Identifiants chercheur

Nombre de documents

42

Bertrand Aigle


Article dans une revue29 documents

  • Mabrouka Benhadj, Djamila Gacemi-Kirane, Maxime Toussaint, Laurence Hotel, Cyril Bontemps, et al.. Diversity and antimicrobial activities of Streptomyces isolates from Fetzara Lake, north eastern Algeria. Annales de Biologie Clinique, John Libbey Eurotext, 2018, 76 (1), pp.81-95. 〈10.1684/abc.2017.1316〉. 〈hal-01844922〉
  • Aurélie Deveau, Harald Gross, Béatrice Palin, Samina Mehnaz, Max Schnepf, et al.. Role of secondary metabolites in the interaction between Pseudomonas fluorescensand soil microorganisms under iron-limited conditions. FEMS Microbiology Ecology, 2016, 92 (8), pp.1-11. 〈10.1093/femsec/fiw107〉. 〈hal-01490770〉
  • Mingxun Wang, Jeremy J. Carver, Vanessa V. Phelan, Laura M. Sanchez, Neha Garg, et al.. Sharing and community curation of mass spectrometry data with Global Natural Products Social Molecular Networking. Nature Biotechnology, Nature Publishing Group, 2016, 34 (8), pp.828-837. 〈10.1038/nbt.3597〉. 〈hal-01371824〉
  • Annabelle Thibessard, Drago Haas, Claude Gerbaud, Bertrand Aigle, Sylvie Lautru, et al.. Complete genome sequence of Streptomyces ambofaciens ATCC 23877, the spiramycin producer. Journal of Biotechnology, Elsevier, 2015, 214, pp.117-118. 〈http://www.sciencedirect.com/science/article/pii/S0168165615301267〉. 〈10.1016/j.jbiotec.2015.09.020〉. 〈hal-01258341〉
  • Justine Galet, Aurélie Deveau, Laurence Hotel, Pascale Frey-Klett, Pierre Leblond, et al.. Pseudomonas fluorescens Pirates both Ferrioxamine and Ferricoelichelin Siderophores from Streptomyces ambofaciens.. Applied and Environmental Microbiology, American Society for Microbiology, 2015, 81 (9), pp.3132-3141. 〈http://aem.asm.org/content/early/2015/02/23/AEM.03520-14.abstract〉. 〈10.1128/AEM.03520-14〉. 〈hal-01269032〉
  • Bin Wang, Fang Fan, Jinwei Ren, Guomin Ai, Bertrand Aigle, et al.. Identification of Alp1U and Lom6 as epoxy hydrolases and implications for kinamycin and lomaiviticin biosynthesis. Nature Communications, Nature Publishing Group, 2015, 6, 〈http://www.nature.com/articles/ncomms8674〉. 〈10.1038/ncomms8674〉. 〈hal-01475795〉
  • Bin Wang, Jinwei Ren, Liyuan Li, Fang Fan, Guohui Pan, et al.. Kinamycin biosynthesis employs a conserved pair of oxidases for B-ring contraction. Chemical Communications, Royal Society of Chemistry, 2015, 51 (42), pp.8845 - 8848. 〈http://pubs.rsc.org/en/Content/ArticleLanding/2015/CC/c5cc01986a#!divAbstract〉. 〈10.1039/c5cc01986a〉. 〈hal-01475728〉
  • Marnix H Medema, Renzo Kottmann, Yi Yilmaz, Matthew Cummings, John B Biggins, et al.. Minimum Information about a Biosynthetic Gene cluster.. Nature Chemical Biology, Nature Publishing Group, 2015, 11 (9), pp.625-31. 〈10.1038/nchembio.1890〉. 〈hal-01430728〉
  • Justine Galet, Aurélie Deveau, Laurence Hotel, Pierre Leblond, Pascale Frey-Klett, et al.. Gluconic acid-producing Pseudomonas sp. prevent γ-actinorhodin biosynthesis by Streptomyces coelicolor A3(2). Archives of Microbiology, Springer Verlag, 2014, 196 (9), pp.619-627. 〈http://link.springer.com/article/10.1007%2Fs00203-014-1000-4〉. 〈10.1007/s00203-014-1000-4〉. 〈hal-01268576〉
