Arnaud Estoup

175

Documents

Publications

	Rapid and transient evolution of local adaptation to seasonal host fruits in an invasive pest fly Laure Olazcuaga , Julien Foucaud , Candice Deschamps , Anne Loiseau , Jean-Loup Claret Evolution Letters, 2022, 6 (6), pp.490-505. ⟨10.1002/evl3.304⟩ Article dans une revue hal-03936160v1
	Macroecological patterns of fruit infestation rates by the invasive fly Drosophila suzukii in the wild reservoir host plant Sambucus nigra Romain Ulmer , Aude Couty , Patrice Eslin , Manuella Catterou , Lucas Baliteau Agricultural and Forest Entomology, 2022, 24 (4), pp.548-563. ⟨10.1111/afe.12520⟩ Article dans une revue hal-03714420v1
	ƒ‐statistics estimation and admixture graph construction with Pool‐Seq or allele count data using the R package poolfstat Mathieu Gautier , Renaud Vitalis , Laurence Flori , Arnaud Estoup Molecular Ecology Resources, 2022, 22 (4), pp.1394-1416. ⟨10.1111/1755-0998.13557⟩ Article dans une revue hal-03481066v1
	Extending Approximate Bayesian Computation with Supervised Machine Learning to infer demographic history from genetic polymorphisms using DIYABC Random Forest François‐david Collin , Ghislain Durif , Louis Raynal , Eric Lombaert , Mathieu Gautier Molecular Ecology Resources, 2021, 21 (8), pp.2598-2613. ⟨10.1111/1755-0998.13413⟩ Article dans une revue hal-03229207v1
	The Worldwide Invasion of Drosophila suzukii Is Accompanied by a Large Increase of Transposable Element Load and a Small Number of Putatively Adaptive Insertions Vincent Mérel , Patricia Gibert , Inessa Buch , Valentina Rodriguez Rada , Arnaud Estoup Molecular Biology and Evolution, 2021, 38 (10), pp.4252-4267. ⟨10.1093/molbev/msab155⟩ Article dans une revue hal-03417234v1
	Adaptation and correlated fitness responses over two time scales in Drosophila suzukii populations evolving in different environments Laure Olazcuaga , Julien Foucaud , Mathieu Gautier , Candice Deschamps , Anne Loiseau Journal of Evolutionary Biology, inPress, ⟨10.1111/jeb.13878⟩ Article dans une revue hal-03261534v2
	A whole-genome scan for association with invasion success in the fruit fly Drosophila suzukii using contrasts of allele frequencies corrected for population structure Laure Olazcuaga , Anne Loiseau , Hugues Parrinello , Mathilde Paris , Antoine Fraimout Molecular Biology and Evolution, 2020, 37 (8), pp.2369-2385. ⟨10.1093/molbev/msaa098⟩ Article dans une revue hal-02563272v1
	A young age of subspecific divergence in the desert locust Schistocerca gregaria , inferred by ABC Random Forest Marie-Pierre Chapuis , Louis Raynal , Christophe Plantamp , Christine N. Meynard , Laurence Blondin Molecular Ecology, 2020, Peer Community in Evolutionary Biology, 29 (23), pp.4542-4558. ⟨10.1101/671867⟩ Article dans une revue hal-02953927v1
	Near-chromosome level genome assembly of the fruit pest Drosophila suzukii using long-read sequencing Mathilde Paris , Roxane Boyer , Rita Jaenichen , Jochen Wolf , Marianthi Karageorgi Scientific Reports, 2020, 10 (1), pp.11227. ⟨10.1038/s41598-020-67373-z⟩ Article dans une revue hal-02908174v1
	Oviposition Preference and Larval Performance of Drosphila suzukii (Diptera: Drosophilidae), Spotted-Wing Drosophila: Effects of Fruit Identity and Composition Laure Olazcuaga , Nicolas O. Rode , Julien Foucaud , Benoit Facon , Virginie Ravigné Environmental Entomology, 2019, 48 (4), pp.867-881. ⟨10.1093/ee/nvz062⟩ Article dans une revue hal-02629265v1
	Population management using gene drive: molecular design, models of spread dynamics and assessment of ecological risks Nicolas O. Rode , Arnaud A Estoup , Denis Bourguet , Virginie Courtier-Orgogozo , Florence Débarre Conservation Genetics, 2019, 20 (4), pp.671-690. ⟨10.1007/s10592-019-01165-5⟩ Article dans une revue hal-02338278v1
	ABC random forests for Bayesian parameter inference Louis Raynal , Jean-Michel Marin , Pierre Pudlo , Mathieu Ribatet , Christian Robert Bioinformatics, 2019, 35 (10), pp.1720-1728. ⟨10.1093/bioinformatics/bty867⟩ Article dans une revue hal-01337189v2
	The taste of origin in a lady beetle: do males discriminate between females based on cuticular hydrocarbons? Pauline Legrand , Maryse Vanderplanck , Istvan Marko , Laurent Gillard , Georges Lognay Physiological Entomology, 2019, 44 (2), pp.160-168. ⟨10.1111/phen.12286⟩ Article dans une revue hal-02265406v1
	Cuticular hydrocarbon composition does not allow Harmonia axyridis males to identify the mating status of sexual partners Pauline Legrand , Maryse Vanderplanck , Stéphanie Lorge , Philippe Maesen , Georges Lognay Entomologia Generalis, 2019, 38 (3), pp.211-224. ⟨10.1127/entomologia/2019/0552⟩ Article dans une revue hal-02627681v1
	The Genomic Basis of Color Pattern Polymorphism in the Harlequin Ladybird Mathieu Gautier , Junichi Yamaguchi , Julien Foucaud , Anne Loiseau , Aurélien Ausset Current Biology - CB, 2018, 28 (20), pp.1-7. ⟨10.1016/j.cub.2018.08.023⟩ Article dans une revue hal-01864435v1
	Model choice using Approximate Bayesian Computation and Random Forests: analyses based on model grouping to make inferences about the genetic history of Pygmy human populations Arnaud A Estoup , Louis Raynal , Paul Verdu , Jean-Michel Marin Journal de la Société Française de Statistique, 2018, 159 (3), pp.167-190 Article dans une revue hal-02618438v1
	Mating Status Influences Cold Tolerance and Subsequent Reproduction in the Invasive Ladybird Harmonia axyridis Benoit Facon , Arnaud A Estoup , Ruth Hufbauer Gillies , Julien Foucaud , Ashraf Tayeh Frontiers in Ecology and Evolution, 2017, 5, pp.1-5. ⟨10.3389/fevo.2017.00108⟩ Article dans une revue hal-02629316v1
	A valuable work lying at the crossroad of neuro-ethology, evolution and ecology in the fruit pest Drosophila suzukii Arnaud A Estoup , Ruth A Hufbauer Peer Community In Evolutionary Biology, 2017, ⟨10.24072/pci.evolbiol.100017⟩ Article dans une revue hal-01501559v1
	Deciphering the Routes of invasion of Drosophila suzukii by Means of ABC Random Forest. Antoine Fraimout , Vincent Debat , Simon Fellous , Ruth A Hufbauer , Julien Foucaud Molecular Biology and Evolution, 2017, 34 (4), pp.980 - 996. ⟨10.1093/molbev/msx050⟩ Article dans une revue hal-01582586v1
	Genetic structure and invasion history of the house mouse (Mus musculus domesticus) in Senegal, West Africa: a legacy of colonial and contemporary times. Cédric Lippens , A. Estoup , M.K. Hima , Anne Loiseau , Caroline Tatard Heredity, 2017, 119 (2), pp.64-75. ⟨10.1038/hdy.2017.18⟩ Article dans une revue hal-01576202v1
	Reliable ABC model choice via random forests Pierre Pudlo , Jean-Michel Marin , Arnaud Estoup , Jean-Marie Cornuet , Mathieu Gautier Bioinformatics, 2016, 32 (6), pp.859 - 866. ⟨10.1093/bioinformatics/btv684⟩ Article dans une revue hal-01067925v1
	Reduced population size can induce quick evolution of inbreeding depression in the invasive ladybird Harmonia axyridis Guillaume Laugier , Gilles Le Moguedec , Wang Su , Tayeh Ashraf , Laurent Soldati Biological Invasions, 2016, 18 (10), pp.2871-2881. ⟨10.1007/s10530-016-1179-1⟩ Article dans une revue hal-01837365v1
	The harlequin ladybird, Harmonia axyridis: global perspectives on invasion history and ecology Helen E. Roy , Peter M. J. Brown , Tim Adriaens , Nick Berkvens , Isabel Borges Biological Invasions, 2016, 18 (4), pp.997-1044. ⟨10.1007/s10530-016-1077-6⟩ Article dans une revue hal-02062382v1
	Modeling spatial expansion of invasive alien species: relative contributions of environmental and anthropogenic factors to the spreading of the harlequin ladybird in France Sophie Veran , Sylvain Piry , Vincent Ternois , Christine Meynard , Benoit Facon Ecography, 2016, 39 (7), pp.665-675. ⟨10.1111/ecog.01389⟩ Article dans une revue hal-01604039v1
	Biological invasion and biological control select for different life histories Ashraf Tayeh , Ruth A. Hufbauer , Arnaud Estoup , Virginie Ravigné , Léa Frachon Nature Communications, 2015, 6, ⟨10.1038/ncomms8268⟩ Article dans une revue hal-02639655v1
	New set of microsatellite markers for the spotted-wing Drosophila suzukii (Diptera: Drosophilidae): a promising molecular tool for inferring the invasion history of this major insect pest Anne Fraimout , Anne Loiseau , Donald K. Price , Anne Xuéreb , Jean-François Martin European Journal of Entomology, 2015, 112, pp.855-859 Article dans une revue hal-02631599v1
	Evolutionary ecology of microsporidia associated with the invasive ladybird Harmonia axyridis Andreas Vilcinskas , Henrike Schmidtberg , Arnaud Estoup , Ashraf Tayeh , Benoit Facon Insect Science, 2015, 22 (3), pp.313 - 324. ⟨10.1111/1744-7917.12159⟩ Article dans une revue hal-02635976v1
	Complementarity of statistical treatments to reconstruct worldwide routes of invasion: the case of the Asian ladybird Harmonia axyridis Eric Lombaert , Thomas Guillemaud , Jonathan Lundgren , Robert Koch , Benoit Facon Molecular Ecology, 2014, 23, pp.5979-5997. ⟨10.1111/mec.12989⟩ Article dans une revue hal-02635016v1
	Cannibalism in invasive, native and biocontrol populations of the harlequin ladybird Ashraf Tayeh , Arnaud Estoup , Eric Lombaert , Thomas Guillemaud , Natalia Kirichenko BMC Evolutionary Biology, 2014, 14, ⟨10.1186/1471-2148-14-15⟩ Article dans une revue hal-01189948v1
	Invasion genetics of a human commensal rodent: the black rat Rattus rattus in Madagascar Carine Brouat , C. Tollenaere , Arnaud Estoup , Anne Loiseau , S. Sommer Molecular Ecology, 2014, 23 (16), pp.4153-4167. ⟨10.1111/mec.12848⟩ Article dans une revue hal-02636763v1
	Rapid increase in dispersal during range expansion in the invasive ladybird Harmonia axyridis Eric Lombaert , Arnaud Estoup , Benoit Facon , B. Joubard , J. C. Gregoire Journal of Evolutionary Biology, 2014, 27 (3), pp.508-517. ⟨10.1111/jeb.12316⟩ Article dans une revue hal-02637907v1
	DIYABC v2.0: a software to make approximate Bayesian computation inferences about population history using single nucleotide polymorphism, DNA sequence and microsatellite data. Jean-Marie Cornuet , Pierre Pudlo , Julien Veyssier , Alexandre Dehne-Garcia , Mathieu Gautier Bioinformatics, 2014, 30 (8), pp.1187-1189. ⟨10.1093/bioinformatics/btt763⟩ Article dans une revue hal-01337243v1
