Anne Chenuil

D. Aurelle, Séverine Thomas, Cécile H. Albert, Marc Bally, Alberte Bondeau, et al.. Biodiversity, climate change, and adaptation in the Mediterranean. Ecosphere, Ecological Society of America, 2022, 13 (4), pp.2-23. ⟨10.1002/ecs2.3915⟩. ⟨hal-03670020⟩

Jean-Pierre Féral, Marc Verlaque, Sebastián Rosenfeld, Elie Poulin, Anne Chenuil, et al.. The marine vegetation of the Kerguelen Islands: history of scientific campaigns, inventory of the flora and first analysis of its biogeographical affinities. Cryptogamie, Algologie, 2021, 42 (12), pp.173-216. ⟨hal-03331534⟩

Vincent Rossi, Madiop Lo, Térence Legrand, Enrico Ser-Giacomi, Aurélien de Jode, et al.. Small-scale connectivity of coralligenous habitats: insights from a modelling approach within a semi-opened Mediterranean bay. Vie et Milieu / Life & Environment, Observatoire Océanologique - Laboratoire Arago, In press. ⟨hal-03131637⟩

Christelle Fraïsse, Anne Haguenauer, Karin Gérard, Alexandra Anh-Thu Weber, Nicolas Bierne, et al.. Fine-grained habitat-associated genetic connectivity in an admixed population of mussels in the small isolated Kerguelen Islands. Peer Community Journal, Peer Community In/Centre Mersenne, 2021, 1, pp.e10. ⟨10.24072/pcjournal.18⟩. ⟨hal-03501373⟩

Sabine Stöhr, Alexandra Anh-Thu Weber, Emilie Boissin, Anne Chenuil. Resolving the Ophioderma longicauda (Echinodermata: Ophiuroidea) cryptic species complex: five sisters, three of them new. European Journal of Taxonomy, Consortium of European Natural History Museums, 2020, 600 (600), pp.1 - 37. ⟨10.5852/ejt.2020.600⟩. ⟨hal-02954067⟩

Sabine Stöhr, Alexandra Anh-Thu Weber, Emilie Boissin, Anne Chenuil. Resolving the Ophioderma longicauda (Echinodermata: Ophiuroidea) cryptic species complex: five sisters, three of them new – Corrigendum. European Journal of Taxonomy, Consortium of European Natural History Museums, 2020, 607, pp.1-2. ⟨10.5852/ejt.2020.607⟩. ⟨hal-03453749⟩

Melih Ertan Çinar, Jean-Pierre Féral, Christos Arvanitidis, Romain David, Ergün Taşkin, et al.. Coralligenous assemblages along their geographical distribution: Testing of concepts and implications for management. Aquatic Conservation: Marine and Freshwater Ecosystems, Wiley, 2020, 30, pp.1578 - 1594. ⟨10.1002/aqc.3365⟩. ⟨hal-02892573⟩

J.K. Pearman, G. Chust, E. Aylagas, E. Villarino, J.R. Watson, et al.. Pan‐regional marine benthic cryptobiome biodiversity patterns revealed by metabarcoding Autonomous Reef Monitoring Structures. Molecular Ecology, Wiley, 2020, 29, pp.4882-4897. ⟨10.1111/mec.15692⟩. ⟨hal-02973058⟩

Marieke E Feis, M. Anouk Goedknegt, Isabelle Arzul, Anne Chenuil, Onno Den Boon, et al.. Global invasion genetics of two parasitic copepods infecting marine bivalves. Scientific Reports, Nature Publishing Group, 2019, 9, pp.12730. ⟨10.1038/s41598-019-48928-1⟩. ⟨hal-02290155⟩

Romain David, Maria Uyarra, Susana Carvalho, Holger Anlauf, Angel Borja, et al.. Lessons from photo analyses of Autonomous Reef Monitoring Structures as tools to detect (bio-)geographical, spatial, and environmental effects. Marine Pollution Bulletin, Elsevier, 2019, 141, pp.420-429. ⟨10.1016/j.marpolbul.2019.02.066⟩. ⟨hal-02061256⟩

Alexandra Anh-Thu Weber, Sabine Stöhr, Anne Chenuil. Species delimitation in the presence of strong incomplete lineage sorting and hybridization: Lessons from Ophioderma (Ophiuroidea: Echinodermata). Molecular Phylogenetics and Evolution, Elsevier, 2019, 131, pp.138-148. ⟨10.1016/j.ympev.2018.11.014⟩. ⟨hal-02075340⟩