  • Lijiang Song, Luisa Laureti, Christophe Corre, Pierre Leblond, Bertrand Aigle, et al.. Cytochrome P450-mediated hydroxylation is required for polyketide macrolactonization in stambomycin biosynthesis. Journal of Antibiotics, Nature Publishing Group: Open Access Hybrid Model Option B, 2014, 67 (1), pp.71 - 76. 〈10.1038/ja.2013.119〉. 〈hal-01474997〉
  • Bertrand Aigle, Sylvie Lautru, Dieter Spiteller, Jeroen S. Dickschat, Gregory L. Challis, et al.. Genome mining of Streptomyces ambofaciens. Journal of Industrial Microbiology and Biotechnology, Springer Verlag, 2014, 41 (2), pp.251 - 263. 〈http://link.springer.com/article/10.1007/s10295-013-1379-y〉. 〈10.1007/s10295-013-1379-y〉. 〈hal-01475037〉
  • Robert Bunet, Ramona Riclea, Luisa Laureti, Laurence Hotel, Cedric Paris, et al.. A Single Sfp-Type Phosphopantetheinyl Transferase Plays a Major Role in the Biosynthesis of PKS and NRPS Derived Metabolites in Streptomyces ambofaciens ATCC23877. PLoS ONE, Public Library of Science, 2014, 9 (1), pp.e87607. 〈10.1371/journal.pone.0087607〉. 〈hal-01272916〉
  • S. Song, L Laureti, P Gomez-Escribano, D Fox, V Yeo, et al.. Bacterial genome mining for novel natural product discovery. Planta Medica, Georg Thieme Verlag, 2012, 78 (11), 〈10.1055/s-0032-1320194〉. 〈hal-01667347〉
  • R. Bunet, L. Song, M. Vaz Mendez, C. Corre, L. Hotel, et al.. Characterization and manipulation of the pathway-specific late regulator AlpW reveals Streptomyces ambofaciens as a new producer of kinamycins. Journal of Bacteriology, American Society for Microbiology, 2011, 193 ((5)), pp. 1142-1153. 〈10.1128/JB.01269-10〉. 〈hal-00606766〉
  • Samiha Sioud, Bertrand Aigle, Ines Karray-Rebai, Slim Smaoui, Samir Bejar, et al.. Integrative Gene Cloning and Expression System for Streptomyces sp. US 24 and Streptomyces sp. TN 58 Bioactive Molecule Producing Strains. Journal of Biomedicine and Biotechnology, Hindawi Publishing Corporation, 2009, 2009, pp.464986. 〈10.1155/2009/464986〉. 〈hal-01659292〉
  • Catherine Eng, Charu Asthana, Bertrand Aigle, Sébastien Hergalant, Jean-Francois Mari, et al.. A new data mining approach for the detection of bacterial promoters combining stochastic and combinatorial methods. Journal of Computational Biology, Mary Ann Liebert, 2009, 16 (9), pp.1211-1225. 〈10.1089/cmb.2008.0122〉. 〈inria-00419969〉
  • Robert Bunet, M. V. Mendes, Nicolas Rouhier, Xiuhua Pang, L. Hotel, et al.. Regulation of the Synthesis of the Angucyclinone Antibiotic Alpomycin in Streptomyces ambofaciens by the Autoregulator Receptor AlpZ and Its Specific Ligand. Journal of Bacteriology, American Society for Microbiology, 2008, 190 (9), pp.3293 - 3305. 〈10.1128/JB.01989-07〉. 〈hal-01659448〉
  • Fabrice Touzain, Sophie Schbath, Isabelle Debled-Rennesson, Bertrand Aigle, Gregory Kucherov, et al.. SIGffRid: A tool to search for sigma factor binding sites in bacterial genomes using comparative approach and biologically driven statistics. BMC Bioinformatics, BioMed Central, 2008, 9, 〈10.1186/1471-2105-9-73〉. 〈inria-00580657〉
  • Samiha Sioud, Ines Karray-Rebai, Hedi Aouissaoui, Bertrand Aigle, Samir Bejar, et al.. Targeted Gene Disruption of the Cyclo (L-Phe, L-Pro) Biosynthetic Pathway in Streptomyces sp. US24 Strain. Journal of Biomedicine and Biotechnology, Hindawi Publishing Corporation, 2007, 2007, pp.1 - 9. 〈10.1155/2007/91409〉. 〈hal-01659462〉