	Thermotolerance adaptation to human-modified habitats occurs in the native range of the invasive ant Wasmannia auropunctata before long-distance dispersal Julien Foucaud , Olivier REY , Stéphanie Robert , Laurent Crespin , Jerome Orivel Evolutionary Applications, 2013, 6 (4), pp.721--34. ⟨10.1111/eva.12058⟩ Article dans une revue hal-02281551v1
	Invasion genetics of the introduced black rat (Rattus rattus) in Senegal, West Africa Adam Konecny , Arnaud Estoup , Jean-Marc J.-M. Duplantier , Josef Bryja , Khalilou Ba Molecular Ecology, 2013, 22 (2), pp.286-300. ⟨10.1111/mec.12112⟩ Article dans une revue hal-02648945v1
	Androgenesis is a maternal trait in the invasive ant Wasmannia auropunctata Olivier REY , Benoît Facon , Julien Foucaud , Anne Loiseau , Arnaud Estoup Proceedings of the Royal Society B: Biological Sciences, 2013, 280 (1766), pp.20131181. ⟨10.1098/rspb.2013.1181⟩ Article dans une revue hal-04080705v1
	Distribution of endosymbiotic reproductive manipulators reflects invasion process and not reproductive system polymorphism in the little fire ant Wasmannia auropunctata Olivier REY , Arnaud Estoup , Benoit Facon , Anne Loiseau , Alexandre Aebi PLoS ONE, 2013, 8 (3), pp.e58467. ⟨10.1371/journal.pone.0058467⟩ Article dans une revue hal-00850303v1
	Investigating the genetic load of an emblematic invasive species: the case of the invasive harlequin ladybird Harmonia axyridis Ashraf Tayeh , Arnaud Estoup , Ruth Hufbauer , Virginie Ravigné , I. Goryacheva Ecology and Evolution, 2013, 3 (4), pp.864-871. ⟨10.1002/ece3.490⟩ Article dans une revue hal-01259745v1
	The effect of RAD allele dropout on the estimation of genetic variation within and between populations. Mathieu Gautier , Karim Gharbi , Timothee Cezard , Julien Foucaud , Carole Kerdelhué Molecular Ecology, 2013, 22 (11), pp.3165-78. ⟨10.1111/mec.12089⟩ Article dans une revue hal-00860611v1
	Increase in Male Reproductive Success and Female Reproductive Investment in Invasive Populations of the Harlequin Ladybird Harmonia axyridis Guillaume Laugier , Gilles Le Moguedec , Ashraf Tayeh , Anne Loiseau , Naoya Osawa PLoS ONE, 2013, 8 (10), ⟨10.1371/journal.pone.0077083⟩ Article dans une revue hal-01189772v1
	Estimation of population allele frequencies from next-generation sequencing data: pool-versus individual-based genotyping. Mathieu Gautier , Julien Foucaud , Karim Gharbi , Timothée Cézard , Maxime Galan Molecular Ecology, 2013, 22 (14), pp.3766-79. ⟨10.1111/mec.12360⟩ Article dans une revue hal-00860608v1
	Evolution in biocontrol strains: insight from the harlequin ladybird Harmonia axyridis Ashraf Tayeh , Arnaud Estoup , Guillaume Laugier , Anne Loiseau , Julie Turgeon Evolutionary Applications, 2012, 5 (5), pp.481-488. ⟨10.1111/j.1752-4571.2012.00274.x⟩ Article dans une revue hal-01218262v1
	Anthropogenically induced adaptation to invade (AIAI) : Contemporary adaptation to human-altered habitats within the native range can promote invasions Ruth Hufbauer , Benoit Facon , Virginie Ravigné , Julie Turgeon , Julien Foucaud Evolutionary Applications, 2012, 51 (2), pp.89-101. ⟨10.1111/J.1752-4571.2011.00211.X⟩ Article dans une revue hal-01218264v1
	Estimation of demo-genetic model probabilities with Approximate Bayesian Computation using linear discriminant analysis on summary statistics. Arnaud Estoup , Eric Lombaert , Jean-Michel Marin , Thomas Guillemaud , Pierre Pudlo Molecular Ecology Resources, 2012, 12 (5), pp.846-55. ⟨10.1111/j.1755-0998.2012.03153.x⟩ Article dans une revue hal-00796906v1
	Histoires de rencontres amoureuses Michel Renou , Denis Thiery , Edith Pajot , Birte Nielsen , Matthieu Keller INRA Presse Info, 2012, 15 p Article dans une revue hal-01191231v1
	Current distribution and population dynamics of the little fire ant supercolony in Cameroon M. Tindo , P.S. Mbenoun Masse , M. Kenne , R. Mony , Jérôme Orivel Insectes Sociaux, 2012, 59 (2), pp.175-182. ⟨10.1007/s00040-011-0202-x⟩ Article dans une revue hal-02651277v1
	Where do adaptive shifts occur during invasion? A multidisciplinary approach to unravelling cold adaptation in a tropical ant species invading the Mediterranean area Olivier REY , Gael G. Kergoat , Arnaud Estoup , Merav Wonshak , Anne Loiseau Ecology Letters, 2012, 15 (11), pp.1266-1275. ⟨10.1111/J.1461-0248.2012.01849.X⟩ Article dans une revue hal-02645897v1
	Inbreeding depression is purged in the invasive insect Harmonia axyridis Benoit Facon , Ruth A. Hufbauer , Ashraf Tayeh , Anne Loiseau , Eric Lombaert Current Biology - CB, 2011, 21 (5), pp.424-427. ⟨10.1016/j.cub.2011.01.068⟩ Article dans une revue hal-02644352v1
	Can things get worse when an invasive species hybridizes? The harlequin ladybird Harmonia axyridis in France as a case study Benoît Facon , Laurent Crespin , Anne Loiseau , Eric Lombaert , Alexandra Magro Evolutionary Applications, 2011, 4 (1), pp.71-88. ⟨10.1111/j.1752-4571.2010.00134.x⟩ Article dans une revue hal-03304047v1
	The global spread of Harmonia axyridis (Coleoptera: Coccinellidae): distribution, dispersal and routes of invasion Peter M.J. Brown , Cathleen E. Thomas , Eric Lombaert , Daniel L. Jeffries , Arnaud Estoup BioControl, 2011, 56 (4), pp.623-641. ⟨10.1007/s10526-011-9379-1⟩ Article dans une revue hal-02646957v1
	Stratified dispersal and increasing genetic variation during the invasion of central Europe by the western corn rootworm, [i]Diabrotica virgifera virgifera[/i] Marc Ciosi , N.J. Miller , S. Toepfe , Arnaud Estoup , Thomas Guillemaud Evolutionary Applications, 2011, 4 (1), pp.54-70. ⟨10.1111/j.1752-4571.2010.00133.x⟩ Article dans une revue hal-01218992v1
	Biological invasions in agricultural settings: insights from evolutionary biology and population genetics Thomas Guillemaud , Marc Ciosi , Eric Lombaert , Arnaud Estoup Comptes Rendus Biologies, 2011, 334 (3), pp.237-246. ⟨10.1016/j.crvi.2010.12.008⟩ Article dans une revue hal-02646885v1
	Meiotic Recombination Dramatically Decreased in Thelytokous Queens of the Little Fire Ant and Their Sexually Produced Workers Olivier REY , Anne Loiseau , Benoit Facon , Julien Foucaud , Jérôme Orivel Molecular Biology and Evolution, 2011, 28 (9), pp.2591-2601. ⟨10.1093/molbev/msr082⟩ Article dans une revue hal-03303975v1
	Ecological genetics of invasive alien species L.J. Lawson Handley , Arnaud Estoup , D.M. Evans , C.E. Thomas , Eric Lombaert BioControl, 2011, 56 (4), Special Issue: SI 409-428. ⟨10.1007/s10526-011-9386-2⟩ Article dans une revue hal-02650347v1
	Experimental evidence for the phenotypic impact of admixture between wild and biocontrol Asian ladybird (Harmonia axyridis) involved in the European invasion Julie Turgeon , Ashraf Tayeh , Benoit Facon , Eric Lombaert , P. de Clercq Journal of Evolutionary Biology, 2011, 24 (5), pp.1044-1052. ⟨10.1111/j.1420-9101.2011.02234.x⟩ Article dans une revue hal-02647701v1
	Inferring the origin of populations introduced from a genetically structured native range by approximate Bayesian computation: case study of the invasive ladybird Harmonia axyridis Eric Lombaert , Thomas Guillemaud , C. E. Thomas , L. J. Lawson Handley , J. Li Molecular Ecology, 2011, 20 (22), pp.4654 - 4670. ⟨10.1111/j.1365-294X.2011.05322.x⟩ Article dans une revue hal-02643512v1
	Characterization of polymorphic microsatellite loci in the neotropical plant ant allomerus decemarticulatus (Formicidae: Myrmicinae) and multiplexing with other microsatellites from the ant subfamily Myrmicinae Pierre-Jean G. Malé , Anne Loiseau , Arnaud Estoup , Angélique Quilichini , Jérôme Orivel European Journal of Entomology, 2010, 107, pp.673-675. ⟨10.14411/eje.2010.074⟩ Article dans une revue hal-01091213v1
	Inference on population history and model checking using DNA sequence and microsatellite data with the software DIYABC (v1.0) Jean-Marie Cornuet , Virginie Ravigné , Arnaud Estoup BMC Bioinformatics, 2010, 11, pp.401. ⟨10.1186/1471-2105-11-401⟩ Article dans une revue hal-02658867v1
	Bridgehead effect in the worldwide invasion of the biocontrol Harlequin Ladybird Eric Lombaert , Thomas Guillemaud , Jean-Marie Cornuet , Thibaut Malausa , Benoit Facon PLoS ONE, 2010, 5 (3), pp.e9743. ⟨10.1371/journal.pone.0009743⟩ Article dans une revue hal-02664647v1
	Thelytokous parthenogenesis, male clonality and genetic caste determination in the little fire ant: new evidence and insights from the lab J Foucaud , A Estoup , A. Loiseau , Olivier REY , J. Orivel Heredity, 2010, 105 (2), pp.205-212. ⟨10.1038/hdy.2009.169⟩ Article dans une revue hal-04080683v1
	In defence of model-based inference in phylogeography. Mark A Beaumont , Rasmus Nielsen , Christian P. Robert , Jody Hey , Oscar Gaggiotti Molecular Ecology, 2010, 19 (3), epub ahead of print. ⟨10.1111/j.1365-294X.2009.04515.x⟩ Article dans une revue hal-00450030v1
	Characterization and PCR multiplexing of polymorphic microsatellite loci for the locust Locusta migratoria (vol 5, pg 554, 2005) - corrigendum Marie Pierre Chapuis , Anne Loiseau , Yannis Michalakis , Michel Lecoq , Arnaud Estoup Molecular Ecology Resources, 2010, 10 (4), pp.755-755. ⟨10.1111/j.1755-0998.2010.02870.x⟩ Article dans une revue hal-02663744v1
	Combining genetic, historical and geographical data to reconstruct the dynamics of bioinvasions: application to the cane toad Bufo marinus Arnaud Estoup , Stuart Baird , Nicolas Ray , Mathias Currat , Jean-Marie Cornuet Molecular Ecology Resources, 2010, 10 (5), pp.886-901. ⟨10.1111/j.1755-0998.2010.02882.x⟩ Article dans une revue hal-02658739v1
	Worldwide invasion by the little fire ant: routes of introduction and eco-evolutionary pathways Julien Foucaud , Jérôme Orivel , Anne Loiseau , Jacques H.C. Delabie , Hervé Jourdan Evolutionary Applications, 2010, 3 (4), pp.363-374. ⟨10.1111/j.1752-4571.2010.00119.x⟩ Article dans une revue hal-00550725v1
	In defense of model-based inference in phylogeography M. Beaumont , R. Nielsen , Cédric Robert Robert , J. Hey , O. Gaggiotti Molecular Ecology, 2010, 19 (3), pp.436-446 Article dans une revue hal-00601928v1
