115.016865⟩ Article dans une revue hal-01194040v1
	A genome-wide association study of production traits in a commercial population of Large White pigs: evidence of haplotypes affecting meat quality Marie-Pierre Sanchez , Thierry Tribout , Nathalie Iannuccelli , Marcel Bouffaud , Bertrand Servin Genetics Selection Evolution, 2014, 46 (1), pp.1-12. ⟨10.1186/1297-9686-46-12⟩ Article dans une revue hal-01193779v1
	Selection signatures in worldwide sheep populations María Inés Fariello , Bertrand Servin , Gwenola Tosser-Klopp , Rachel Rupp , Carole Moreno-Romieux Moreno PLoS ONE, 2014, 9 (8), pp.1-12. ⟨10.1371/journal.pone.0103813⟩ Article dans une revue hal-02640427v1
	The sheep genome illuminates biology of the rumen and lipid metabolism Yu Jiang , Min Xie , Wenbin Chen , Richard Talbot , Jillian F. Maddox Science, 2014, 344 (6188), pp.1168-1173. ⟨10.1126/science.1252806⟩ Article dans une revue hal-02635391v1
	Transcriptome-wide investigation of genomic imprinting in chicken Laure Fresard , Sophie Leroux , Bertrand Servin , David Gourichon , Patrice Dehais Nucleic Acids Research, 2014, 42 (6), pp.3768-3782. ⟨10.1093/nar/gkt1390⟩ Article dans une revue hal-01019569v1
	An update of the goat genome assembly using dense radiation hybrid maps allows detailed analysis of evolutionary rearrangements in Bovidae Xiaoyong Du , Bertrand Servin , James E. Womack , Jianhua Cao , Mei Yu BMC Genomics, 2014, 15, ⟨10.1186/1471-2164-15-625⟩ Article dans une revue hal-02631615v1
	Evolutionary origin of Bone Morphogenetic Protein 15 and growth and differentiation factor 9 and differential selective pressure between mono- and polyovulating species Olivier Monestier , Bertrand Servin , Sylvain Auclair , Thomas Bourquard , Anne Poupon Biology of Reproduction, 2014, 91 (4), pp.1-13. ⟨10.1095/biolreprod.114.119735⟩ Article dans une revue hal-01129871v1
	A genome-wide association study points out the causal implication of SOX9 in the sex-reversal phenotype in XX pigs Sarah Rousseau Rousseau , Nathalie N. Iannuccelli , Marie-Jose Mercat-Gernigon Mercat , Claire Naylies , Jean-Claude J.-C. Thouly PLoS ONE, 2013, 8 (11), pp.1-11. ⟨10.1371/journal.pone.0079882⟩ Article dans une revue hal-01004777v1
	Detecting signatures of selection through haplotype differentiation among hierarchically structured populations. María Inés Fariello , Simon Boitard , Hugo Naya , Magali San Cristobal , Bertrand Servin Genetics, 2013, 193 (3), pp.929-41. ⟨10.1534/genetics.112.147231⟩ Article dans une revue hal-00842696v1
	Sequencing and automated whole-genome optical mapping of the genome of a domestic goat (Capra hircus) Yang Dong , Min Xie , Yu Jiang , Nianqing Xiao , Xiaoyong Du Nature Biotechnology, 2013, 31 (2), pp.135-141. ⟨10.1038/nbt.2478⟩ Article dans une revue hal-02651460v1
	Adaptation of maize to temperate climates: mid-density genome-wide association genetics and diversity patterns reveal key genomic regions, with a major contribution of the Vgt2 (ZCN8) locus Sophie Bouchet , Bertrand Servin , Pascal Bertin , Delphine D. Madur , Valerie V. Combes PLoS ONE, 2013, 8 (8), ⟨10.1371/journal.pone.0071377⟩ Article dans une revue hal-02652500v1
	Fine mapping of complex traits in non-model species: using next generation sequencing and advanced intercross lines in Japanese quail Laure Fresard , Sophie Leroux , Patrice Dehais , Bertrand Servin , Hélène Gilbert BMC Genomics, 2012, 13, online (october), Non paginé. ⟨10.1186/1471-2164-13-551⟩ Article dans une revue hal-01129669v1
	Genome-wide analysis of the world’s sheep breeds reveals high levels of historic mixture and strong recent selection James W. Kijas , Johannes A. Lenstra , Ben Hayes , Simon S. Boitard , Laercio R. Porto Neto PLoS Biology, 2012, 10, online (2), Non paginé. ⟨10.1371/journal.pbio.1001258⟩ Article dans une revue hal-02652546v1
	High-resolution autosomal radiation hybrid maps of the pig genome and their contribution to the genome sequence assembly Bertrand Servin , Thomas Faraut , Nathalie N. Iannuccelli , Diana Zelenika , Denis Milan BMC Genomics, 2012, 13, online (november), Non paginé. ⟨10.1186/1471-2164-13-585⟩ Article dans une revue hal-02644217v1
	Analyses of pig genomes provide insight into porcine demography and evolution Martien A. M. Groenen , Alan L. Archibald , Hirohide Uenishi , Christopher K. Tuggle , Yasuhiro Takeuchi Nature, 2012, 491 (7426), pp.393-398. ⟨10.1038/nature11622⟩ Article dans une revue cea-00880676v1
	A high density recombination map of the pig reveals a correlation between sex-specific recombination and GC content Flavie Tortereau , Bertrand Servin , Laurent Frantz , Hendrik-Jan Megens , Denis Milan BMC Genomics, 2012, 13, online (november), Non paginé. ⟨10.1186/1471-2164-13-586⟩ Article dans une revue hal-02646895v1
	A locally congenic backcross design in pig: a new regional fine QTL mapping approach miming congenic strains used in mouse Juliette Riquet , Hélène Gilbert , Bertrand Servin , Marie-Pierre Sanchez , Nathalie N. Iannuccelli BMC Genetics, 2011, 12, online (january), pp.1-9. ⟨10.1186/1471-2156-12-6⟩ Article dans une revue hal-01000531v1
	Detecting selection in population trees: the Lewontin and Krakauer test extended. Maxime Bonhomme , Claude Chevalet , Bertrand Servin , Simon Boitard , Jihad Abdallah Genetics, 2010, 186 (1), pp.241-62. ⟨10.1534/genetics.104.117275⟩ Article dans une revue hal-00842515v1
	Statistical confidence measures for genome maps: application to the validation of genome assemblies Bertrand Servin , Simon de Givry , Thomas Faraut Bioinformatics, 2010, 26 (24), pp.3035-3042. ⟨10.1093/bioinformatics/btq598⟩ Article dans une revue hal-02665786v1
	Detecting Selection in Population Trees: The Lewontin and Krakauer Test Extended Maxime Bonhomme , Claude C. Chevalet , Bertrand Servin , Simon S. Boitard , Jihad Abdallah Genetics, 2010, 186 (1), pp.241-262. ⟨10.1534/genetics.110.117275⟩ Article dans une revue hal-02655907v1
	Genetic variability and linkage disequilibrium patterns in the bovine DNAJA1 gene Amandine Marty , Yves Amigues , Bertrand Servin , Gilles Renand , Hubert H. Levéziel Molecular Biotechnology, 2010, 44 (3), pp.190-197. ⟨10.1007/s12033-009-9228-y⟩ Article dans une revue hal-01193442v1
	Contribution of Radiation Hybrids to Genome Mapping in Domestic Animals. Thomas Faraut , Simon de Givry , Christophe Hitte , Yvette Lahbib Mansais , Mireille Morisson Cytogenetic and Genome Research, 2009, 126 (1-2), pp.21-33. ⟨10.1159/000245904⟩ Article dans une revue inserm-00442389v1
	Genome sequence of the -rhizobium Cupriavidus taiwanensis and comparative genomics of rhizobia Claire Amadou , Géraldine Pascal , Sophie Mangenot , Michelle Glew , Cyril Bontemps Genome Research, 2008, 18 (9), pp.1472 - 1483. ⟨10.1101/gr.076448.108⟩ Article dans une revue hal-01655676v1
	Imputation-based analysis of association studies: candidate regions and quantitative traits Bertrand Servin , Matthew Stephens PLoS Genetics, 2007, 3, pp.1296-1308. ⟨10.1371/journal.pgen.0030114⟩ Article dans une revue hal-02662573v1
	Toward a Theory of Marker-Assisted Gene Pyramiding Bertrand Servin , Olivier C. Martin , Marc Mézard , Frédéric Hospital Genetics, 2004, 168, pp.513-523. ⟨10.1534/genetics.103.023358⟩ Article dans une revue hal-00009229v1
	Marker-assisted introgression of five QTLs controlling fruit quality traits into three tomato lines revealed interactions between QTLs and genetic backgrounds L. Lecomte , Philippe Duffe , Michel Buret , Bertrand Servin , Frederic F. Hospital TAG Theoretical and Applied Genetics, 2004, 109, pp.658-668. ⟨10.1007/s00122-004-1674-0⟩ Article dans une revue hal-02675933v1
	Marker-assisted introgression of 4 Phytophthora capsici resistance QTL alleles into a bell pepper line: validation of additive and epistatic effects A. Thabuis , Alain Palloix , Bertrand Servin , A.M. Daubèze , Patrick Signoret Molecular Breeding, 2004, 14, pp.9-20 Article dans une revue hal-02671845v1