  • F. Choulet, A. Gallois, B. Aigle, S. Mangenot, C. Gerbaud, et al.. Intraspecific variability of the terminal regions of the Streptomyces ambofaciens. Journal of Bacteriology, American Society for Microbiology, 2006, 188, p 6599-6610. 〈hal-00101141〉
  • Frédéric Choulet, Alexandre Gallois, B. Aigle, Sophie Mangenot, Claude Gerbaud, et al.. Intraspecific Variability of the Terminal Inverted Repeats of the Linear Chromosome of Streptomyces ambofaciens. Journal of Bacteriology, American Society for Microbiology, 2006, 188 (18), pp.6599 - 6610. 〈10.1128/JB.00734-06〉. 〈hal-01659064〉
  • F. Choulet, B. Aigle, A. Gallois, S. Mangenot, C. Gerbaud, et al.. Evolution of the terminal regions of the Streptomyces linear chromosome. Molecular Biology and Evolution, Oxford University Press (OUP), 2006, 23, p 2361-2369. 〈hal-00112247〉
  • Bertrand Aigle, Xiuhua Pang, Bernard Decaris, Pierre Leblond. Involvement of AlpV, a New Member of the Streptomyces Antibiotic Regulatory Protein Family, in Regulation of the Duplicated Type II Polyketide Synthase alp Gene Cluster in Streptomyces ambofaciens. Journal of Bacteriology, American Society for Microbiology, 2005, 187 (7), pp.2491 - 2500. 〈10.1128/JB.187.7.2491–2500.2005〉. 〈hal-01659049〉
  • Virginie Roth, Bertrand Aigle, Robert Bunet, Thomas Wenner, Céline Fourrier, et al.. Differential and Cross-Transcriptional Control of Duplicated Genes Encoding Alternative Sigma Factors in Streptomyces ambofaciens. Journal of Bacteriology, American Society for Microbiology, 2004, 186 (16), pp.5355 - 5365. 〈10.1128/JB.186.16.5355–5365.2004〉. 〈hal-01659043〉
  • Thomas Wenner, Virginie Roth, Gilles Fischer, Céline Fourrier, Bertrand Aigle, et al.. End-to-end fusion of linear deleted chromosomes initiates a cycle of genome instability in Streptomyces ambofaciens. Molecular Microbiology, Wiley, 2003, 50 (2), pp.411-425. 〈10.1046/j.1365-2958.2003.03698.x〉. 〈hal-01659028〉
  • B. Aigle, Anne Catherine Holl, Jaime F. Angulo, Pierre Leblond, Bernard Decaris. Characterization of two Streptomyces ambofaciens recA mutants: identification of the RecA protein by immunoblotting. FEMS Microbiology Letters, Wiley-Blackwell, 1997, 149, pp.181-7. 〈10.1111/j.1574-6968.1997.tb10326.x〉. 〈hal-01658772〉
  • Dominique Vandewiele, Jean-Nicolas Volff, Bertrand Aigle, Jean-Marc Simonet, Bernard Decaris. Isolation and characterization of a mutator strain of Streptomyces ambofaciens ATCC23877 exhibiting an increased level of genetic instability. Canadian Journal of Microbiology, NRC Research Press, 1996, 42 (6), pp.562 - 570. 〈10.1139/m96-076〉. 〈hal-01659581〉
  • B. Aigle, Dominique Schneider, Cécile Morilhat, Dominique Vandewiele, Anne Dary, et al.. An amplifiable and deletable locus of Streptomyces ambofaciens RP181110 contains a very large gene homologous to polyketide synthase genes. Microbiology, Microbiology Society, 1996, 142 (10), pp.2815 - 2824. 〈10.1099/13500872-142-10-2815〉. 〈hal-01659577〉
  • Dominique Schneider, Bertrand Aigle, Pierre Leblond, Jean-Marc Simonet, Bernard Decaris. Analysis of genome instability in Streptomyces ambofaciens. Journal of general microbiology, Society for General Microbiology, (Journal Sales), 1993, 139 (11), pp.2559-2567. 〈10.1099/00221287-139-11-2559〉. 〈hal-01658593〉