	Reconstructing the routes of invasion: what for, how and so what Arnaud Estoup , Thomas Guillemaud Molecular Ecology, 2010, 19 (19), pp.4113-4130. ⟨10.1111/j.1365-294X.2010.04773.x⟩ Article dans une revue hal-02667095v1
	Inferring introduction routes of invasive species using approximate Bayesian computation on microsatellite data Thomas Guillemaud , M.A. Beaumont , Marc Ciosi , Jean-Marie Cornuet , Arnaud Estoup Heredity, 2010, 104 (1), pp.88-99. ⟨10.1038/hdy.2009.92⟩ Article dans une revue hal-02659220v1
	Parental crowding influences life-history traits in Locusta migratoria females Marie Pierre Chapuis , Lucie Crespin , Arnaud Estoup , A. Augé-Sabatier , A. Foucart Bulletin of Entomological Research, 2010, 100 (1), pp.9-17. ⟨10.1017/S0007485309006853⟩ Article dans une revue hal-02660245v1
	IBDSim: a computer program to simulate genotypic data under isolation by distance Raphaël Leblois , Arnaud Estoup , Francois Rousset Molecular Ecology Resources, 2009, 9 (1), pp.107 - 109. ⟨10.1111/j.1755-0998.2008.02417.x⟩ Article dans une revue halsde-00359920v1
	Ecologically heterogeneous populations of the invasive ant Wasmannia auropunctata within its native and introduced ranges. Jérôme Orivel , Julien Grangier , J. Foucaud , Julien Le Breton , F.X. Andrès Ecological Entomology, 2009, 34, pp.504-512 Article dans une revue hal-00429336v1
	Isolation and characterization of microsatellites in the harlequin ladybird Harmonia axyridis (Coleoptera, Coccinellidae) and cross-species amplification within the family Coccinellidae Anne Loiseau , Thibaut Malausa , Eric Lombaert , Jean-Francois Martin , Arnaud Estoup Molecular Ecology Resources, 2009, 9 (3), pp.934-937. ⟨10.1111/j.1755-0998.2009.02517.x⟩ Article dans une revue hal-02657463v1
	Outbreaks, gene flow and effective population size in the migratory locust Locusta migratoria: a regional scale comparative survey Marie Pierre Chapuis , Anne Loiseau , Yannis Michalakis , Michel Lecoq , Alex Franc Molecular Ecology, 2009, 18 (5), pp.792-800. ⟨10.1111/j.1365-294X.2008.04072.x⟩ Article dans une revue hal-02661513v1
	The interplay between genetic and environmental effects on colony insularity in the clonal invasive little fire ant Wasmannia auropunctata Merav Vonshak , Tamar Dayan , Julien Foucaud , Arnaud Estoup , Abraham Hefetz Behavioral Ecology and Sociobiology, 2009, 63 (11), pp.1667-1677. ⟨10.1007/s00265-009-0775-9⟩ Article dans une revue hal-02667829v1
	Origins and genetic diversity of pygmy hunter-gatherers from Western Central Africa. Paul Verdu , Frédéric Austerlitz , Arnaud Estoup , Renaud Vitalis , Myriam Georges Current Biology - CB, 2009, 19 (4), pp.312-8. ⟨10.1016/j.cub.2008.12.049⟩ Article dans une revue hal-00397221v1
	Retracer l'invasion pour mieux la combattre Arnaud Estoup , Thomas Guillemaud Pour la Science. Dossier, 2009, 65, pp.68-70 Article dans une revue hal-02654993v1
	Ecologically heterogeneous populations of the invasive ant Wasmannia auropunctata within its native and introduced ranges Jérôme Orivel , Julien Grangier , Julien Foucaud , Julien Le Breton , François-Xavier Andrès Ecological Entomology, 2009, 34 (3), pp.504-512. ⟨10.1111/j.1365-2311.2009.01096.x⟩ Article dans une revue hal-02658746v1
	Reproductive system, social organization, human disturbance and ecological dominance in native populations of the little fire ant, Wasmannia auropunctata Julien Foucaud , Jérôme Orivel , Denis Fournier , Jacques H.C. Delabie , Anne Loiseau Molecular Ecology, 2009, 18 (24), pp.5059-5073. ⟨10.1111/j.1365-294X.2009.04440.x⟩ Article dans une revue hal-02657403v1
	Genetic variation for parental effects on the propensity to gregarise in Locusta migratoria Marie Pierre Chapuis , Arnaud Estoup , Arnaud Augé-Sabatier , Antoine Foucart , Michel Lecoq BMC Evolutionary Biology, 2008, 8, pp.37. ⟨10.1186/1471-2148-8-37⟩ Article dans une revue hal-02655314v1
	Analysing georeferenced population genetics data with Geneland: a new algorithm to deal with null alleles and a friendly graphical user interface Gilles Guillot , Filipe Santos , Arnaud Estoup Bioinformatics, 2008, 24 (11), pp.1406-1407. ⟨10.1093/bioinformatics/btn136⟩ Article dans une revue hal-01197518v1
	Invasion of Europe by the western corn rootworm, Diabrotica virgifera virgifera: multiple transatlantic introductions with various reductions of genetic diversity Marc Ciosi , J.E. Miller , K.S. Kim , R. Giordano , Arnaud Estoup Molecular Ecology, 2008, 17 (16), pp.3614-3627. ⟨10.1111/j.1365-294X.2008.03866.x⟩ Article dans une revue hal-02662996v1
	Identification of 21 polymorphic microsatellites in the African parasitoid wasp, Psyttalia lounsburyi (Silvestri) (Hymenoptera: Braconidae) M.C. Bon , J. Jones , C. Hurard , Anne Loiseau , Nicolas Ris Molecular Ecology Resources, 2008, 8 (4), pp.930-932. ⟨10.1111/j.1755-0998.2008.02120.x⟩ Article dans une revue hal-02660934v1
	Phenotypic variation in invasive and biocontrol populations of the harlequin ladybird, Harmonia axyridis Eric Lombaert , Thibaut Malausa , Rémi Devred , Arnaud Estoup BioControl, 2008, 53 (1), pp.89-102. ⟨10.1007/s10526-007-9131-z⟩ Article dans une revue hal-02660113v1
	Do outbreaks affect genetic population structure? A worldwide survey in Locusta migratoria, a pest of plagued by microsatellite null alleles Marie Pierre Chapuis , M. Lecoq , A. Michalakis , Anne Loiseau , A. Sword Molecular Ecology, 2008, 17 (16), pp.3640-3653. ⟨10.1111/j.1365-294X.2008.03869.x⟩ Article dans une revue hal-02668387v1
	Eight polymorphic microsatellite loci for the Australian plague locust, Chortoicetes terminifera Marie Pierre Chapuis , Julie-Anne Popple , Stephen J. Simpson , Arnaud Estoup , Jean-Francois Martin Molecular Ecology Resources, 2008, 8 (6), pp.1414-1416. ⟨10.1111/j.1755-0998.2008.02204.x⟩ Article dans une revue hal-02663921v1
	Infering population history with DIY ABC: a user-friendly approach to Approximate Bayesian Computation. Jean-Marie Cornuet , Filipe Santos , Marc A. Beaumont , Christian Robert , Jean-Michel Marin Bioinformatics, 2008, 24 (23), pp.2713-2719. ⟨10.1093/bioinformatics/btn514⟩ Article dans une revue hal-00359624v1
	Spatial genetic structure of a small rodent in a eterogeneous landscape Bertrand Gauffre , A. Estoup , Vincent Bretagnolle , F. Cosson Molecular Ecology, 2008, 17 (21), pp.4619-4629. ⟨10.1111/j.1365-294X.2008.03950.x⟩ Article dans une revue hal-00339298v1
	Microsatellite null alleles and estimation of population differentiation Marie Pierre Chapuis , Arnaud Estoup Molecular Biology and Evolution, 2007, 24 (3), pp.621-631. ⟨10.1093/molbev/msl191⟩ Article dans une revue hal-02667983v1
	Changes in mating system and social structure of the ant Petalomyrmex phylax are associated with range expansion in Cameroon Ambroise Dalecky , Gabriel Debout , Arnaud Estoup , Doyle B. Mckey , Finn Kjellberg Evolution - International Journal of Organic Evolution, 2007, 61 (3), pp.579-595. ⟨10.1111/j.1558-5646.2007.00044.x⟩ Article dans une revue hal-02666531v1
	Sex and clonality in the little fire ant Julien Foucaud , Denis Fournier , Jérôme Orivel , Jacques H.C. Delabie , Anne Loiseau Molecular Biology and Evolution, 2007, 24 (11), pp.2465-2473. ⟨10.1093/molbev/msm180⟩ Article dans une revue hal-02658375v1
	Sex and clonality in the little fire ant. J. Foucaud , D. Fournier , Jérôme Orivel , J.H.C. Delabie , A. Loiseau Molecular Biology and Evolution, 2007, 24, pp.2465-2473 Article dans une revue hal-00263425v1
	Introduction history of Drosophila subobscura in the New World: a microsatellite based survey using ABC methods M. Pascual , Marie Pierre Chapuis , F. Mestres , J. Balanya , R.B. Huey Molecular Ecology, 2007, 16 (15), pp.3069-3083. ⟨10.1111/j.1365-294X.2007.03336.x⟩ Article dans une revue hal-02660845v1
	Polymorphic microsatellite loci isolated from the Atlanto-Mediterranean colonial ascidian Pycnoclavella sp. (Ascidiacea, Tunicata) Rocio Pérez-Portela , Sandra Durán , Arnaud Estoup , Xavier Turon Molecular Ecology Notes, 2006, 6 (2), pp.518-520. ⟨10.1111/j.1471-8286.2006.01304.x⟩ Article dans une revue hal-02658258v1
	A general eco-evolutionary framework for understanding bioinvasions Benoit Facon , Benjamin J. Genton , Jacqui Shykoff , Philippe Jarne , Arnaud Estoup Trends in Ecology & Evolution, 2006, 21 (3), pp.130-135. ⟨10.1016/j.tree.2005.10.012⟩ Article dans une revue hal-02667769v1
	Rare sexual reproduction events in the clonal reproduction system of introduced populations of the little fire ant Julien Foucaud , Hervé Jourdan , Julien Le Breton , Anne Loiseau , Djoël Konghouleux Evolution - International Journal of Organic Evolution, 2006, 60 (8), pp.1646-1657. ⟨10.1111/j.0014-3820.2006.tb00509.x⟩ Article dans une revue hal-02662873v1
	Absence of genetic divergence between western corn rootworms (Coleoptera : Chrysomelidae) resistant and susceptible to control by crop rotation Nicholas Miller , Kyung Seok Kim , Susan T. Ratcliffe , Arnaud Estoup , Denis D. Bourguet Journal of Economic Entomology, 2006, 99 (3), pp.685-690. ⟨10.1093/jee/99.3.685⟩ Article dans une revue hal-02657866v1
	Inference on microsatellite mutation processes in the invasive mite, Varroa destructor, using reversible jump Markov Chain Monte Carlo Jean-Marie Cornuet , M.A. Beaumont , Arnaud Estoup , M. Solignac Theoretical Population Biology, 2006, 69 (2), pp.129-144. ⟨10.1016/j.tpb.2005.07.005⟩ Article dans une revue hal-02668580v1
	Habitat contraction and reduction in population size: Does isolation by distance matter? R. Leblois , A. Estoup , R. Streiff Mol Ecol, 2006, 15, pp.3601-3615 Article dans une revue hal-00174766v1
	Genetics of recent habitat contraction and reduction in population size: does isolation by distance matter? Raphaël Leblois , Arnaud Estoup , Rejane R. Streiff Molecular Ecology, 2006, 15 (12), pp.3601-3615. ⟨10.1111/j.1365-294X.2006.03046.x⟩ Article dans une revue hal-02663496v1
	Clonal reproduction by males and females in the little fire ant Denis Fournier , Arnaud Estoup , Jérôme Orivel , Julien Foucaud , Herve Jourdan Nature, 2005, 435 (7046), pp.1230-1234. ⟨10.1038/nature03705⟩ Article dans une revue hal-02683434v1
