CV Accueil - Archive ouverte HAL

	EPIK: Precise and scalable evolutionary placement with informative $k$-mers Nikolai Romashchenko , Benjamin Linard , Fabio Pardi , Eric Rivals Bioinformatics, 2023, 39 (12), pp.btad692. ⟨10.1093/bioinformatics/btad692⟩ Article dans une revue lirmm-04308461v1
	Computing Phylo-k-mers Nikolai Romashchenko , Benjamin Linard , Eric Rivals , Fabio Pardi IEEE/ACM Transactions on Computational Biology and Bioinformatics, 2023, 20 (5), pp.2889-2897. ⟨10.1109/TCBB.2023.3278049⟩ Article dans une revue lirmm-03778953v2
	PEWO: a collection of workflows to benchmark phylogenetic placement Benjamin Linard , Nikolai Romashchenko , Fabio Pardi , Eric Rivals Bioinformatics, 2020, 36 (21), pp.5264-5266. ⟨10.1093/bioinformatics/btaa657⟩ Article dans une revue hal-02905244v1
	Rapid screening and detection of inter-type viral recombinants using phylo- $k$ -mers Guillaume E. Scholz , Benjamin Linard , Nikolai Romashchenko , Eric Rivals , Fabio Pardi Bioinformatics, 2020, pp.#btaa1020. ⟨10.1093/bioinformatics/btaa1020⟩ Article dans une revue hal-03094833v1
	Rapid alignment-free phylogenetic identification of metagenomic sequences Benjamin Linard , Krister M. Swenson , Fabio Pardi Bioinformatics, 2019, 35 (18), pp.3303-3312. ⟨10.1093/bioinformatics/btz068⟩ Article dans une revue lirmm-02410441v1

	Rapid alignment-free phylogenec placement via ancestral k-mers Benjamin Linard , Krister M. Swenson , Fabio Pardi MCEB: Mathematical and Computational Evolutionary Biology, Jun 2018, St Martin de Londres, France Communication dans un congrès lirmm-01964481v1

	Rapid alignment-free phylogenetic identification of metagenomic sequences Benjamin Linard , Krister M. Swenson , Fabio Pardi 2019 Pré-publication, Document de travail lirmm-01964474v2

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