Communication dans un congrès10 documents

  • Drago Haas, Matthieu Barba, Cláudia Vincente, Géraldine Le Goff, Jamal Ouazzani, et al.. Searching For Specialized Metabolites Gene Clusters By Mining Genomic Islands: A New Comparative Genomics-Based Approach. International Symposium on the Biology of Actinomycetes, May 2017, Jeju, South Korea. 〈hal-01655211〉
  • Emmanuelle Jacquet, Bernard Gaume, Yves Gaillard, Eric Descourvières, Pascale Marange, et al.. Pédagogie renouvelée pour des cursus d'ingénierie à l'université. Colloque sur l'Enseignement des Technologies et des Sciences de l'Information et des Systèmes, CETSIS 2014, Oct 2014, Besançon, France. 2014. 〈hal-01094950〉
  • Sébastien Hergalant, Bertrand Aigle, Pierre Leblond, Jean-François Mari. Fouille de données du génome à l'aide de modèles de Markov cachés. Extraction et Gestion de Connaissances - EGC 2005, Jan 2005, Paris/France, France. pp.141 -- 148, 2005. 〈inria-00001213〉
  • Fabrice Touzain, Sophie Schbath, Isabelle Debled-Rennesson, Bertrand Aigle, Pierre Leblond, et al.. SIGffRid : Programme de recherche des sites de fixation des facteurs de transcription par approche comparative. Guy Perrière, Alain Guénoche et Christophe Geourjon. Journées Ouvertes Biologie Informatique Mathématiques - JOBIM'05, Jul 2005, Lyon, France. pp.417-425, 2005. 〈inria-00000191〉
  • Sébastien Hergalant, Bertrand Aigle, Bernard Decaris, Jean-François Mari, Pierre Leblond. Classification non supervisée par HMM de sites de fixation de facteurs de transcription chez les bactéries. 5èmes Journées Ouvertes : Biologie, Informatique et Mathématiques - JOBIM'04, 2004, Montréal, Canada, 1 p, 2004. 〈inria-00107788〉
  • Fabrice Touzain, Patricia Lavigne, Isabelle Debled-Rennesson, Bertrand Aigle, Pierre Leblond, et al.. Identification of Transcription Factor Binding Sites in Streptomyces coelicolor A3(2) by Phylogenetic Comparison. European Conference for Computer Biology - ECCB'2003, 2003, Paris, France, 2003. 〈inria-00099608〉
  • Sébastien Hergalant, Bertrand Aigle, Bernard Decaris, Jean-François Mari, Pierre Leblond. HMM, an Efficient Way to Detect Transcriptional Promoters in Bacterial Genomes?. European Conference on Computational Biology - ECCB'2003, Sep 2003, Paris, France, pp.417--419, 2003. 〈inria-00099570〉
  • Patricia Lavigne, Isabelle Debled-Rennesson, Bertrand Aigle, Pierre Leblond, Gregory Kucherov. Identification of transcription factor binding sites in the genome of Streptomyces coelicolor A3(2). 3ème Journées Post-Génomique de la DOUA 2003 - JPGD'03, 2003, Lyon, France, 2003. 〈inria-00099609〉
  • Sébastien Hergalant, Bertrand Aigle, Bernard Decaris, Pierre Leblond, Jean-François Mari. Intragenomic reiterations detection using hidden Markov models. 10th International Conference on Intelligent Systems for Molecular Biology - ISMB 2002, Aug 2002, Edmonton, Canada, 1 p, 2002. 〈inria-00100914〉
  • Sébastien Hergalant, Bertrand Aigle, Bernard Decaris, Pierre Leblond, Jean-François Mari. Fouille de données à l'aide de HMM : Application à la détection de réitérations intragénomiques. Journées Ouvertes Biologie Informatique Mathématiques - JOBIM'02, 2002, Saint Malo, France, pp.269-273, 2002. 〈inria-00100752〉

Poster1 document

  • Frédéric Choulet, Bertrand Aigle, F. X. Francou, Alexandre Gallois, Céline Fourrier, et al.. Evidence for a High Heterogeneity Between the Terminal Regions of the Chromosomes of Two Phylogenetically Close Species, Streptomyces ambofaciens and Streptomyces coelicolor by Genome Comparison. Streptomyces dissemination meeting, Jul 2003, Guilford, United Kingdom. 2003. 〈hal-01182814〉

Chapitre d'ouvrage1 document

  • Bertrand Aigle, Robert Bunet, Christophe Corre, Amélie Garenaux, S. Huang, et al.. Genome-guided Exploration of Streptomyces ambofaciens Secondary Metabolism. Paul J Dyson Institute of Life Sciences, School of Medicine, Swansea, UK. Streptomyces: Molecular Biology and Biotechnology, Caister Academic Press, Chapter 10 pp. 179-194, 2011, 978-1-904455-77-6. 〈hal-01667184〉

Brevet1 document

  • Bertrand Aigle, Gregory L Challis, Luisa Laureti, Lijiang Song, Pierre Leblond. Stambomycin and derivatives: their production and their use as drugs. France, Patent n° : WO2011009938. 2011. 〈hal-01655316〉