	Diabrotica débarqua trois fois (au moins!) Thomas Guillemaud , Nicholas Miller , Arnaud Estoup , Sylvie Derridj , Laurent Lapchin Phytoma la Défense des Végétaux, 2005, 588, pp.41-42 Article dans une revue hal-02682073v1
	Bayesian analysis of an admixture model with mutations and arbitrarily linked markers Laurent Excoffier , Arnaud Estoup , Jean-Marie Cornuet Genetics, 2005, 169 (3), pp.1727-1738. ⟨10.1534/genetics.104.036236⟩ Article dans une revue hal-02683219v1
	Characterization and PCR multiplexing of polymorphic microsatellite loci for the invasive ant Wasmannia auropunctata Denis Fournier , Julien Foucaud , Anne Loiseau , Sandrine Cros-Arteil , Herve Jourdan Molecular Ecology Notes, 2005, 5 (2), pp.239-242. ⟨10.1111/j.1471-8286.2005.00889.x⟩ Article dans une revue hal-02683070v1
	Multiple transatlantic introductions of the western corn rootworm Nicholas Miller , Arnaud Estoup , Stefan Toepfer , Denis D. Bourguet , Laurent Lapchin Science, 2005, 310 (5750), pp.992. ⟨10.1126/science.1115871⟩ Article dans une revue hal-02682039v1
	A spatial statistical model for landscape genetics Gilles Guillot , Arnaud Estoup , Fréderic Mortier , Jean-Francois J.-F. Cosson Genetics, 2005, 170 (3), pp.1261-1280. ⟨10.1534/genetics.104.033803⟩ Article dans une revue hal-02683491v1
	Influence of Spatial and Temporal Heterogeneities on the Estimation of Demographic Parameters in a Continuous Population Using Individual Microsatellite Data Raphaël Leblois , Francois Rousset , Arnaud Estoup Genetics, 2004, 166 (2), pp.1081-1092. ⟨10.1093/genetics/166.2.1081⟩ Article dans une revue halsde-00326841v1
	Influence of Mutational and Sampling Factors on the Estimation of Demographic Parameters in a "Continuous" Population Under Isolation by Distance Raphaël Leblois , Arnaud Estoup , Francois Rousset Molecular Biology and Evolution, 2003, 20 (4), pp.491-502. ⟨10.1093/molbev/msg034⟩ Article dans une revue halsde-00333631v1
	Characterization of nine polymorphic microsatellite loci in the fungus Botrytis cinerea (Ascomycota) Elisabeth Fournier , Tatiana Giraud , Anne Loiseau , Dominique Vautrin , Arnaud A Estoup Molecular Ecology Notes, 2002, 2 (253-259), pp.253-255. ⟨10.1046/j.1471-8278⟩ Article dans une revue hal-02676802v1
	Isolation and characterization of microsatellite loci in the aphid species, Rhopalosiphum padi Jean-Christophe Simon , Nathalie Leterme , François Delmotte , Olivier Martin , Arnaud Estoup Molecular Ecology Notes, 2001, 1 (1-2), pp.4-5. ⟨10.1046/j.1471-8278.2000.00002.x⟩ Article dans une revue hal-02681394v1
	Microsatellite analysis of polyandry and spawning site competition in brown trout (Salmo trutta L.) C.R. Largiader , Arnaud Estoup , Frédéric Lecerf , Alexis Champigneulle , René R. Guyomard Genetics Selection Evolution, 2001, 33 (S1), pp.S205-S222 Article dans une revue hal-02674726v1
	Absence of evidence for isolation by distance in an expanding cane toad ( Bufo marinus ) population: an individual-based analysis of microsatellite genotypes Raphaël Leblois , François Rousset , Dani Tikel , Craig Moritz , Arnaud Estoup Molecular Ecology, 2000, 9 (11), pp.1905-1909. ⟨10.1046/j.1365-294x.2000.01091.x⟩ Article dans une revue hal-02929761v1
	Polymerase chain reaction primers for polymorphic microsatellite loci in the invasive toad species Bufo marinus D. Tikel , D. Paetkau , M. Cortinas , Raphaël Leblois , Craig Moritz Molecular Ecology, 2000, 9 (11), pp.1927-1929. ⟨10.1046/j.1365-294x.2000.01074-6.x⟩ Article dans une revue hal-02929768v1
	New methods employing multilocus genotypes to select or exclude populations as origins of individuals J. M. Cornuet , S. Piry , G. Luikart , A. Estoup , M. Solignac Genetics, 1999, 153, pp.1989-2000 Article dans une revue halsde-00295518v1
	Development and cross-species comparison of microsatellite markers in two lizard species, Lacerta vivipara and Podarcis muralis K. Boudjemadi , Olivier Martin , Jean-Christophe Simon , Arnaud Estoup Molecular Ecology, 1999, 8, pp.518-520 Article dans une revue hal-02694601v1
	Isolation of microsatellite loci in european catfish, Silurus glanis Francine Krieg , Arnaud Estoup , A. Triantafyllidis , René R. Guyomard Molecular Ecology, 1999, 8, pp.1957-1969 Article dans une revue hal-02697798v1
	Juxtaposed microsatellite systems as diagnostic markers for admixture : Theoretical aspects Arnaud Estoup , Jean-Marie Cornuet , François Rousset , René Guyomard Molecular Biology and Evolution, 1999, 16 (7), pp.898-908. ⟨10.1093/oxfordjournals.molbev.a026179⟩ Article dans une revue hal-02688919v1
	Variation of microsatellite size homoplasy across electromorphs, loci, and populations in three invertebrate species Frédérique Viard , Pierre Franck , Marie-Pierre Dubois , Arnaud Estoup , Philippe Jarne Journal of Molecular Evolution, 1998, 47 (1), pp.42-51. ⟨10.1007/PL00006361⟩ Article dans une revue hal-02695581v1
	Density and variability of dinucleotide microsatellites in the parthenogenetic polyploid snail Melanoides tuberculata Sarah Samadi , E. Artiguebielle , Arnaud Estoup , J.P. Pointier , J.F. Silvain Molecular Ecology, 1998, 7, pp.1233-1236 Article dans une revue hal-02697355v1
	Parentage assignment using microsatellites in turbot (Scophthalmus maximus) and rainbow trout (Oncorhynchus mykiss) hatchery populations Arnaud Estoup , Karim Gharbi , M. San Christobal , Claude Chevalet , Pierrick Haffray Canadian Journal of Fisheries and Aquatic Sciences, 1998, 55, pp.715-725 Article dans une revue hal-02697087v1
	The influence of mutation, selection and reproductive systems on microsatellite variability: A simulation approach Sarah Samadi , François Erard , Arnaud Estoup , P. Jarne Genetics Research, 1998, 71, pp.213-222 Article dans une revue hal-02697097v1
	Comparative analysis of microsatellite and allozyme markers: A case study investigating microgeographic differentiation in brown trout (Salmo trutta) Arnaud Estoup , François Rousset , Y. Michalakis , J.M. Cornuet , M. Adriamanga Molecular Ecology, 1998, 7, pp.339-353. ⟨10.1046/j.1365-294x.1998.00362.x⟩ Article dans une revue hal-02685792v1
	Kin recognition in honeybees G. Arnold , B. Quenet , J.M. Cornuet , C. Masson , B. de Schepper Nature, 1996, 379, pp.498 Article dans une revue hal-02693854v1
	Rapid one-tube DNA extraction for reliable PCR dectection of fish polymorphic markers and transgenes. Arnaud Estoup , C.R. Largiader , E. Perrot , Daniel Chourrout Molecular Marine Biology and Biotechnology, 1996, 5 (4), pp.295-298 Article dans une revue hal-02697475v1
	Levels and polyandry and intracolonial genetic relationships in Apis dorsata (Hymenoptera: Apidae) B.P. Oldroyd , A.J. Smolenski , J.M. Cornuet , S. Wongsiri , Arnaud Estoup Annals of the Entomological Society of America, 1996, 89 (2), pp.276-283 Article dans une revue hal-02686503v1
	Genetic differentiation of continental and island populations of Bombus terrestris (Hymenoptera: Apidae) in Europe Arnaud Estoup , M. Solignac , J.M. Cornuet , Jérome Goudet , A. Schöll Molecular Ecology, 1996, 5, pp.19-31 Article dans une revue hal-02696674v1
	Size homoplasy and mutational processes of interrupted microsatellites in two bee species, Apis mellifera and Bombus terrestris (Apidae) Arnaud Estoup , C. Tailliez , J.M. Cornuet , M. Solignac Molecular Biology and Evolution, 1995, 12 (6), pp.1074-1084 Article dans une revue hal-02700456v1
	Levels of polyandry and intracolonial genetic relationships in Apis florea B.P. Oldroyd , A.J. Smolenski , J.M. Cornuet , S. Wongsiri , Arnaud Estoup Behavioral Ecology and Sociobiology, 1995, 37 (5), pp.329-335. ⟨10.1007/BF00174137⟩ Article dans une revue hal-02713140v1
	Unusually high frequency of (CT)n and (GT)n microsatellite loci in a yellowjacket wasp, Vespula rufa (L.) ( Hymenoptera : Vespidae). P.A. Thoren , R.J. Paxton , Arnaud Estoup Insect Molecular Biology, 1995, 4 (3), pp.141-148 Article dans une revue hal-02709147v1
	Monoandry and polyandry in bumble bees (Hymenoptera; Bombinae) as evidenced by highly variable microsatellites. Arnaud Estoup , A. Schöll , A. Pouvreau , M. Solignac Molecular Ecology, 1995, 4, pp.89-93 Article dans une revue hal-02715569v1
	Colony aggregations in Apis mellifera L B Oldroyd , A Smolenski , S Lawler , A Estoup , R Crozier Apidologie, 1995, 26 (2), pp.119-130 Article dans une revue hal-00891252v1
	Microsatellite variation in honey bee (Apis mellifera L.) populations : hierarchical genetic structure and test of the infinite allele and stepwise mutation models Arnaud Estoup , L. Garnery , M. Solignac , J.M. Cornuet Genetics, 1995, 140, pp.679-695 Article dans une revue hal-02705216v1
	Precise assessment of the number of patrilines and of genetic relatedness in honeybee colonies Arnaud Estoup , M. Solignac , J.M. Cornuet Proceedings of the Royal Society B: Biological Sciences, 1994, 258, pp.1-7 Article dans une revue hal-02708180v1
	Diversité et gestion génétique de la truite commune : apport de l'étude du polymorphisme des locus protéiques et microsatellites P Presa , Francine Krieg , A Estoup , R Guyomard Genetics Selection Evolution, 1994, 26 (Suppl1), pp.183s-202s Article dans une revue hal-00894063v1
	Diversite et gestion genetique de la truite commune : apport de l'etude du polymorphisme des locus proteiques et microsatellites P. Presa , Francine Krieg , Arnaud Estoup , René R. Guyomard Genetics Selection Evolution, 1994, 26 (suppl1), pp.183s-202s Article dans une revue hal-02714843v1
	Characterization of (GT)n and (CT)n microsatellites in two insect species: Apis mellifera and Bombus terrestris Arnaud Estoup , M. Solignac , Myriam Harry , J.M. Cornuet Nucleic Acids Research, 1993, 21 (6), pp.1427-1431 Article dans une revue hal-02707427v1
	(CT)n and (GT)n microsatellites : a new class of genetic markers for Salmo trutta L. (brown trout) Arnaud Estoup , P. Presa , Francine Krieg , Daniel Vaiman , René R. Guyomard Heredity, 1993, 71, pp.488-496 Article dans une revue hal-02710475v1