	Sequence-based genome-wide association studies reveal the polygenic architecture of Varroa destructor resistance in Western honey bees Apis mellifera Sonia Eynard , Fanny Mondet , Benjamin Basso , Olivier Bouchez , Tabatha Bulach 2024 Pré-publication, Document de travail hal-04493727v1
	The black honey bee genome: insights on specific structural elements and a first step towards pan-genomes Sonia Eynard , Christophe Klopp , Kamila Canale-Tabet , William Marande , Céline Vandecasteele 2024 Pré-publication, Document de travail hal-04473386v1
	Multiple adaptive solutions to face climatic constraints: novel insights in the debate over the role of convergence in local adaptation Badr Benjelloun , Kevin Leempoel , Frédéric Boyer , Sylvie Stucki , Ian Streeter 2023 Pré-publication, Document de travail hal-04186277v1
	Sex-differences in the genetic architecture of individual recombination rates in wild house sparrows ( Passer domesticus ) John Mcauley , Bertrand Servin , Lucy Peters , Ingerid Hagen , Alina Niskanen 2023 Pré-publication, Document de travail hal-04186240v1
	Discovering genomic regions associated with the phenotypic differentiation of European local pig breeds Klavdija Poklukar , Camille Mestre , Martin Škrlep , Marjeta Čandek-Potokar , Cristina Ovilo 2023 Pré-publication, Document de travail hal-04186069v1
	From group to individual - Genotyping by pool sequencing eusocial colonies Sonia Eynard , Alain Vignal , Benjamin B. Basso , Lucie Genestout , Yves Le Conte 2021 Pré-publication, Document de travail hal-03482633v1
	Complex population structure and haplotype patterns in Western Europe honey bee from sequencing a large panel of haploid drones David Wragg , Sonia E Eynard , Benjamin B. Basso , Kamila Canale-Tabet , Emmanuelle Labarthe 2021 Pré-publication, Document de travail hal-03482707v1
	Evolution of recombination landscapes in diverging populations of bread wheat Alice Danguy Des Déserts , Sophie Bouchet , Pierre Sourdille , Bertrand Servin 2021 Pré-publication, Document de travail hal-03244446v1
	Variation in recombination rate and its genetic determinism in sheep ( Ovis Aries ) populations from combining multiple genome-wide datasets Morgane Petit , Jean-Michel Astruc , Julien Sarry , Laurence Drouilhet , Stéphane Fabre 2017 Pré-publication, Document de travail hal-02936802v1

