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Keywords

Bud dormancy Malus x domestica Borkh Prediction Cerisier Pisum sativum Crop modeling Prunus persica L Batch Flowering Changement climatique ChIP-seq/Chromatin immunoprecipitation-sequencing Plant growth model Photoperiod Phenology Ecology Digital organism Prunus avium Prunus avium L Arbre fruitier Dormancy Climat
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25

Bénédicte Wenden

I am a research scientist at INRAE Bordeaux-Aquitaine (France), in the UMR1332 Biologie du Fruit et Pathologie. I like to define myself as a multi-disciplinary scientist, having carried out several systems biology projects on different plant species. After studying green pea and Arabidopsis thaliana, I have now moved to fruit trees, using sweet cherry as a model species.

As part of the Adaptation of Sweet Cherry to Climate Change (A3C) team, I study the adaptation of cherry tree to climate change through modelling. I integrate large datasets of climatic, phenotypic and genomic data into a descriptive and predictive model of the phenological stages of cherry tree, with the ultimate aim of selecting the right plant material adapted to future climate conditions with guaranteed fruit quality.

 

Journal articles21 documents

  • Noémie Vimont, Adrian Schwarzenberg, Mirela Domijan, Armel Donkpegan, Rémi Beauvieux, et al.. Fine tuning of hormonal signaling is linked to dormancy status in sweet cherry flower buds. Tree Physiology, Oxford University Press (OUP): Policy B - Oxford Open Option B, 2021, 41, pp.544-561. ⟨10.1093/treephys/tpaa122⟩. ⟨hal-03038118⟩
  • Bénédicte Wenden, Mahendra Mariadassou, Frank-M Chmielewski, Yann Vitasse. Shifts in the temperature-sensitive periods for spring phenology in European beech and pedunculate oak clones across latitudes and over recent decades.. Global Change Biology, Wiley, 2020, 26, pp.1808-1819. ⟨10.1111/gcb.14918⟩. ⟨hal-02622770⟩
  • Rebecca Darbyshire, Jose Navas López, Xinxin Song, Bénédicte Wenden, Dugald Close. Modelling cherry full bloom using ‘space-for-time’ across climatically diverse growing environments. Agricultural and Forest Meteorology, Elsevier Masson, 2020, 284, pp.107901. ⟨10.1016/j.agrformet.2020.107901⟩. ⟨hal-02559689⟩
  • Noémie Vimont, Fu Xiang Quah, David Guillaume Schöpfer, François Roudier, Elisabeth Dirlewanger, et al.. ChIP-seq and RNA-seq for complex and low-abundance tree buds reveal chromatin and expression co-dynamics during sweet cherry bud dormancy. Tree Genetics and Genomes, Springer Verlag, 2020, 16 (1), pp.9. ⟨10.1007/s11295-019-1395-9⟩. ⟨hal-02623341⟩
  • Noémie Vimont, Mathieu Fouche, José Antonio Campoy, Meixuezi Tong, Mustapha Arkoun, et al.. From bud formation to flowering: transcriptomic state defines the cherry developmental phases of sweet cherry bud dormancy. BMC Genomics, BioMed Central, 2019, 20 (1), pp.974. ⟨10.1186/s12864-019-6348-z⟩. ⟨hal-02503665⟩
  • José Antonio Campoy, Rebecca Darbyshire, Elisabeth Dirlewanger, José Quero-Garcia, Bénédicte Wenden. Yield potential definition of the chilling requirement reveals likely underestimation of the risk of climate change on winter chill accumulation.. International Journal of Biometeorology, Springer Verlag, 2019, 63 (2), pp.183-192. ⟨10.1007/s00484-018-1649-5⟩. ⟨hal-02625590⟩
  • Rémi Beauvieux, Bénédicte Wenden, Elisabeth Dirlewanger. Bud Dormancy in Perennial Fruit Tree Species: A Pivotal Role for Oxidative Cues. Frontiers in Plant Science, Frontiers, 2018, 9, pp.657. ⟨10.3389/fpls.2018.00657⟩. ⟨hal-02625631⟩
  • Bénédicte Wenden, José Antonio Campoy, Julien Lecourt, Gregorio López Ortega, Michael Blanke, et al.. A collection of European sweet cherry phenology data for assessing climate change. Scientific Data , Nature Publishing Group, 2016, 3, pp.160108. ⟨10.1038/sdata.2016.108⟩. ⟨hal-02630975⟩
  • José Quero-Garcia, Guillaume Roch, Gérard Charlot, Christian Hilaire, Teresa Barreneche, et al.. Etude des déterminants génétiques et moléculaires de caractères influencés par le changement climatique chez l'abricotier et le cerisier. Innovations Agronomiques, INRAE, 2016, pp.51-58. ⟨10.15454/1.472108874009284E12⟩. ⟨hal-01578240⟩
  • Sophie Castede, José Antonio Campoy, Loick Le Dantec, José Quero-Garcia, Teresa Barreneche, et al.. Mapping of Candidate Genes Involved in Bud Dormancy and Flowering Time in Sweet Cherry (Prunus avium).. PLoS ONE, Public Library of Science, 2015, 10 (11), pp.e0143250. ⟨10.1371/journal.pone.0143250⟩. ⟨hal-02640312⟩
  • Yin Hoon Chew, Bénédicte Wenden, Anna Flis, Virginie Mengin, Jasper Taylor, et al.. Correction for Chew et al., Multiscale digital Arabidopsis predicts individual organ and whole-organism growth.. Proceedings of the National Academy of Sciences of the United States of America , National Academy of Sciences, 2015, 112 (19), pp.E2556. ⟨10.1073/pnas.1506983112⟩. ⟨hal-02636713⟩
  • Sophie Castede, José Antonio Campoy, José Quero-Garcia, Loick Le Dantec, Maria-Das-Dores Lafargue, et al.. Genetic determinism of phenological traits highly affected by climate change in Prunus avium: flowering date dissected into chilling and heat requirements. New Phytologist, Wiley, 2014, 202 (2), pp.703-15. ⟨10.1111/nph.12658⟩. ⟨hal-02637961⟩
  • Evelyne Costes, Laurent Crespel, Béatrice Denoyes, Philippe Morel, Marie-Noëlle Demene, et al.. Bud structure, position and fate generate various branching patterns along shoots of closely related Rosaceae species: a review. Frontiers in Plant Science, Frontiers, 2014, 5, pp.1-11. ⟨10.3389/fpls.2014.00666⟩. ⟨hal-01168777⟩
  • Yin Hoon Chew, Bénédicte Wenden, Anna Flis, Virginie Mengin, Jasper Taylor, et al.. Multiscale digital Arabidopsis predicts individual organ and whole-organism growth. Proceedings of the National Academy of Sciences of the United States of America , National Academy of Sciences, 2014, 111 (39), pp.E4127-E4136. ⟨10.1073/pnas.1410238111⟩. ⟨hal-02063348⟩
  • Bénédicte Wenden, David L. K. Toner, Sarah K. Hodge, Ramon Grima, Andrew J. Millar. Spontaneous spatiotemporal waves of gene expression from biological clocks in the leaf. Proceedings of the National Academy of Sciences of the United States of America , National Academy of Sciences, 2012, 109 (17), pp.6757-6762. ⟨10.1073/pnas.1118814109⟩. ⟨hal-02647140⟩
  • James L. Weller, Lim Chee Liew, Valerie F. G. Hecht, Vinodan Rajandran, Rebecca E. Laurie, et al.. A conserved molecular basis for photoperiod adaptation in two temperate legumes. Proceedings of the National Academy of Sciences of the United States of America , National Academy of Sciences, 2012, 109 (51), pp.21158 - 21163. ⟨10.1073/pnas.1207943110⟩. ⟨hal-01004100⟩
  • Bénédicte Wenden, László Kozma-Bognár, Kieron D Edwards, Anthony J W Hall, James C W Locke, et al.. Light inputs shape the Arabidopsis circadian system.. Plant Journal, Wiley, 2011, 66 (3), pp.480-91. ⟨10.1111/j.1365-313X.2011.04505.x⟩. ⟨hal-02652121⟩
  • Bénédicte Wenden, Catherine Rameau. Systems biology for plant breeding: the example of flowering time in pea.. Comptes Rendus Biologies, Elsevier Masson, 2009, 332 (11), pp.998-1006. ⟨10.1016/j.crvi.2009.09.011⟩. ⟨hal-02656651⟩
  • James L Weller, Valérie Hecht, Lim Chee Liew, Frances C Sussmilch, Bénédicte Wenden, et al.. Update on the genetic control of flowering in garden pea.. Journal of Experimental Botany, Oxford University Press (OUP), 2009, 60 (9), pp.2493-9. ⟨10.1093/jxb/erp120⟩. ⟨hal-02659562⟩
  • Bénédicte Wenden, Elizabeth A. Dun, Jim Hanan, Bruno Andrieu, James L. Weller, et al.. Computational analysis of flowering in pea (Pisum sativum). New Phytologist, Wiley, 2009, 184, pp.153-167. ⟨10.1111/j.1469-8137.2009.02952.x⟩. ⟨hal-01192266⟩
  • Antoine Blanchard, Bénédicte Wenden. Montrer la science en train de se faire par les écrits scientifiques. Didaskalia (Paris), Institut national de recherche pédagogique, 2008, 32, pp.185-199. ⟨halshs-01247959⟩