Aurelien de Jode, Romain David, Anne Haguenauer, Abigail Cahill, Zinovia Erga, et al.. From seascape ecology to population genomics and back. Spatial and ecological differentiation among cryptic species of the red algae Lithophyllum stictiforme/L. cabiochiae, main bioconstructors of coralligenous habitats. Molecular Phylogenetics and Evolution, Elsevier, 2019, 137, pp.104-113. ⟨10.1016/j.ympev.2019.04.005⟩. ⟨hal-02125817⟩

Laure Thierry de Ville d'Avray, Dominique Ami, A. Chenuil, Romain David, Jean-Pierre F eral. Application of the ecosystem service concept at a small-scale: The cases of coralligenous habitats in the North-western Mediterranean Sea. Marine Pollution Bulletin, Elsevier, 2019, 138, pp.160-170. ⟨10.1016/j.marpolbul.2018.10.057⟩. ⟨hal-01933094⟩

Abigail Cahill, John K Pearman, Angel Borja, Laura Carugati, Susana Carvalho, et al.. A comparative analysis of metabarcoding and morphology-based identification of benthic communities across different regional seas. Ecology and Evolution, Wiley Open Access, 2018, 8 (17), pp.8908-8920. ⟨10.1002/ece3.4283⟩. ⟨hal-01886882⟩

Anne Chenuil, Thomas Saucède, Lenaïg G. Hemery, Marc Eléaume, Jean-Pierre F eral, et al.. Understanding processes at the origin of species flocks with a focus on the marine Antarctic fauna. Biological Reviews, Wiley, 2018, 93 (1), pp.481-504. ⟨10.1111/brv.12354⟩. ⟨hal-01688786⟩

Axel G. Rossberg, Laura Uusitalo, Torsten Berg, Anastasija Zaiko, Anne Chenuil, et al.. Quantitative criteria for choosing targets and indicators for sustainable use of ecosystems. Ecological Indicators, Elsevier, 2017, 72, pp.215-224. ⟨10.1016/j.ecolind.2016.08.005⟩. ⟨hal-01631349⟩

A. A. T. Weber, L. Abi-Rached, Nicolas Galtier, A. Bernard, J. I. Montoya-Burgos, et al.. Positive selection on sperm ion channels in a brooding brittle star: consequence of life-history traits evolution. Molecular Ecology, Wiley, 2017, 26 (14), pp.3744-3759. ⟨10.1111/mec.14024⟩. ⟨hal-01573765⟩

Abigail E. Cahill, Aurelien de Jode, Sophie Dubois, Zoheir Bouzaza, D. Aurelle, et al.. A multispecies approach reveals hot spots and cold spots of diversity and connectivity in invertebrate species with contrasting dispersal modes. Molecular Ecology, Wiley, 2017, 26 (23), pp.6563-6577. ⟨10.1111/mec.14389⟩. ⟨hal-01681650⟩

Romain David, Jean-Pierre Féral, Sophie Archambeau, Fanny Arnaud, David Auber, et al.. IndexMEED cases studies using "Omics" data with graph theory. Biodiversity Information Science and Standards, Sofia : Pensoft Publishers, 2017-, 2017, TDWG 2017 - Proceedings, 1 (2), pp.340-361. ⟨10.3897/tdwgproceedings.1.20740⟩. ⟨hal-01761535⟩

Zined Marzouk, D. Aurelle, Khaled Said, Anne Chenuil. Cryptic lineages and high population genetic structure in the exploited marine snail Hexaplex trunculus (Gastropoda: Muricidae). Biological Journal of the Linnean Society, Linnean Society of London, 2017, 122 (2), pp.411-428. ⟨10.1093/biolinnean/blx070⟩. ⟨hal-01631348⟩

Emilie Egea, Bruno David, Thérèse Choné, Bernard Laurin, Jean-Pierre Féral, et al.. Morphological and genetic analyses reveal a cryptic species complex in the echinoid Echinocardium cordatum and rule out a stabilizing selection explanation.. Molecular Phylogenetics and Evolution, Elsevier, 2016, 94 (Pt A), pp.207-220. ⟨10.1016/j.ympev.2015.07.023⟩. ⟨hal-01205849⟩

Ludmila Sromek, Didier Forcioli, Rafal Lasota, Paola Furla, Katarzyna Tarnowska-Marini, et al.. Strong genetic structuring of the cockle Cerastoderma glaucum across Europe: new insights from an intronic marker and multivariate analysis. Journal of Molluscan Studies, Oxford University Press (OUP), 2016, 82 (4), pp.515--524. ⟨10.1093/mollus/eyw019⟩. ⟨hal-01444646⟩