	Contributions à la modélisation statistique de données génétiques Bertrand Servin Génétique. Université de Toulouse, 2020 HDR tel-02960389v1

	compareHMM Cyriel Paris , Bertrand Servin , Simon Boitard 2019 Logiciel hal-02920484v1
	hapflk Bertrand Servin , Simon S. Boitard , Maria Inès M. I. Fariello Rico 2013 Logiciel hal-02803185v1

Bertrand Servin

Publications

A meta-analysis of genetic and phenotypic diversity of European local pig breeds reveals genomic regions associated with breed differentiation for production traits

Comparison of genomic-enabled cross selection criteria for the improvement of inbred line breeding populations

Two quantitative trait loci are associated with recapping of Varroa destructor ‐infested brood cells in Apis mellifera mellifera

Reconstructing queen genotypes by pool sequencing colonies in eusocial insects: Statistical Methods and their application to honeybee

Complex population structure and haplotype patterns in the Western European honey bee from sequencing a large panel of haploid drones

Genome‐wide analysis of hybridization in wild boar populations reveals adaptive introgression from domestic pig

Analyse de l'hybridation dans les populations françaises de sangliers à l'aide de données de génotypage pangénomique

MOSAR -Méthodes et Outils pour la Sélection d'Abeilles Résistantes à Varroa

Evolution of recombination landscapes in diverging populations of bread wheat

Gene Banks as Reservoirs to Detect Recent Selection: The Example of the Asturiana de los Valles Bovine Breed

Local adaptations of Mediterranean sheep and goats through an integrative approach

Identification of quantitative trait loci associated with calmness and gentleness in honey bees using whole‐genome sequences

Genomic Uniqueness of Local Sheep Breeds From Morocco

Descriptive analysis of the varroa non-reproduction trait in honey bee colonies and association with other traits related to varroa resistance

Evaluation of Suppressed Mite Reproduction (SMR) Reveals Potential for Varroa Resistance in European Honey Bees (Apis mellifera L.)