	Macroecological Patterns of Fruit Infestation Rates by the Invasive Fly Drosophila suzukii in the Reservoir Host Plant Sambucus nigra Romain Ulmer , Aude Couty , Patrice Eslin , Lucas Baliteau , Anne Bonis 1st International Electronic Conference on Biological Diversity, Ecology and Evolution, Mar 2021, Sciforum.net, France. pp.9469, ⟨10.3390/BDEE2021-09469⟩ Communication dans un congrès hal-03321977v1
	Prédiction génomique de l'adaptation de Drosophila suzukii à différentes plantes hôtes Simon Boitard , Arnaud Estoup , Mathieu Gautier , Nicolas Rode Journée Intelligence Artificielle et Biodiversité, Labex Cemeb & NUMEV, Mar 2021, Montpellier, France Communication dans un congrès hal-03649525v1
	Rapid evolution of local adaptation to different host fruits in wild D. suzukii populations Laure Olazcuaga , Julien Foucaud , Candice Deschamps , Anne Loiseau , Mathieu Gautier 10th DrosEU Workshop, Instituto Gulbenkian de Ciência, Oeiras, Portugal, Feb 2020, Oeiras, Portugal Communication dans un congrès hal-02978876v1
	Bringing ABC inference to the machine learning realm : AbcRanger, an optimized random forests library for ABC François-David Collin , Arnaud Estoup , Jean-Michel Marin , Louis Raynal JOBIM 2020, Jun 2020, Montpellier, France Communication dans un congrès hal-02910067v2
	Apport de la technologie Oxford NanoPore pour l’assemblage de novo du génome d’espèces non-modèles : le cas de la coccinelle asiatique Harmonia axyridis Jacques Lagnel , Arnaud A Estoup , Cecile Donnadieu , Celine Lopez-Roques , Maxime Manno Journées Ouvertes en Biologie, Informatique et Mathématiques (JOBIM 2018), Société Française de Bio-Informatique (SFBI). FRA. GdR 3003 Bioinformatique Moléculaire (GdR BiM), FRA. Institut Français de Bioinformatique (IFB), FRA. Aix Marseille Université (AMU), FRA. Institut National de la Santé et de la Recherche Médicale (INSERM), FRA. Centre National de la Recherche Scientifique (CNRS), FRA., Jul 2018, Marseille, France Communication dans un congrès hal-02733723v1
	Transposable Element Dynamics in an Invasive Species V. Mérel , Marie Fablet , M. Boulesteix , Arnaud A Estoup , Patricia Gibert Congrès National des Éléments Transposables (CNET 2018), Jul 2018, Clermont-Ferrand, France Communication dans un congrès hal-02786547v1
	Effect of the environment on life-history traits in Drosophila suzukii Laure Olazcuaga , Julien Foucaud , Nicolas O. Rode , Benoit Facon , Virginie Ravigné International Conference on Ecological Sciences (Sfécologie 2018), Oct 2018, Rennes, France. 825 p Communication dans un congrès hal-02735719v1
	Can evolutionary biology help better predict the risks associated with population control using gene drives? Nicolas O. Rode , Arnaud A Estoup , Denis Bourguet , V. Courtier-Orgogozo , Florence Débarre 2. Joint Congress on Evolutionary Biology (EVOLUTION 2018), Aug 2018, Montpellier, France Communication dans un congrès hal-02785305v1
	Apport de la technologie Oxford NanoPore pour l’assemblage de novo du génome d’espèces non-modèles : le cas de la coccinelle asiatique Harmonia axyridis Jacques Lagnel , Arnaud A Estoup , Cecile Donnadieu , Celine Lopez-Roques , Maxime Manno Montpellier Omics days 2018, Université de Montpellier (UM). Montpellier, FRA., Feb 2018, Montpellier, France Communication dans un congrès hal-02737315v1
	Contribution of Oxford NanoPore technology for the de novo genome assembly of nonmodel species: the case of the Asian ladybird Harmonia axyridis Jacques Lagnel , Arnaud A Estoup , Cecile Donnadieu , Celine Lopez-Roques , Maxime Manno Réunion France Génomique, Nov 2018, Evry, France Communication dans un congrès hal-02785309v1
	Oviposition preference and larva performance in natural populations of Drosophila suzukii Laure Olazcuaga , Ruth Hufbauer , Julien Foucaud , Benoit Facon , Aurélien Ausset Annual Meeting of D. suzukii's managment, Centre Technique Interprofessionnel des Fruits et Légumes (CTIFL). FRA., Jun 2017, Bellegarde, France Communication dans un congrès hal-02789374v1
	The evolutionary ecology of invasive pests Ruth Hufbauer , Arnaud A Estoup , Laure Olazcuaga , Julien Foucaud CeMEB Scientific Days, Apr 2017, Montpellier, France Communication dans un congrès hal-02787292v1
	Approximate Bayesian Computation using Random Forest Jean-Michel Marin , Pierre Pudlo , Louis Raynal , Arnaud A Estoup , Christian P. Robert Validating and Expanding Approximate Bayesian Computation Methods (17w5025), Banff International Research Station for Mathematical Innovation and Discovery (BIRS). MEX., Feb 2017, Banff, Canada Communication dans un congrès hal-02786888v1
	Rôle de l’évolution dans la proliferation des espèces Arnaud A Estoup , Ruth Hufbauer Séance de l’Académie d’agriculture de France sur les pullulations d’espèces exotiques ou autochtones. Section 6 « Sciences de la vie », Académie d'Agriculture de France (AAF). Paris, FRA., Mar 2017, Paris, France Communication dans un congrès hal-02787251v1
	Reconstruction des routes d’invasion: nouvelles méthodes génétiques et statistiques appliquées à Drosophila suzukii Arnaud A Estoup Journées Nationales Drosophila Suzukii, Centre Technique Interprofessionnel des Fruits et Légumes (CTIFL). Bellegarde, FRA., Dec 2016, Bellegarde, France Communication dans un congrès hal-02794748v1
	Reconstructing the routes of invasion of Drosophila suzukii by means of ABC random forest Arnaud A Estoup Réunion du réseau sur la durabilité des méthodes de lutte agro-écologique contre les mouches des fruits, Agropolis Fondation. Montpellier, FRA., Sep 2016, Montpellier, France Communication dans un congrès hal-02794751v1
	Invasion genetics of the ladybird Harmonia axyridis Arnaud A Estoup Chinese Academy of Sciences, Chinese Academy of Sciences (CAS). Beijing, CHN., Nov 2015, Beijing, China Communication dans un congrès hal-02797979v1
	Invasion biology: insights from evolutionary biology and population genetics Thomas Guillemaud , Eric Lombaert , Arnaud A Estoup 25. IWGO meeting, Apr 2014, Chicago, United States Communication dans un congrès hal-02794753v1
	Changements évolutifs et bioinvasions Guillaume Laugier , Arnaud Estoup , Gilles Le Moguedec , Benoit Facon 34. Réunion annuelle du Groupe d’Etude de Biologie et Génétique des Populations (Petit Pois Déridé 2012), Aug 2012, Avignon, France. 1 p Communication dans un congrès hal-02745637v1
	Consequences of hybridization between invasive and biocontrol individuals of the harlequin ladybird Harmonia axyridis in France Benoit Facon , Laurent Crespin , Anne Loiseau , Eric Lombaert , Alexandra Magro Meeting IOBC / WPRS “Harmonia axyridis and other ladybirds”, Sep 2009, Engelberg, Switzerland Communication dans un congrès hal-01231284v1
	Inférence bayésienne dans des scénarios évolutifs complexes avec populations mélangées: application à l’abeille domestique Jean-Marie Cornuet , Laurent Excoffier , Pierre Franck , Arnaud Estoup 6. colloque national du BRG, Oct 2006, La Rochelle, France Communication dans un congrès hal-02755949v1
	Génétique des colonies et des populations de Wasmannia auropunctata Arnaud Estoup 2. Colloque de restitution du programme de recherche, Nov 2006, Paris, France Communication dans un congrès hal-02758073v1
	Ecologie et génétique évolutive d’une fourmi envahissante Wasmannia auropunctata Arnaud Estoup 2. Colloque de restitution du programme de recherche, Nov 2006, Paris, France Communication dans un congrès hal-02756220v1
	Inference of demographic parameters under isolation by distance: what can we do now Raphaël Leblois , Maria de Iorio , Robert Griffiths , Arnaud Estoup , François Rousset 2nd International Congress on DNA Polymorphisms in Human Populations, Dec 2003, Paris, France Communication dans un congrès hal-02932438v1
	Diversite et gestion genetique de la truite commune : apport de l'etude du polymorphisme des locus proteiques et microsatellites P. Presa , Francine Krieg , Arnaud Estoup , René R. Guyomard Colloque BRG/INRA. Ressources génétiques animales et végétales. Méthodologies d'étude et de gestion, Sep 1993, Montpellier, France Communication dans un congrès hal-02850884v1