Zined Marzouk, Anne Chenuil, Hager Blel, Khaled Saïd. Morphometric Variation of Fishery-Exploited Muricidae (Hexaplex trunculus) in the Mediterranean Sea and the Northeastern Atlantic Ocean: Implications for Stock Identification. Turkish Journal of Fisheries and Aquatic Sciences, Central Fisheries Research Institute, 2016, 16 (2), pp.327--338. ⟨10.4194/1303-2712-v16_2_13⟩. ⟨hal-01444628⟩

Bruno David, Thomas Saucède, Anne Chenuil, Emilie Steimetz, Chantal de Ridder. The taxonomic challenge posed by the Antarctic echinoids Abatus bidens and Abatus cavernosus (Schizasteridae, Echinoidea).. Polar Biology, Springer Verlag, 2016, 39 (5), pp.897-912. ⟨10.1007/s00300-015-1842-5⟩. ⟨hal-01310170⟩

Guillem Chust, Ernesto Villarino, Anne Chenuil, Xabier Irigoien, Nihayet Bizsel, et al.. Dispersal similarly shapes both population genetics and community patterns in the marine realm. Scientific Reports, Nature Publishing Group, 2016, 6, ⟨10.1038/srep28730⟩. ⟨hal-01444635⟩

Roberto Danovaro, Laura Carugati, Berzano Marco, Abigail E. Cahill, Susana de Carvalho Spinola, et al.. Implementing and Innovating Marine Monitoring Approaches for Assessing Marine Environmental Status.. Frontiers in Marine Science, Frontiers Media, 2016, 3, pp.213. ⟨10.3389/fmars.2016.00213⟩. ⟨hal-01448726⟩

K Gerard, C Roby, N Bierne, Philippe Borsa, J.-P Féral, et al.. Does natural selection explain the fine scale genetic structure at the nuclear exon Glu-5' in blue mussels from Kerguelen ?. Ecology and Evolution, Wiley Open Access, 2015, 5, pp.1456-1473. ⟨10.1002/ece3.1421⟩. ⟨ird-01366543⟩

E Boissin, E Egea, Jean-Pierre Féral, A. Chenuil. Contrasting population genetic structures in Amphipholis squamata, a complex of brooding, self-reproducing sister species sharing life history traits. Marine Ecology Progress Series, Inter Research, 2015, 539, p. 165-177. ⟨10.3354/meps11480⟩. ⟨hal-01238310⟩

Eric Pante, Nicolas Puillandre, Amélia Viricel, Sophie Arnaud-Haond, D. Aurelle, et al.. Species are hypotheses: avoid connectivity assessments based on pillars of sand. Molecular Ecology, Wiley, 2015, 24 (3), pp.525-544. ⟨hal-02002440⟩

A. A. -T. Weber, B. Merigot, S. Valiere, A. Chenuil. Influence of the larval phase on connectivity: strong differences in the genetic structure of brooders and broadcasters in the Ophioderma longicauda species complex. Molecular Ecology, Wiley, 2015, 24 (24), pp.6080--6094. ⟨10.1111/mec.13456⟩. ⟨hal-01445211⟩

Alexandra Anh-Thu Weber, Sabine Stohr, Anne Chenuil. Genetic data, reproduction season and reproductive strategy data support the existence of biological species in Ophioderma longicauda. Comptes Rendus Biologies, Elsevier, 2014, 337 (10), pp.553-560. ⟨10.1016/j.crvi.2014.07.007⟩. ⟨hal-01631350⟩

Jonathan Romiguier, P Gayral, M Ballenghien, Arnaud Bernard, V Cahais, et al.. Comparative population genomics in animals uncovers the determinants of genetic diversity. Nature, Nature Publishing Group, 2014, 515 (7526), pp.261-263. ⟨10.1038/nature13685⟩. ⟨hal-01313724⟩

Guillaume Lecointre, Nadia Améziane, Marie-Catherine Boisselier, Céline Bonillo, Frédéric Busson, et al.. Is the species flock concept operational? The Antarctic shelf case.. PLoS ONE, Public Library of Science, 2013, 8 (8), pp.e68787. ⟨10.1371/journal.pone.0068787⟩. ⟨hal-00867232⟩

K. Gerard, E. Guilloton, S. Arnaud-Haond, D. Aurelle, R. Bastrop, et al.. PCR survey of 50 introns in animals: Cross-amplification of homologous EPIC loci in eight non-bilaterian, protostome and deuterostome phyla. Marine Genomics, Elsevier, 2013, 12, pp.1-8. ⟨10.1016/j.margen.2013.10.001⟩. ⟨hal-00960755⟩