Genetic diversity analysis of French goat populations reveals selective sweeps involved in their differentiation

Inference of Selection from Genetic Time Series Using Various Parametric Approximations to the Wright-Fisher Model

Meta-analysis of genome-wide association studies for cattle stature identifies common genes that regulate body size in mammals

Genome-wide SNP profiling of worldwide goat populations reveals strong partitioning of diversity and highlights post-domestication migration routes

Convergent genomic signatures of domestication in sheep and goats

Signatures of selection and environmental adaptation across the goat genome post-domestication

Revealing the selection history of adaptive loci using genome-wide scans for selection: an example from domestic sheep

Variation in Recombination Rate and Its Genetic Determinism in Sheep Populations

Development of a SNP panel dedicated to parentage assignment in French sheep populations

High-Resolution Mapping of Crossover Events in the Hexaploid Wheat Genome Suggests a Universal Recombination Mechanism

Genome-Wide Identification of the Mutation Underlying Fleece Variation and Discriminating Ancestral Hairy Species from Modern Woolly Sheep

Uncovering Adaptation from Sequence Data : Lessons from Genome Resequencing of Four Cattle Breeds

Genome-wide association study and biological pathway analysis of the Eimeria maxima response in broilers

Spatio-temporal gene expression profiling during in vivo early ovarian folliculogenesis: integrated transcriptomic study and molecular signature of early follicular growth

Genome Scan for Selection in Structured Layer Chicken Populations Exploiting Linkage Disequilibrium Information

Large-scale investigation of response to [i]Eimeria Maxima[/i] challenge in broilers

Combined QTL and selective sweep mappings with coding SNP annotation and cis-eQTL analysis revealed PARK2 and JAG2 as new candidate genes for adiposity regulation.

A genome-wide association study of production traits in a commercial population of Large White pigs: evidence of haplotypes affecting meat quality

Selection signatures in worldwide sheep populations

The sheep genome illuminates biology of the rumen and lipid metabolism

Transcriptome-wide investigation of genomic imprinting in chicken

An update of the goat genome assembly using dense radiation hybrid maps allows detailed analysis of evolutionary rearrangements in Bovidae

Evolutionary origin of Bone Morphogenetic Protein 15 and growth and differentiation factor 9 and differential selective pressure between mono- and polyovulating species

A genome-wide association study points out the causal implication of SOX9 in the sex-reversal phenotype in XX pigs

Detecting signatures of selection through haplotype differentiation among hierarchically structured populations.

Sequencing and automated whole-genome optical mapping of the genome of a domestic goat (Capra hircus)

Adaptation of maize to temperate climates: mid-density genome-wide association genetics and diversity patterns reveal key genomic regions, with a major contribution of the Vgt2 (ZCN8) locus

Fine mapping of complex traits in non-model species: using next generation sequencing and advanced intercross lines in Japanese quail

Genome-wide analysis of the world’s sheep breeds reveals high levels of historic mixture and strong recent selection

High-resolution autosomal radiation hybrid maps of the pig genome and their contribution to the genome sequence assembly

Analyses of pig genomes provide insight into porcine demography and evolution

A high density recombination map of the pig reveals a correlation between sex-specific recombination and GC content

A locally congenic backcross design in pig: a new regional fine QTL mapping approach miming congenic strains used in mouse

Detecting selection in population trees: the Lewontin and Krakauer test extended.

Statistical confidence measures for genome maps: application to the validation of genome assemblies

Detecting Selection in Population Trees: The Lewontin and Krakauer Test Extended

Genetic variability and linkage disequilibrium patterns in the bovine DNAJA1 gene

Contribution of Radiation Hybrids to Genome Mapping in Domestic Animals.

Genome sequence of the -rhizobium Cupriavidus taiwanensis and comparative genomics of rhizobia

Imputation-based analysis of association studies: candidate regions and quantitative traits

Toward a Theory of Marker-Assisted Gene Pyramiding

Marker-assisted introgression of five QTLs controlling fruit quality traits into three tomato lines revealed interactions between QTLs and genetic backgrounds

Marker-assisted introgression of 4 Phytophthora capsici resistance QTL alleles into a bell pepper line: validation of additive and epistatic effects

Sequence-based genome-wide association studies reveal the polygenic architecture of Varroa destructor resistance in Western honey bees Apis mellifera

The black honey bee genome: insights on specific structural elements and a first step towards pan-genomes

Multiple adaptive solutions to face climatic constraints: novel insights in the debate over the role of convergence in local adaptation

Sex-differences in the genetic architecture of individual recombination rates in wild house sparrows ( Passer domesticus )

Discovering genomic regions associated with the phenotypic differentiation of European local pig breeds

From group to individual - Genotyping by pool sequencing eusocial colonies

Complex population structure and haplotype patterns in Western Europe honey bee from sequencing a large panel of haploid drones

Evolution of recombination landscapes in diverging populations of bread wheat

Variation in recombination rate and its genetic determinism in sheep ( Ovis Aries ) populations from combining multiple genome-wide datasets

Contributions à la modélisation statistique de données génétiques

compareHMM

hapflk