	A user-friendly approach to approximate Bayesian Computation for inference on population history using molecular markers Jean-Marie Cornuet , Filipe de Sousa dos Santos , Arnaud Estoup 2011 Logiciel hal-02810589v1
	FreeNA Marie Pierre Chapuis , Arnaud Estoup 2009 Logiciel hal-02812773v1

	Likelihood-free model choice Jean-Michel Marin , Pierre Pudlo , Arnaud A Estoup , C.P. Robert Handbook of Approximate Bayesian Computation, Chapman and Hall, 678 p., 2019, 9781439881507 Chapitre d'ouvrage hal-02787323v1
	Application of ABC to Infer the Genetic History of Pygmy Hunter-Gatherer Populations from Western Central Africa Arnaud A Estoup , Paul Verdu , Jean-Michel Marin , Christian Robert , Alexandre Dehne Garcia Scott A. Sisson; Yanan Fan; Mark A. Beaumont. Handbook of Approximate Bayesian Computation, Chapman and Hall, Chapter 18, 2019, Chapman & Hall/CRC Handbooks of Modern Statistical Methods, 9781439881507 Chapitre d'ouvrage hal-02787321v1
	Is there a genetic paradox of biological invasion? Arnaud Estoup , Virginie Ravigné , Ruth Hufbauer , Renaud Vitalis , Mathieu Gautier Annual Review of Ecology, Evolution and Systematics, 47, ANNUAL REVIEWS, pp.22, 2016, Annual Review of Ecology, Evolution, and Systematics, 978-0-8243-1447-7. ⟨10.1146/annurev-ecolsys-121415-032116⟩ Chapitre d'ouvrage hal-01608618v1
	Bayesian inference under complex evolutionary scenarios using microsatellite markers: multiple divergence and genetic admixture events in the honey bee, Apis mellifera Jean-Marie Cornuet , Laurent Excoffier , Pierre Franck , Arnaud Estoup Genetic Diversity, Nova Science Publishers, 2009, 9781607411765 Chapitre d'ouvrage hal-02821471v1

