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Elastic Energy and Phase Structure in a Continuous Spin Ising Chain with Applications to the Protein Folding Problem

Maxim N. Chernodub , Martin Lundgren , Antti J. Niemi
Physical Review E : Statistical, Nonlinear, and Soft Matter Physics, 2011, 83, pp.011126. ⟨10.1103/PhysRevE.83.011126⟩
Article dans une revue hal-00512014v1

Aspects of structural landscape of human islet amyloid polypeptide

Antti J. Niemi
Journal of Chemical Physics, 2015, pp.10. ⟨10.1063/1.4905586⟩
Article dans une revue hal-01174181v1

Topological Solitons and Folded Proteins

Maxim N. Chernodub , Shuangwei Hu , Antti J. Niemi
Physical Review E : Statistical, Nonlinear, and Soft Matter Physics, 2010, 82 (1), pp.011916. ⟨10.1103/PhysRevE.82.011916⟩
Article dans une revue hal-00466540v1

A comparison of reduced coordinate sets for describing protein structure

Konrad Hinsen , Shuangwei Hu , Gerald R. Kneller , Antti J. Niemi
Journal of Chemical Physics, 2013, 139 (12), pp.124115. ⟨10.1063/1.4821598⟩
Article dans une revue hal-01528424v1

Long range correlations and folding angle with applications to α-helical proteins

Andrey Krokhotin , Stam Nicolis , Antti J. Niemi
Journal of Chemical Physics, 2014, 140 (9), ⟨10.1063/1.4865933⟩
Article dans une revue hal-01782303v1