Skip to Main content
Number of documents

254

CV


Journal articles116 documents

  • David González-Diéguez, Andres Legarra, Alain Charcosset, Laurence Moreau, Christina Lehermeier, et al.. Genomic Prediction of Hybrid Crops Allows Disentangling Dominance and Epistasis. Genetics, Genetics Society of America, 2021, ⟨10.1093/genetics/iyab026⟩. ⟨hal-03154408⟩
  • Matias Bermann, Andres Legarra, Mary Kate Hollifield, Yutaka Masuda, Daniela Lourenco, et al.. Validation of single‐step GBLUP genomic predictions from threshold models using the linear regression method: An application in chicken mortality. Journal of Animal Breeding and Genetics, Wiley, 2021, 138 (1), pp.4-13. ⟨10.1111/jbg.12507⟩. ⟨hal-03154327⟩
  • Antonio Reverter, Zulma Vitezica, Marina Naval-Sánchez, John Henshall, Fernanda Raidan, et al.. Association analysis of loci implied in “buffering” epistasis. Journal of Animal Science, American Society of Animal Science, 2020, 98 (3), pp.1 - 11. ⟨10.1093/jas/skaa045⟩. ⟨hal-02887625⟩
  • Ignacy Misztal, Daniela Lourenco, Andres Legarra. Current status of genomic evaluation. Journal of Animal Science, American Society of Animal Science, 2020, 98 (4), ⟨10.1093/jas/skaa101⟩. ⟨hal-02916894⟩
  • Luis Varona, Andres Legarra. GIBBSTHUR: Software for Estimating Variance Components and Predicting Breeding Values for Ranking Traits Based on a Thurstonian Model. Animals, MDPI, 2020, 10 (6), ⟨10.3390/ani10061001⟩. ⟨hal-02923496⟩
  • Fernando Macedo, A. Reverter, Andrés Legarra. Behavior of the Linear Regression method to estimate bias and accuracies with correct and incorrect genetic evaluation models. Journal of Dairy Science, American Dairy Science Association, 2020, 103 (1), pp.529-544. ⟨10.3168/jds.2019-16603⟩. ⟨hal-02623204⟩
  • Fernando Macedo, Ole Christensen, Jean-Michel Astruc, Ignacio Aguilar, Yutaka Masuda, et al.. Bias and accuracy of dairy sheep evaluations using BLUP and SSGBLUP with metafounders and unknown parent groups. Genetics Selection Evolution, BioMed Central, 2020, 52 (1), ⟨10.1186/s12711-020-00567-1⟩. ⟨hal-02942141⟩
  • Andrés Legarra, I. Aguilar, J Jacques Colleau. Short communication: Methods to compute genomic inbreeding for ungenotyped individuals. Journal of Dairy Science, American Dairy Science Association, 2020, 103 (4), pp.1-5. ⟨10.3168/jds.2019-17750⟩. ⟨hal-02623202⟩
  • Daniela Lourenco, Andres Legarra, Shogo Tsuruta, Yutaka Masuda, Ignacio Aguilar, et al.. Single-Step Genomic Evaluations from Theory to Practice: Using SNP Chips and Sequence Data in BLUPF90. Genes, MDPI, 2020, 11 (7), pp.790. ⟨10.3390/genes11070790⟩. ⟨hal-03154325⟩
  • Ignacio Aguilar, Eduardo N. Fernandez, Agustín Blasco, Olga Ravagnolo, Andrés Legarra. Effects of ignoring inbreeding in model‐based accuracy for BLUP and SSGBLUP. Journal of Animal Breeding and Genetics, Wiley, 2020, ⟨10.1111/jbg.12470⟩. ⟨hal-02622680⟩
  • Llibertat Tusell, Hélène Gilbert, Zulma Vitezica, M. J. Mercat, Andres Legarra, et al.. Dissecting total genetic variance into additive and dominance components of purebred and crossbred pig traits. animal, Published by Elsevier (since 2021) / Cambridge University Press (until 2020), 2019, 13 (11), pp.2429-2439. ⟨10.1017/S1751731119001046⟩. ⟨hal-02619299⟩