	AbcRanger, A fast and scalable random forest library for ABC model choice and parameter estimation F.-D. Collin , A Estoup , Jean-Michel Marin , Louis Raynal JCAD 2019, Oct 2019, Toulouse (FR), France. Poster de conférence hal-04207225v1
	The genome response of Drosophila suzukii during its worldwide invasion Laure Olazcuaga , Anne Loiseau , Nicolas O. Rode , Arnaud A Estoup , Mathieu Gautier DrosEU/ ESEB STN Summer School on Adaptation Genomics, Aug 2018, Montpellier, France. , 2018 Poster de conférence hal-02785219v1
	Investigating the potential specialization of the pest Drosophila suzukii to different host fruits Laure Olazcuaga , Julien Foucaud , Nicolas O. Rode , Benoit Facon , Aurélien Ausset 2. Joint Congress on Evolutionary Biology (EVOLUTION 2018), Aug 2018, Montpellier, France. 2018 Poster de conférence hal-02788407v1
	lnvestigating the potential specialization of the pest Drosophila suzukii to different host fruits Laure Olazcuaga , Julien Foucaud , Nicolas O. Rode , Aurélien Ausset , Nicolas Leménager Joint Congress on Evolutionary Biology, Aug 2018, Montpellier, France. , 1 p., 2018 Poster de conférence hal-02787201v1

	Comment la coccinelle arlequin dessine-t-elle ses points rouges ou ses points noirs ? Arnaud A Estoup , Mathieu Gautier , B. Prud’homme 2018, 1 p Autre publication scientifique hal-02789608v1
	La recette génétique des pois rouges ou noirs de la coccinelle Arnaud A Estoup , Mathieu Gautier , B. Prud’homme 2018, 1 p Autre publication scientifique hal-02786767v1

	Du génotype au phénotype : les motifs des coccinelles arlequins Mathieu Gautier , Benjamin Prud’homme , Junichi Yamaguchi , Arnaud A Estoup Ressources en sciences de la vie pour les enseignants, 2018 Article de blog scientifique hal-02787178v1
	En rouge et noir, la génétique des pois de la coccinelle / In red and black, the genetics of ladybug spots Arnaud A Estoup , B. Prud’homme , J. Yamaguchi , Mathieu Gautier 2018 Article de blog scientifique hal-02618159v1

