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Human Genome Replication Proceeds through Four Chromatin States
Hannah Julienne
,
Azédine Zoufir
,
Benjamin Audit
,
Alain Arneodo
Article dans une revue
hal-01557078v1
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Revisiting polymer statistical physics to account for the presence of long-range-correlated structural disorder in 2D DNA chains
J. Moukhtar
,
C. Vaillant
,
B. Audit
,
A. Arneodo
Article dans une revue
istex
hal-01557089v1
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Wavelet-based rnultifractal analysis of dynamic infrared thermograms to assist in early breast cancer diagnosis
E. Gerasimova
,
B. Audit
,
S. G. Roux
,
A. Khalil
,
O. Gileva
,
et al.
Article dans une revue
hal-01556929v1
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Ubiquitous human 'master' origins of replication are encoded in the DNA sequence via a local enrichment in nucleosome excluding energy barriers
Guenola Drillon
,
Benjamin Audit
,
Françoise Argoul
,
Alain Arneodo
Article dans une revue
ensl-01141381v1
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Wavelet-based multifractal analysis of dynamic infrared thermograms to assist in early breast cancer diagnosis
Evgeniya Gerasimova
,
Benjamin Audit
,
Stephane G. Roux
,
André Khalil
,
Olga Gileva
,
et al.
Article dans une revue
hal-01586151v1
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Thermodynamics of fractal signals based on wavelet analysis: application to fully developed turbulence data and DNA sequences
A. Arneodo
,
B. Audit
,
Emmanuel Bacry
,
S. Manneville
,
J. F. Muzy
,
et al.
Article dans une revue
hal-01557122v1
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Decoding Nucleosome-Depleted Regions: Insights from Epigenetic Marks, Nucleosome Size, and Thermodynamic Modelling
Kévin Tartour
,
Jérémy Barbier
,
Kharerin Hungyo
,
Fabien Sassolas
,
Cédric Vaillant
,
et al.
2023
Pré-publication, Document de travail
hal-04305968v1
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Linking the DNA strand asymmetry to the spatio-temporal replication program II. Accounting for neighbor-dependent substitution rates
A. Baker
,
C. L. Chen
,
H. Julienne
,
B. Audit
,
Y. d'Aubenton-Carafa
,
et al.
Article dans une revue
hal-01557084v1
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Time-Scale Hybrid Continuous-Discrete Sliding Frank-Wolfe Method
Clara Lage
,
Nelly Pustelnik
,
Jean-Michel Arbona
,
Benjamin Audit
2024
Pré-publication, Document de travail
hal-04146737v2
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Effect of Genomic Long-Range Correlations on DNA Persistence Length: From Theory to Single Molecule Experiments
Julien Moukhtar
,
Cendrine Faivre-Moskalenko
,
Pascale Milani
,
Benjamin Audit
,
Cédric Vaillant
,
et al.
Article dans une revue
hal-01556946v1
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Numerical Study of Novel Ratiometric Sensors Based on Plasmon–Exciton Coupling
Yuankai Tang
,
Xiantong Yu
,
Haifeng Pan
,
Jinquan Chen
,
Benjamin Audit
,
et al.
Article dans une revue
hal-01628018v1
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Human ORC/MCM density is low in active genes and correlates with replication time but does not delimit initiation zones
Nina Kirstein
,
Alexander Buschle
,
Xia Wu
,
Stefan Krebs
,
Helmut Blum
,
et al.
Article dans une revue
hal-03442948v1
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Large replication skew domains delimit GC-poor gene deserts in human
Lamia Zaghloul
,
Guénola Drillon
,
Rasha E. Boulos
,
Françoise Argoul
,
Claude Thermes
,
et al.
Article dans une revue
ensl-01141382v1
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SWDreader: A wavelet-based algorithm using spectral phase to characterize spike-wave morphological variation in genetic models of absence epilepsy
C. D. Richard
,
A. Tanenbaum
,
B. Audit
,
A. Arneodo
,
A. Khalil
,
et al.
Article dans une revue
hal-01557071v1
|
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An exponential core in the heart of the yeast protein interaction network.
José B Pereira-Leal
,
Benjamin Audit
,
José M Peregrin-Alvarez
,
Christos A Ouzounis
Article dans une revue
ensl-00175658v1
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Organization of DNA replication origin firing in Xenopus egg extracts : the role of intra-S checkpoint
Diletta Ciardo
,
Olivier Haccard
,
Hemalatha Narassimprakash
,
Jean-Michel Arbona
,
Olivier Hyrien
,
et al.
