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The Impact of Specialized Corpora for Word Embeddings in Natural Langage Understanding.

Antoine Neuraz , Bastien Rance , Nicolas Garcelon , Leonardo Campillos Llanos , Anita Burgun , et al.
Studies in Health Technology and Informatics, 2020, 270, pp.432-436. ⟨10.3233/SHTI200197⟩
Article dans une revue hal-03476839v1

Next generation phenotyping using narrative reports in a rare disease clinical data warehouse

Nicolas Garcelon , Antoine Neuraz , Rémi Salomon , Nadia Bahi-Buisson , Jeanne Amiel , et al.
Orphanet Journal of Rare Diseases, 2018, 13 (1), pp.85. ⟨10.1186/s13023-018-0830-6⟩
Article dans une revue hal-03868336v1
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Observational study of haloperidol in hospitalized patients with COVID-19

Nicolas Hoertel , Marina Sánchez-Rico , Raphaël Vernet , Anne-Sophie Jannot , Antoine Neuraz , et al.
PLoS ONE, 2021, 16 (2), pp.e0247122. ⟨10.1371/journal.pone.0247122⟩
Article dans une revue hal-03148564v1
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Diagnosis support systems for rare diseases: a scoping review

Carole Faviez , Xiaoyi Chen , Nicolas Garcelon , Antoine Neuraz , Bertrand Knebelmann , et al.
Orphanet Journal of Rare Diseases, 2020, 15 (1), pp.94. ⟨10.1186/s13023-020-01374-z⟩
Article dans une revue hal-02570643v1

Safety and cost effectiveness of supervised ambulatory drug provocation tests in children with mild non‐immediate reactions to beta‐lactams

Ariane Jaoui , Delphine Delalande , Souha Siouti , Grégoire Benoist , Edouard Sève , et al.
Allergy, 2019, 74 (12), pp.2482-2484. ⟨10.1111/all.13871⟩
Article dans une revue hal-03887255v1

International comparisons of laboratory values from the 4CE collaborative to predict COVID-19 mortality

Griffin Weber , Chuan Hong , Zongqi Xia , Nathan Palmer , Paul Avillach , et al.
npj Digital Medicine, 2022, 5 (1), pp.74. ⟨10.1038/s41746-022-00601-0⟩
Article dans une revue hal-03886991v1

Improving early diagnosis of rare diseases using Natural Language Processing in unstructured medical records: an illustration from Dravet syndrome

Tommaso Lo Barco , Mathieu Kuchenbuch , Nicolas Garcelon , Antoine Neuraz , Rima Nabbout
Orphanet Journal of Rare Diseases, 2021, 16 (1), pp.309. ⟨10.1186/s13023-021-01936-9⟩
Article dans une revue hal-03887075v1
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The Epidemiology of Patients' Email Addresses in a French University Hospital: Case-Control Study

Vincent Looten , Antoine Neuraz , Nicolas Garcelon , Anita Burgun , Gilles Chatellier , et al.
Journal of Medical Internet Research, 2021, 23 (2), pp.e13992. ⟨10.2196/13992⟩
Article dans une revue hal-03476768v1

Do You Need Embeddings Trained on a Massive Specialized Corpus for Your Clinical Natural Language Processing Task?

Antoine Neuraz , Vincent Looten , Bastien Rance , Nicolas Daniel , Nicolas Garcelon , et al.
17th World Congress on Medical and Health Informatics (MEDINFO), MCO Congress Group, Aug 2019, Lyon, France. pp.1558-1559, ⟨10.3233/SHTI190533⟩
Communication dans un congrès hal-03887246v1

A report on the large measles outbreak in Lyon, France, 2010 to 2011.

C Huoi , J Casalegno , T Bénet , A Neuraz , G Billaud , et al.
Euro surveillance : bulletin européen sur les maladies transmissibles = European communicable disease bulletin, 2012, 17 (36), pp.20264
Article dans une revue hal-03335322v1
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What is best for Spoken Language Understanding: Small but Task-dependant Embeddings or Huge but Out-of-domain Embeddings?

