Number of documents

24


Journal articles9 documents

  • Gautier Richard, Fabrice Legeai, Nathalie Prunier-Leterme, Anthony Bretaudeau, Denis Tagu, et al.. Dosage compensation and sex-specific epigenetic landscape of the X chromosome in the pea aphid.. Epigenetics & Chromatin, BioMed Central, 2017, 10 (1), pp.1-17. ⟨10.1186/s13072-017-0137-1⟩. ⟨hal-01555242⟩
  • Anaïs Gouin, Anthony Bretaudeau, Kiwoong Nam, Sylvie Gimenez, Jean-Marc Aury, et al.. Two genomes of highly polyphagous lepidopteran pests (Spodoptera frugiperda, Noctuidae) with different host-plant ranges. Scientific Reports, Nature Publishing Group, 2017, 7 (1), pp.1-12. ⟨10.1038/s41598-017-10461-4⟩. ⟨hal-01633879⟩
  • Fabrice Legeai, Sylvie Gimenez, Bernard Duvic, Jean-Michel Escoubas, Anne-Sophie Gosselin Grenet, et al.. Establishment and analysis of a reference transcriptome for Spodoptera frugiperda. BMC Genomics, BioMed Central, 2014, 15 (1), pp.704. ⟨10.1186/1471-2164-15-704⟩. ⟨hal-01058982⟩
  • Anthony Bretaudeau, Cyril Monjeaud, Yvan Le Bras, Fabrice Legeai, Olivier Collin. BioMAJ2Galaxy: automatic update of reference data in Galaxy using BioMAJ. GigaScience, BioMed Central, 2014, 4, pp.22. ⟨10.1186/s13742-015-0063-8⟩. ⟨hal-01240449⟩
  • Marion Ouedraogo, Charles Bettembourg, Anthony Bretaudeau, Olivier Sallou, Christian Diot, et al.. The duplicated genes database: identification and functional annotation of co-localised duplicated genes across genomes. PLoS ONE, Public Library of Science, 2012, 7 (11), pp.e50653. ⟨10.1371/journal.pone.0050653⟩. ⟨hal-00841104⟩
  • Stéphane Mahé, Marie Duhamel, Thomas Le Calvez, Laëtitia Guillot, Ludmila Sarbu, et al.. PHYMYCO-DB: A Curated Database for Analyses of Fungal Diversity and Evolution. PLoS ONE, Public Library of Science, 2012, 7 (9), pp.e43117. ⟨10.1371/journal.pone.0043117⟩. ⟨hal-00756250⟩
  • Olivier Sallou, Anthony Bretaudeau, Aurelien Roult. Seqcrawler: biological data indexing and browsing platform.. BMC Bioinformatics, BioMed Central, 2012, 13 (1), pp.175. ⟨10.1186/1471-2105-13-175⟩. ⟨hal-00728279⟩
  • Anthony Bretaudeau, François Coste, Florian Humily, Laurence Garczarek, Gildas Le Corguillé, et al.. CyanoLyase: a database of phycobilin lyase sequences, motifs and functions. Nucleic Acids Research, Oxford University Press, 2012, pp.6. ⟨10.1093/nar/gks1091⟩. ⟨hal-01094087⟩
  • Frédéric Lecerc, Anthony Bretaudeau, Olivier Sallou, Colette Désert, Yuna Blum, et al.. AnnotQTL: a new tool to gather functional and comparative information on a genomic region. Nucleic Acids Research, Oxford University Press, 2011, open access. ⟨10.1093/nar/gkr361⟩. ⟨hal-00597398⟩

Conference papers7 documents

  • Xavier Garnier, Anthony Bretaudeau, Olivier Filangi, Fabrice Legeai, Anne Siegel, et al.. AskOmics, a web tool to integrate and query biological data using semantic web technologies. JOBIM 2017 - Journées Ouvertes en Biologie, Informatique et Mathématiques, Jul 2017, Lille, France. pp.1. ⟨hal-01577425⟩
  • Fabrice Legeai, Charles Bettembourg, Anthony Bretaudeau, Yvanne Chaussin, Olivier Dameron, et al.. BIPAA/Askomics, a new and easy approach for querying genomics and epigenomics elements in interaction. XXVth International Congress of Entomology 2016, Sep 2016, Orlando, Florida, United States. ⟨hal-01391080⟩
  • Charles Bettembourg, Olivier Dameron, Anthony Bretaudeau, Fabrice Legeai. AskOmics : Intégration et interrogation de réseaux de régulation génomique et post-génomique. IN OVIVE (INtégration de sources/masses de données hétérogènes et Ontologies, dans le domaine des sciences du VIVant et de l’Environnement), Jun 2015, Rennes, France. pp.7. ⟨hal-01184903⟩
  • Anthony Bretaudeau, Yvan Le Bras, Cyril Monjeaud, Olivier Collin. Automatic update of reference data in Galaxy using BioMAJ.. Galaxy Day 2014, Institut Français de Bioinformatique, Dec 2014, Paris, France. ⟨hal-01102421⟩
  • Yvan Le Bras, Aurélien Roult, Cyril Monjoeaud, Bahin Mathieu, Olivier Quenez, et al.. Towards a Life Sciences Virtual Research Environment. JOBIM 2013 - Journées Ouvertes en Biologie, Informatique et Mathématiques, Jul 2013, Toulouse, France. ⟨hal-01102438⟩
  • Anthony Bretaudeau, Olivier Dameron, Fabrice Legeai, Yvan Rahbé. AphidAtlas : avancées récentes. BAPOA 2013 MOP, Oct 2013, Montpellier, France. ⟨hal-00913155⟩
  • Anthony Bretaudeau, Olivier Sallou, Olivier Collin. Hadoopizer : a cloud environment for bio-informatics data analysis. journées scientifiques mésocentres et France Grilles 2012, Oct 2012, Paris, France. ⟨hal-00766066⟩

Poster communications8 documents

  • Aurélie Evrard, Charles Bettembourg, Olivier Dameron, Olivier Filangi, Anthony Bretaudeau, et al.. Comparative genomic analysis of Clubroot resistance in the Brassicaceae family. Brassica2016, Oct 2016, Melbourne, Australia. ⟨http://brassica2016.com/⟩. ⟨hal-01391707⟩
  • Aurélie Evrard, Charles Bettembourg, Mélanie Jubault, Olivier Dameron, Olivier Filangi, et al.. Integration and query of biological datasets with Semantic Web technologies: AskOmics. Journées Ouvertes Biologie, Informatique et Mathématiques (JOBIM 2016), Jun 2016, Lyon, France. ⟨hal-01391087⟩
  • Anaïs Gouin, Anthony Bretaudeau, Emmanuelle d'Alençon, Claire Lemaitre, Fabrice Legeai. Improvement of the assembly of heterozygous genomes of non-model organisms. Genome Informatics, Oct 2015, Cold Spring Harbor Laboratory, United States. 2015. ⟨hal-01231793⟩
  • Anaïs Gouin, Anthony Bretaudeau, K Labadie, Jean-Marc Aury, Emmanuelle d'Alençon, et al.. Improvement of the assembly of heterozygous genomes of non-model organisms, a case study of the genomes of two Spodoptera frugiperda host strains. Arthropod Genomics 2015, Jun 2015, Manhattan (Kansas), United States. 2015. ⟨hal-01240443⟩
  • Yvan Le Bras, Aurélien Roult, Cyril Monjoeaud, Bahin Mathieu, Olivier Quenez, et al.. e-Science in France, a Life science Western story. Galaxy Community Conference (GCC2014), Jun 2014, Baltimore, United States. ⟨hal-01102432⟩
  • Anaïs Gouin, Anthony Bretaudeau, Claire Lemaitre, Fabrice Legeai. Identification and correction of genome mis-assemblies due to heterozygosity. European Conference on Computational Biology (ECCB), Sep 2014, Strasbourg, France. ECCB 2014, 2014. ⟨hal-01092959⟩
  • Anthony Bretaudeau, Olivier Collin. Dr Motifs: a web resource for pattern matching and discovery. JOBIM 2012, Jul 2012, Rennes, France. ⟨hal-01102439⟩
  • Frédéric Lecerf, Anthony Bretaudeau, Olivier Sallou, Colette Désert, Yuna Blum, et al.. AnnotQTL: a new tool to gather functional and comparative information on a genomic region. 12è Journées Ouvertes en Biologie, Informatique et Mathématiques, Jun 2011, Paris, France. 2011. ⟨hal-01102407⟩