Guillaume Lecointre, Nadia Améziane, Marie-Catherine Boisselier, Céline P Bonillo, Frederic Busson, et al.. Is the Species Flock Concept Operational? The Antarctic Shelf Case. PLoS ONE, Public Library of Science, 2013, 8 (8), pp.e68787. ⟨10.1371/journal.pone.0068787⟩. ⟨mnhn-02921889⟩

Alexandra Anh-Thu Weber, Sam Dupont, Anne Chenuil. Thermotolerance and regeneration in the brittle star species complex Ophioderma longicauda: A preliminary study comparing lineages and Mediterranean basins. Comptes Rendus Biologies, Elsevier, 2013, 336 (11-12), pp.572-581. ⟨10.1016/j.crvi.2013.10.004⟩. ⟨hal-01631352⟩

Gwilherm Penant, D. Aurelle, Jean-Pierre F eral, Anne Chenuil. Planktonic larvae do not ensure gene flow in the edible sea urchin Paracentrotus lividus. Marine Ecology Progress Series, Inter Research, 2013, 480, pp.155-170. ⟨10.3354/meps10194⟩. ⟨hal-01631351⟩

Chiheb Fassatoui, Anne Chenuil, Mohamed Salah Romdhane. Relationships between heterozygosity, growth parameters and age in the common pandora Pagellus erythrinus (Sparidae) in the Gabes Gulf (Tunisia). Marine Ecology Progress Series, Inter Research, 2012, 445, pp.251-261. ⟨10.3354/meps09531⟩. ⟨hal-01631354⟩

Katarzyna Tarnowska, A. Verney, Maciej Wolowicz, Jean-Pierre Féral, Anne Chenuil. Survival of male and female Cerastoderma glaucum (Bivalvia) during aerial exposure. Vie et Milieu / Life & Environment, Observatoire Océanologique - Laboratoire Arago, 2012, 62 (1), pp.23-28. ⟨hal-00847189⟩

Katarzyna Tarnowska, Manuela Krakau, Sabine Jacobsen, Maciej Wołowicz, Jean-Pierre Féral, et al.. Comparative phylogeography of two sister (congeneric) species of cardiid bivalve: Strong influence of habitat, life history and post-glacial history. Estuarine, Coastal and Shelf Science, Elsevier, 2012, 107, pp.150-158. ⟨10.1016/j.ecss.2012.05.007⟩. ⟨hal-00847188⟩

D. Aurelle, Jean-Baptiste Ledoux, Caroline Rocher, Philippe Borsa, A. Chenuil, et al.. Phylogeography of the red coral (Corallium rubrum): inferences on the evolutionary history of a temperate gorgonian. Genetica, Springer Verlag, 2011, 139 (7), pp.855 - 869. ⟨10.1007/s10709-011-9589-6⟩. ⟨hal-01790624⟩

Agnès Dettaï, Sarah J. Adamowizc, Louise Allcock, Claudia P. Arango, David K.A. Barnes, et al.. DNA barcoding and molecular systematics of the benthic and demersal organisms of the CEAMARC survey.. Polar Science, Elsevier, 2011, 38 (8), pp.298-312. ⟨10.1016/j.polar.2011.02.002⟩. ⟨hal-00614982⟩

Emilie Egea, Bastien Merigot, Chantal Mahe-Bezac, Jean-Pierre Féral, Anne Chenuil. Differential reproductive timing in Echinocardium spp.: The first Mediterranean survey allows interoceanic and interspecific comparisons. Comptes Rendus Biologies, Elsevier, 2011, 334 (1), pp.13-23. ⟨10.1016/j.crvi.2010.10.007⟩. ⟨hal-01631355⟩

Eve Gazave, Sophie Carteron, Anne Chenuil, Evelyn Richelle-Maurer, Nicole Boury-Esnault, et al.. Polyphyly of the genus Axinella and of the family Axinellidae (Porifera: Demospongiae(p)). Molecular Phylogenetics and Evolution, Elsevier, 2010, 57 (1), pp.35-47. ⟨10.1016/j.ympev.2010.05.028⟩. ⟨hal-01631356⟩

A. Chenuil, Thierry B. Hoareau, E. Egea, G. Penant, C. Rocher, et al.. An efficient method to find potentially universal population genetic markers applied to metazoans. BMC Evolutionary Biology, BioMed Central, 2010, 10 (276), pp.1-17. ⟨10.1186/1471-2148-10-276⟩. ⟨hal-00539514⟩