  • Silvia Teresa Rodríguez-Ramilo, Jean Michel Elsen, Andres Legarra Albizu. Inbreeding and effective population size in French dairy sheep: Comparison between genomic and pedigree estimates. Journal of Dairy Science, American Dairy Science Association, 2019, 102 (5), pp.4227-4237. ⟨10.3168/jds.2018-15405⟩. ⟨hal-02620571⟩
  • Ignacio Aguilar, Andres Legarra, Fernando Cardoso, Yutaka Masuda, Daniela Lourenco, et al.. Frequentist p-values for large-scale-single step genome-wide association, with an application to birth weight in American Angus cattle. Genetics Selection Evolution, BioMed Central, 2019, 51 (1), ⟨10.1186/s12711-019-0469-3⟩. ⟨hal-02163078⟩
  • Andres Legarra, Antonio Reverter. Correction to: Semi-parametric estimates of population accuracy and bias of predictions of breeding values and future phenotypes using the LR method. Genetics Selection Evolution, BioMed Central, 2019, 51 (1), ⟨10.1186/s12711-019-0511-5⟩. ⟨hal-03154328⟩
  • H.L. Bradford, Y. Masuda, P.M. Vanraden, Andres Legarra, I. Misztal. Modeling missing pedigree in single-step genomic BLUP. Journal of Dairy Science, American Dairy Science Association, 2019, 102 (3), pp.2336-2346. ⟨10.3168/jds.2018-15434⟩. ⟨hal-02622431⟩
  • Yutaka Masuda, Andrés Legarra, Ignacio Aguilar, Ignacy Misztal. 331 Efficient quality control methods for genomic and pedigree data used in routine genomic evaluation. Journal of Animal Science, American Society of Animal Science, 2019, 97 (Supplement 3), pp.50-51. ⟨10.1093/jas/skz258.101⟩. ⟨hal-02913602⟩
  • B.O. Fragomeni, D.A.L. Lourenco, Andres Legarra, P.M. Vanraden, I. Misztal. Alternative SNP weighting for single-step genomic best linear unbiased predictor evaluation of stature in US Holsteins in the presence of selected sequence variants. Journal of Dairy Science, American Dairy Science Association, 2019, 102 (11), pp.10012-10019. ⟨10.3168/jds.2019-16262⟩. ⟨hal-02618977⟩
  • Tao Xiang, Ole Fredslund Christensen, Zulma Vitezica, Andres Legarra. Genomic Model with Correlation Between Additive and Dominance Effects. Genetics, Genetics Society of America, 2018, 209 (3), pp.711-723. ⟨10.1534/genetics.118.301015⟩. ⟨hal-02626209⟩
  • Luis Varona, Andrés Legarra, William Herring, Zulma G. Vitezica. Genomic selection models for directional dominance: an example for litter size in pigs. Genetics Selection Evolution, BioMed Central, 2018, 50 (1), pp.1. ⟨10.1186/s12711-018-0374-1⟩. ⟨hal-01694179⟩
  • Luis Varona, Andres Legarra, Miguel A. Toro, Zulma G. Vitezica. Non-additive effects in genomic selection. Frontiers in Genetics, Frontiers, 2018, 9, Non paginé. ⟨10.3389/fgene.2018.00078⟩. ⟨hal-02626411⟩
  • Zulma G. Vitezica, Antonio Reverter, William Herring, Andres Legarra. Dominance and epistatic genetic variances for litter size in pigs using genomic models. Genetics Selection Evolution, BioMed Central, 2018, 50 (1), pp.71. ⟨10.1186/s12711-018-0437-3⟩. ⟨hal-02405297⟩
  • