Researcher identifiers

  • IdHAL : annie-chateau

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Number of documents

14

Publications of Annie Duchateau


Institut de Biologie Computationnelle   

Journal articles4 documents

  • Kleber Padovani de Souza, João Carlos Setubal, André Carlos Ponce de Leon F. de Carvalho, Guilherme Oliveira, Annie Chateau, et al.. Machine learning meets genome assembly. Briefings in Bioinformatics, Oxford University Press (OUP), 2018, pp.bby072. ⟨10.1093/bib/bby072⟩. ⟨lirmm-02067457⟩
  • Mathias Weller, Annie Chateau, Rodolphe Giroudeau, Jean-Claude König, Valentin Pollet. On Residual Approximation in Solution Extension Problems. Journal of Combinatorial Optimization, Springer Verlag, 2018, 36 (4), pp.1195-1220. ⟨10.1007/s10878-017-0202-5⟩. ⟨lirmm-01889394⟩
  • Mathias Weller, Annie Chateau, Rodolphe Giroudeau. Exact approaches for scaffolding. BMC Bioinformatics, BioMed Central, 2015, pp.S2. ⟨10.1186/1471-2105-16-S14-S2⟩. ⟨lirmm-01219627⟩
  • Yoann Anselmetti, Vincent Berry, Cedric Chauve, Annie Chateau, Eric Tannier, et al.. Ancestral gene synteny reconstruction improves extant species scaffolding. BMC Genomics, BioMed Central, 2015, 16 (Suppl 10), pp.S11. ⟨10.1186/1471-2164-16-S10-S11⟩. ⟨hal-01180303v2⟩

Conference papers10 documents

  • Dorine Tabary, Tom Davot, Mathias Weller, Annie Chateau, Rodolphe Giroudeau. New Results About the Linearization of Scaffolds Sharing Repeated Contigs. COCOA: Conference on Combinatorial Optimization and Applications, Sep 2018, Atlanta, GA, United States. pp.94-107, ⟨10.1007/978-3-030-04651-4_7⟩. ⟨lirmm-01900389v2⟩
  • Tom Davot, Annie Chateau, Rodolphe Giroudeau, Mathias Weller. On the hardness of approximating Linearization of Scaffolds sharing Repeated Contigs. RECOMB-CG: Comparative Genomics, Oct 2018, Magog-Orford, QC, Canada. pp.91-107, ⟨10.1007/978-3-030-00834-5_5⟩. ⟨lirmm-01900395v2⟩
  • Benoit Darties, Annie Chateau, Rodolphe Giroudeau, Mathias Weller. New Insights for Power Edge Set Problem. COCOA: Conference on Combinatorial Optimization and Applications, Dec 2017, Shanghai, China. pp.180-194, ⟨10.1007/978-3-319-71150-8_17⟩. ⟨lirmm-01672895⟩
  • Benoit Darties, Annie Chateau, Rodolphe Giroudeau, Mathias Weller. Improved Complexity for Power Edge Set Problem. IWOCA: International Workshop on Combinatorial Algorithms, Jul 2017, Newcastle, Australia. pp.128-141, ⟨10.1007/978-3-319-78825-8_11⟩. ⟨hal-01715909⟩
  • Mathias Weller, Annie Chateau, Rodolphe Giroudeau. On the Linearization of Scaffolds Sharing Repeated Contigs. COCOA: Conference on Combinatorial Optimization and Applications, Dec 2017, Shanghai, China. pp.509-517, ⟨10.1007/978-3-319-71147-8_38⟩. ⟨lirmm-01672893⟩
  • Eric Bourreau, Annie Chateau, Rodolphe Giroudeau, Clément Dallard. Une modélisation par Contrainte de graphe pour résoudre l’échafaudage de génome. ROADEF: Recherche Opérationnelle et Aide à la Décision, Feb 2017, Metz, France. ⟨lirmm-01875591⟩
  • Mathias Weller, Annie Chateau, Rodolphe Giroudeau, Jean-Claude König, Valentin Pollet. On Residual Approximation in Solution Extension Problems. COCOA: Conference on Combinatorial Optimization and Applications, Dec 2016, Hong Kong, China. pp.463-476, ⟨10.1007/978-3-319-48749-6_34⟩. ⟨lirmm-01378581⟩
  • Clément Dallard, Mathias Weller, Annie Chateau, Rodolphe Giroudeau. Instance Guaranteed Ratio on Greedy Heuristic for Genome Scaffolding. COCOA: Conference on Combinatorial Optimization and Applications, Dec 2016, Hong Kong, China. pp.294-308, ⟨10.1007/978-3-319-48749-6_22⟩. ⟨lirmm-01378584⟩
  • Mathias Weller, Annie Chateau, Rodolphe Giroudeau. On the Complexity of Scaffolding Problems: From Cliques to Sparse Graphs. COCOA: Conference on Combinatorial Optimization and Applications, Dec 2015, Houston, United States. pp.409-423, ⟨10.1007/978-3-319-26626-8_30⟩. ⟨lirmm-01250982⟩
  • Nicolas Briot, Annie Chateau, Remi Coletta, Simon de Givry, Philippe Leleux, et al.. An integer linear programming approach for genome scaffolding. WCB: Workshop on Constraint-Based Methods for Bioinformatics, Sep 2014, Lyon, France. ⟨hal-01198359⟩