Book sections2 documents

  • Nathalie Ollat, Francois Gastal, Sylvain Pellerin, Romain Barillot, Agnes Calonnec, et al.. Quelle agriculture demain en Nouvelle-Aquitaine ?. Anticiper les changements climatiques demain en Nouvelle-Aquitaine pour agir dans les territoires : Prévoir pour agir n°2, Editions Région Nouvelle-Aquitaine, 488 p., 2018, 978-2-9564516-0-0. ⟨hal-02789131⟩
  • Bénédicte Wenden, José Antonio Campoy, Martin Jensen, Gregorio Lopez-Ortega. Climatic Limiting Factors: Temperature. Cherries: Botany, Production and Uses, CABI, 2017, 9781780648378. ⟨hal-02788959⟩

Preprints, Working Papers, ...2 documents

  • Noémie Vimont, Mathieu Fouche, José Campoy, Meixuezi Tong, Mustapha Arkoun, et al.. From bud formation to flowering: transcriptomic state defines the cherry developmental phases of sweet cherry bud dormancy. 2020. ⟨hal-02503000⟩
  • Noémie Vimont, Fu Xiang Quah, David Guillaume-Schöpfer, François Roudier, Elisabeth Dirlewanger, et al.. ChIP-seq and RNA-seq for complex and low-abundance tree buds reveal chromatin and expression co-dynamics during sweet cherry bud dormancy. 2019. ⟨hal-02788335⟩