Sahar Ghannay , Antoine Neuraz , Sophie Rosset
45th International Conference on Acoustics, Speech, and Signal Processing (ICASSP 2020), May 2020, Barcelona, Spain. pp.8114-8118, ⟨10.1109/ICASSP40776.2020.9053278⟩
Communication dans un congrès hal-02503694v1
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What can millions of laboratory test results tell us about the temporal aspect of data quality? Study of data spanning 17 years in a clinical data warehouse

Vincent Looten , Liliane Kong Win Chang , Antoine Neuraz , Marie-Anne Landau-Loriot , Benoit Vedie , et al.
Computer Methods and Programs in Biomedicine, 2019, 181, pp.1-20. ⟨10.1016/j.cmpb.2018.12.030⟩
Article dans une revue hal-01978796v1

Adalimumab therapy in pediatric Crohn’s Disease: a two-year follow-up comparing ‘top-down’ and ‘step-up’ strategies.

Elise Payen , Antoine Neuraz , Letizia Zenzeri , Cécile Talbotec , Elie Abi Nader , et al.
Journal of Pediatric Gastroenterology and Nutrition, 2022, Publish Ahead of Print, ⟨10.1097/MPG.0000000000003643⟩
Article dans une revue hal-03886928v1

SurvMaximin: Robust federated approach to transporting survival risk prediction models

Xuan Wang , Harrison G. Zhang , Xin Xiong , Chuan Hong , Griffin M. Weber , et al.
Journal of Biomedical Informatics, 2022, 134, ⟨10.1016/j.jbi.2022.104176⟩
Article dans une revue hal-03834307v1
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Criteria for the Regression of Pediatric Mastocytosis: A Long-Term Follow-Up

Laura Polivka , Julien Rossignol , Antoine Neuraz , Djiba Condé , Julie Agopian , et al.
Journal of Allergy and Clinical Immunology: In Practice, 2021, 9 (4), pp.1695-1704.e5. ⟨10.1016/j.jaip.2020.12.019⟩
Article dans une revue hal-03476810v1

Hydroxyzine Use and Mortality in Patients Hospitalized for COVID-19: A Multicenter Observational Study

Marina Sánchez-Rico , Frédéric Limosin , Raphaël Vernet , Nathanaël Beeker , Antoine Neuraz , et al.
Journal of Clinical Medicine, 2021, 10 (24), pp.5891. ⟨10.3390/jcm10245891⟩
Article dans une revue hal-03887044v1
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Association between benzodiazepine receptor agonist use and mortality in patients hospitalised for COVID-19: a multicentre observational study

N. Hoertel , M. Sánchez-Rico , E. Gulbins , J. Kornhuber , R. Vernet , et al.
Epidemiology and Psychiatric Sciences, 2022, 31, pp.e18. ⟨10.1017/S2045796021000743⟩
Article dans une revue hal-03747096v1

Evaluating the Impact of Text Duplications on a Corpus of More than 600,000 Clinical Narratives in a French Hospital.

William Digan , Maxime Wack , Vincent Looten , Antoine Neuraz , Anita Burgun , et al.
Studies in Health Technology and Informatics, 264, pp.103-107, 2019, ⟨10.3233/SHTI190192⟩
Proceedings/Recueil des communications hal-03887250v1

Inherited and Acquired Decrease in Complement Receptor 1 (CR1) Density on Red Blood Cells Associated with High Levels of Soluble CR1 in Alzheimer’s Disease

Rachid Mahmoudi , Sarah Feldman , Aymric Kisserli , Valérie Duret , Thierry Tabary , et al.
International Journal of Molecular Sciences, 2018, 19 (8), pii: E2175. ⟨10.3390/ijms19082175⟩
Article dans une revue inserm-01851070v1
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Improving early diagnosis of rare diseases using Natural Language Processing in unstructured medical records: an illustration from Dravet syndrome

Tommaso Lo Barco , Mathieu Kuchenbuch , Nicolas Garcelon , Antoine Neuraz , Rima Nabbout
Orphanet Journal of Rare Diseases, 2021, 16 (1), ⟨10.1186/s13023-021-01936-9⟩
Article dans une revue hal-03288000v1
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Phenome-Wide Association Studies on a Quantitative Trait: Application to TPMT Enzyme Activity and Thiopurine Therapy in Pharmacogenomics

Antoine Neuraz , Laurent Chouchana , Georgia Malamut , Christine Le Beller , Denis Roche , et al.
PLoS Computational Biology, 2013, 9 (12), pp.e1003405. ⟨10.1371/journal.pcbi.1003405⟩
Article dans une revue inserm-02150166v1
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Lessons Learned from the Usability Evaluation of a Simulated Patient Dialogue System

Leonardo Campillos-Llanos , Catherine Thomas , Éric Bilinski , Antoine Neuraz , Sophie Rosset , et al.
Journal of Medical Systems, 2021, 45 (7), ⟨10.1007/s10916-021-01737-4⟩
Article dans une revue hal-03452553v1

Natural Language Processing for Rapid Response to Emergent Diseases: Case Study of Calcium Channel Blockers and Hypertension in the COVID-19 Pandemic

Antoine Neuraz , Ivan Lerner , William Digan , Nicolas Paris , Rosy Tsopra , et al.
Journal of Medical Internet Research, 2020, 22 (8), pp.e20773. ⟨10.2196/20773⟩
Article dans une revue hal-03738905v1

Evolving phenotypes of non-hospitalized patients that indicate long COVID

Hossein Estiri , Zachary Strasser , Gabriel Brat , Yevgeniy Semenov , Chirag Patel , et al.
BMC Medicine, 2021, 19 (1), pp.249. ⟨10.1186/s12916-021-02115-0⟩
Article dans une revue hal-03476717v1

International Changes in COVID-19 Clinical Trajectories Across 315 Hospitals and 6 Countries: Retrospective Cohort Study

Griffin Weber , Harrison Zhang , Sehi L'Yi , Clara-Lea Bonzel , Chuan Hong , et al.
Journal of Medical Internet Research, 2021, 23 (10), pp.e31400. ⟨10.2196/31400⟩
Article dans une revue hal-03476723v1

Hydroxychloroquine with or without azithromycin and in-hospital mortality or discharge in patients hospitalized for COVID-19 infection: a cohort study of 4,642 in-patients in France

Emilie Sbidian , Julie Josse , Guillaume Lemaître , Imke Mayer , Melodie Bernaux , et al.
2020
Pré-publication, Document de travail hal-02995319v1
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Hydroxyzine Use and Mortality in Patients Hospitalized for COVID-19: A Multicenter Observational Study

Marina Sánchez-Rico , Frédéric Limosin , Raphaël Vernet , Nathanaël Beeker , Antoine Neuraz , et al.
Journal of Clinical Medicine, 2021, 10 (24), pp.5891. ⟨10.3390/jcm10245891⟩
Article dans une revue hal-03519439v1

A clinician friendly data warehouse oriented toward narrative reports: Dr. Warehouse

Nicolas Garcelon , Antoine Neuraz , Rémi Salomon , Hassan Faour , Vincent Benoit , et al.
Journal of Biomedical Informatics, 2018, 80, pp.52-63. ⟨10.1016/j.jbi.2018.02.019⟩
Article dans une revue hal-03865704v1

A Comprehensive Analysis of Immune Constituents in Blood and Bronchoalveolar Lavage Allows Identification of an Immune Signature of Severe Asthma in Children

Karine Adel-Patient , Marta Grauso , Rola Abou-Taam , Blanche Guillon , Céline Dietrich , et al.
Frontiers in Immunology, 2021, 12 (12), pp.1071-1077. ⟨10.3389/fimmu.2021.700521⟩
Article dans une revue hal-03887070v1
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Dexamethasone Use and Mortality in Hospitalized Patients with Coronavirus Disease 2019: a Multicenter Retrospective Observational Study

Nicolas Hoertel , Marina Sánchez-Rico , Raphaël Vernet , Nathanaël Beeker , Antoine Neuraz , et al.
British Journal of Clinical Pharmacology, 2021, 87 (10), pp.3766-3775. ⟨10.1111/bcp.14784⟩
Article dans une revue hal-03463231v1