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Independent set reconfiguration: general and RNA-focused parameterized algorithms
Théo Boury
,
Laurent Bulteau
,
Bertrand Marchand
,
Yann Ponty
2023
Pré-publication, Document de travail
hal-04094405v1
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Designing molecular RNA switches with Restricted Boltzmann machines
Jorge Fernandez-De-Cossio-Diaz
,
Pierre Hardouin
,
Francois-Xavier Lyonnet Du Moutier
,
Andrea Di Gioacchino
,
Bertrand Marchand
,
et al.
2023
Pré-publication, Document de travail
hal-04294884v1
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Tree Diet: Reducing the Treewidth to Unlock FPT Algorithms in RNA Bioinformatics
Bertrand Marchand
,
Yann Ponty
,
Laurent Bulteau
WABI 2021 - 21st Workshop on Algorithms in Bioinformatics, 2021, Paris, France
Communication dans un congrès
hal-03206132v1
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Automated design of dynamic programming schemes for RNA folding with pseudoknots
Bertrand Marchand
,
Sebastian Will
,
Sarah Berkemer
,
Yann Ponty
,
Laurent Bulteau
Article dans une revue
hal-04103565v1
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Tree Diet: Reducing the Treewidth to Unlock FPT Algorithms in RNA Bioinformatics
Bertrand Marchand
,
Yann Ponty
,
Laurent Bulteau
Article dans une revue
hal-03608412v2
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Infrared: a declarative tree decomposition-powered framework for bioinformatics
Hua-Ting Yao
,
Bertrand Marchand
,
Sarah J. Berkemer
,
Yann Ponty
,
Sebastian Will
Article dans une revue
hal-04211173v2
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Automated design of dynamic programming schemes for RNA folding with pseudoknots
Bertrand Marchand
,
Sebastian Will
,
Sarah Berkemer
,
Laurent Bulteau
,
Yann Ponty
WABI 2022 - 22nd Workshop on Algorithms in Bioinformatics, Sep 2022, Potsdam, Germany
Communication dans un congrès
hal-03676377v2
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