2020
Pré-publication, Document de travail
hal-02990823v1
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FORK-seq: replication landscape of the Saccharomyces cerevisiae genome by nanopore sequencing
Magali Hennion
,
Jean-Michel Arbona
,
Laurent Lacroix
,
Corinne Cruaud
,
Bertrand Theulot
,
et al.
Article dans une revue
hal-03055281v1
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Expliquer la classification d'expression de gènes par la méthode des gradients intégrés
Myriam Bontonou
,
Jean-Michel Arbona
,
Benjamin Audit
,
Pierre. Borgnat
GRETSI, 29e Colloque sur le traitement du signal et des images, GRETSI, Aug 2023, Grenoble, France. pp.1233-1236
Communication dans un congrès
hal-04226971v1
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From DNA sequence to chromatin organization: the fundamental role of genomic long-range correlations.
Alain Arneodo
,
Benjamin Audit
,
Cendrine Faivre-Moskalenko
,
Julien Moukhtar
,
Cédric Vaillant
,
et al.
Académie Royale de Belgique, pp.104, 2008, Classes des Sciences
Ouvrages
hal-00374820v1
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3D chromatin conformation correlates with replication timing and is conserved in resting cells
B. Moindrot
,
B. Audit
,
P. Klous
,
A. Baker
,
C. Thermes
,
et al.
Article dans une revue
hal-01557080v1
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Open chromatin encoded in DNA sequence is the signature of 'master' replication origins in human cells
B. Audit
,
L. Zaghloul
,
C. Vaillant
,
G. Chevereau
,
Y. d'Aubenton-Carafa
,
et al.
Article dans une revue
hal-01557097v1
|
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Active transcription regulates ORC/MCM distribution whereas replication timing correlates with ORC density in human cells
Nina Kirstein
,
Alexander Buschle
,
Xia Wu
,
Stefan Krebs
,
Helmut Blum
,
et al.
Autre publication scientifique
hal-02410480v1
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Human ORC/MCM density is low in active genes and correlates with replication time but does not solely define replication initiation zones
Nina Kirstein
,
Alexander Buschle
,
Xia Wu
,
Stefan Krebs
,
Helmut Blum
,
et al.
2020
Pré-publication, Document de travail
hal-03052952v1
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Multi-scale structural community organisation of the human genome
Rasha E. Boulos
,
Nicolas Tremblay
,
Alain Arneodo
,
Pierre Borgnat
,
Benjamin Audit
Article dans une revue
hal-01507455v1
|
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From the chromatin interaction network to the organization of the human genome into replication N/U-domains
Rasha E Boulos
,
Hanna Julienne
,
Antoine Baker
,
Chun-Long Chen
,
Nataliya Petryk
,
et al.
Article dans une revue
cea-01120311v1
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Insertion of Alu elements impacts sequence-mediated nucleosome positioning
Jérémy Barbier
,
Fabien Sassolas
,
Cédric Vaillant
,
Jean-Nicolas Volff
,
Frédéric G. Brunet
,
et al.
23ième Journées Ouvertes en Biologie, Informatique et Mathématiques (JOBIM), Jul 2022, Rennes, France. pp.130-137
Communication dans un congrès
hal-03764544v1
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Coupling between Sequence-Mediated Nucleosome Organization and Genome Evolution
Jérémy Barbier
,
Cédric Vaillant
,
Jean-Nicolas Volff
,
Frédéric Brunet
,
Benjamin Audit
Article dans une revue
hal-03452653v1
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Multifractal analysis of dynamic infrared imaging of breast cancer
E. Gerasimova
,
B. Audit
,
S. G. Roux
,
A. Khalil
,
Françoise Argoul
,
et al.
Article dans une revue
istex
hal-01556932v1
|
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Revealing Long-Range Interconnected Hubs in Human Chromatin Interaction Data Using Graph Theory
R. E. Boulos
,
A. Arneodo
,
P. Jensen
,
B. Audit
Article dans une revue
hal-01557076v1
|
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Bifractality of human DNA strand-asymmetry profiles results from transcription.
Samuel Nicolay
,
Edward-Benedict Brodie of Brodie
,
M. Touchon
,
Benjamin Audit
,
Y. d'Aubenton-Carafa
,
et al.
Article dans une revue
ensl-00198448v1
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