Katarzyna Tarnowska, Maciej Wolowicz, Anne Chenuil, Jean-Pierre Féral. Comparative studies on the morphometry and physiology of European populations of the lagoon specialist Cerastoderma glaucum (Bivalvia). Oceanologia, Polish Academy of Sciences, 2009, 51 (3), pp.437-458. ⟨10.5697/oc.51-3.437⟩. ⟨hal-01631357⟩

Sabine Stohr, Emilie Boissin, Anne Chenuil. Potential cryptic speciation in Mediterranean populations of Ophioderma (Echinodermata: Ophiuroidea). Zootaxa, Magnolia Press, 2009, pp.1-20. ⟨hal-01631358⟩

Anne Chenuil, Emilie Egea, Caroline Rocher, Hélène Touzet, Jean-Pierre Féral. Does hybridization increase evolutionary rate? Data from the 28S-rDNA D8 domain in echinoderms.. Journal of Molecular Evolution, Springer Verlag, 2008, 67 (5), pp.539-50. ⟨10.1007/s00239-008-9171-8⟩. ⟨hal-00824034⟩

Karin Gérard, Charlotte Roby, Nicolas Chevalier, Bernard Thomassin, Anne Chenuil, et al.. Assessment of three mitochondrial loci variability for the crown-of-thorns starfish: A first insight into Acanthaster phylogeography. Comptes Rendus Biologies, Elsevier, 2008, 331 (2), pp.137-143. ⟨10.1016/j.crvi.2007.11.005⟩. ⟨hal-01631359⟩

K. Gérard, C. Roby, N. Chevalier, B. Thomassin, A. Chenuil, et al.. Assessment of three mitochondrial loci variability for the crown-of-thorns starfish: a first insight of Acanthaster phylogeography.. Comptes Rendus Biologies, Elsevier, 2008, 332, pp.137-143. ⟨hal-00260698⟩

Karin Gérard, Nicolas Bierne, Philippe Borsa, Anne Chenuil, Jean-Pierre Féral. Pleistocene separation of mitochondrial lineages of Mytilus spp. mussels from Northern and Southern Hemispheres and strong genetic differentiation among southern populations. Molecular Phylogenetics and Evolution, Elsevier, 2008, 49 (1), pp.84-91. ⟨10.1016/j.ympev.2008.07.006⟩. ⟨halsde-00475209⟩

Roxane M. Barthelemy, Anne Chenuil, Samuel Blanquart, Jean-Paul Casanova, Eric Faure. Translational machinery of the chaetognath Spadella cephaloptera: a transcriptomic approach to the analysis of cytosolic ribosomal protein genes and their expression. BMC Evolutionary Biology, BioMed Central, 2007, 7 (1), ⟨10.1186/1471-2148-7-146⟩. ⟨hal-01631361⟩

A. Chenuil. Choosing the right Molecular Genetic Markers for studying biodiversity: from molecular evolution to practical aspects (review).. Genetica, Springer Verlag, 2006, 127, pp.101-120. ⟨hal-00093762⟩

A. Chenuil, Laurent Crespin, L. Pouyaud, Patrick Berrebi. Autosomal differences between males and females in hybrid zones: a first report from Barbus barbus and Barbus meridionalis (Cyprinidae). Heredity, Nature Publishing Group, 2004, 93 (2), pp.128-134. ⟨10.1038/sj.hdy.6800455⟩. ⟨halsde-00330373⟩

A. Chenuil, Laurent Crespin, L. Pouyaud, Patrick Berrebi. Movements of adult fish in a hybrid zone revealed by microsatellite genetic analysis and capture-recapture data. Freshwater Biology, Wiley, 2000, 43 (1), pp.121-131. ⟨halsde-00332264⟩

Anne Chenuil, Abigail E. Cahill, Numa Délémontey, Elrick Du Salliant Du Luc, Hadrien Fanton. Problems and Questions Posed by Cryptic Species. A Framework to Guide Future Studies. From Assessing to Conserving Biodiversity, pp.77 - 106, 2019, ⟨10.1007/978-3-030-10991-2_4⟩. ⟨hal-03191951⟩

Romain David, Sophie Dubois, Zinovia Erga, Dorian Guillemain, Laure Thierry de Ville d'Avray, et al.. CIGESMED’s protocol and network (Coralligenous based Indicators to evaluate and monitor the “Good Environmental Status” of Mediterranean coastal waters). CNR-IBIMET Proceedings of Fifth International Symposium MONITORING OF MEDITERRANEAN COASTAL AREAS: PROBLEMS AND MEASUREMENT TECHNIQUES, pp.828-843, 2014, 978-88-95597-19-5. ⟨hal-01620518⟩