	How do invasion syndromes evolve? An experimental evolution approach using the ladybird Harmonia axyridis Julien Foucaud , Ruth Hufbauer , Virginie Ravigné , Laure Olazcuaga , Anne Loiseau 2020 Pré-publication, Document de travail hal-02564852v1
	The genomic basis of colour pattern polymorphism in the harlequin ladybird Mathieu Gautier , Junichi Yamaguchi , Julien Foucaud , Anne Loiseau , Aurélien Ausset 2020 Pré-publication, Document de travail hal-02791082v1

Arnaud Estoup

Publications

Rapid and transient evolution of local adaptation to seasonal host fruits in an invasive pest fly

Macroecological patterns of fruit infestation rates by the invasive fly Drosophila suzukii in the wild reservoir host plant Sambucus nigra

ƒ‐statistics estimation and admixture graph construction with Pool‐Seq or allele count data using the R package poolfstat

Extending Approximate Bayesian Computation with Supervised Machine Learning to infer demographic history from genetic polymorphisms using DIYABC Random Forest

The Worldwide Invasion of Drosophila suzukii Is Accompanied by a Large Increase of Transposable Element Load and a Small Number of Putatively Adaptive Insertions

Adaptation and correlated fitness responses over two time scales in Drosophila suzukii populations evolving in different environments

A whole-genome scan for association with invasion success in the fruit fly Drosophila suzukii using contrasts of allele frequencies corrected for population structure

A young age of subspecific divergence in the desert locust Schistocerca gregaria , inferred by ABC Random Forest

Near-chromosome level genome assembly of the fruit pest Drosophila suzukii using long-read sequencing

Oviposition Preference and Larval Performance of Drosphila suzukii (Diptera: Drosophilidae), Spotted-Wing Drosophila: Effects of Fruit Identity and Composition

Population management using gene drive: molecular design, models of spread dynamics and assessment of ecological risks

ABC random forests for Bayesian parameter inference

The taste of origin in a lady beetle: do males discriminate between females based on cuticular hydrocarbons?

Cuticular hydrocarbon composition does not allow Harmonia axyridis males to identify the mating status of sexual partners

The Genomic Basis of Color Pattern Polymorphism in the Harlequin Ladybird

Model choice using Approximate Bayesian Computation and Random Forests: analyses based on model grouping to make inferences about the genetic history of Pygmy human populations

Mating Status Influences Cold Tolerance and Subsequent Reproduction in the Invasive Ladybird Harmonia axyridis

A valuable work lying at the crossroad of neuro-ethology, evolution and ecology in the fruit pest Drosophila suzukii

Deciphering the Routes of invasion of Drosophila suzukii by Means of ABC Random Forest.

Genetic structure and invasion history of the house mouse (Mus musculus domesticus) in Senegal, West Africa: a legacy of colonial and contemporary times.

Reliable ABC model choice via random forests

Reduced population size can induce quick evolution of inbreeding depression in the invasive ladybird Harmonia axyridis

The harlequin ladybird, Harmonia axyridis: global perspectives on invasion history and ecology

Modeling spatial expansion of invasive alien species: relative contributions of environmental and anthropogenic factors to the spreading of the harlequin ladybird in France

Biological invasion and biological control select for different life histories

New set of microsatellite markers for the spotted-wing Drosophila suzukii (Diptera: Drosophilidae): a promising molecular tool for inferring the invasion history of this major insect pest

Evolutionary ecology of microsporidia associated with the invasive ladybird Harmonia axyridis

Complementarity of statistical treatments to reconstruct worldwide routes of invasion: the case of the Asian ladybird Harmonia axyridis

Cannibalism in invasive, native and biocontrol populations of the harlequin ladybird

Invasion genetics of a human commensal rodent: the black rat Rattus rattus in Madagascar

Rapid increase in dispersal during range expansion in the invasive ladybird Harmonia axyridis

DIYABC v2.0: a software to make approximate Bayesian computation inferences about population history using single nucleotide polymorphism, DNA sequence and microsatellite data.

Thermotolerance adaptation to human-modified habitats occurs in the native range of the invasive ant Wasmannia auropunctata before long-distance dispersal

Invasion genetics of the introduced black rat (Rattus rattus) in Senegal, West Africa

Androgenesis is a maternal trait in the invasive ant Wasmannia auropunctata

Distribution of endosymbiotic reproductive manipulators reflects invasion process and not reproductive system polymorphism in the little fire ant Wasmannia auropunctata

Investigating the genetic load of an emblematic invasive species: the case of the invasive harlequin ladybird Harmonia axyridis

The effect of RAD allele dropout on the estimation of genetic variation within and between populations.

Increase in Male Reproductive Success and Female Reproductive Investment in Invasive Populations of the Harlequin Ladybird Harmonia axyridis

Estimation of population allele frequencies from next-generation sequencing data: pool-versus individual-based genotyping.

Evolution in biocontrol strains: insight from the harlequin ladybird Harmonia axyridis

Anthropogenically induced adaptation to invade (AIAI) : Contemporary adaptation to human-altered habitats within the native range can promote invasions

Estimation of demo-genetic model probabilities with Approximate Bayesian Computation using linear discriminant analysis on summary statistics.

Histoires de rencontres amoureuses

Current distribution and population dynamics of the little fire ant supercolony in Cameroon

Where do adaptive shifts occur during invasion? A multidisciplinary approach to unravelling cold adaptation in a tropical ant species invading the Mediterranean area

Inbreeding depression is purged in the invasive insect Harmonia axyridis

Can things get worse when an invasive species hybridizes? The harlequin ladybird Harmonia axyridis in France as a case study

The global spread of Harmonia axyridis (Coleoptera: Coccinellidae): distribution, dispersal and routes of invasion

Stratified dispersal and increasing genetic variation during the invasion of central Europe by the western corn rootworm, [i]Diabrotica virgifera virgifera[/i]

Biological invasions in agricultural settings: insights from evolutionary biology and population genetics

Meiotic Recombination Dramatically Decreased in Thelytokous Queens of the Little Fire Ant and Their Sexually Produced Workers

Ecological genetics of invasive alien species

Experimental evidence for the phenotypic impact of admixture between wild and biocontrol Asian ladybird (Harmonia axyridis) involved in the European invasion

Inferring the origin of populations introduced from a genetically structured native range by approximate Bayesian computation: case study of the invasive ladybird Harmonia axyridis

Characterization of polymorphic microsatellite loci in the neotropical plant ant allomerus decemarticulatus (Formicidae: Myrmicinae) and multiplexing with other microsatellites from the ant subfamily Myrmicinae

Inference on population history and model checking using DNA sequence and microsatellite data with the software DIYABC (v1.0)

Bridgehead effect in the worldwide invasion of the biocontrol Harlequin Ladybird

Thelytokous parthenogenesis, male clonality and genetic caste determination in the little fire ant: new evidence and insights from the lab

In defence of model-based inference in phylogeography.

Characterization and PCR multiplexing of polymorphic microsatellite loci for the locust Locusta migratoria (vol 5, pg 554, 2005) - corrigendum

Combining genetic, historical and geographical data to reconstruct the dynamics of bioinvasions: application to the cane toad Bufo marinus

Worldwide invasion by the little fire ant: routes of introduction and eco-evolutionary pathways

In defense of model-based inference in phylogeography

Reconstructing the routes of invasion: what for, how and so what

Inferring introduction routes of invasive species using approximate Bayesian computation on microsatellite data

Parental crowding influences life-history traits in Locusta migratoria females

IBDSim: a computer program to simulate genotypic data under isolation by distance

Ecologically heterogeneous populations of the invasive ant Wasmannia auropunctata within its native and introduced ranges.

Isolation and characterization of microsatellites in the harlequin ladybird Harmonia axyridis (Coleoptera, Coccinellidae) and cross-species amplification within the family Coccinellidae

Outbreaks, gene flow and effective population size in the migratory locust Locusta migratoria: a regional scale comparative survey

The interplay between genetic and environmental effects on colony insularity in the clonal invasive little fire ant Wasmannia auropunctata

Origins and genetic diversity of pygmy hunter-gatherers from Western Central Africa.

Retracer l'invasion pour mieux la combattre

Ecologically heterogeneous populations of the invasive ant Wasmannia auropunctata within its native and introduced ranges

Reproductive system, social organization, human disturbance and ecological dominance in native populations of the little fire ant, Wasmannia auropunctata

Genetic variation for parental effects on the propensity to gregarise in Locusta migratoria

Analysing georeferenced population genetics data with Geneland: a new algorithm to deal with null alleles and a friendly graphical user interface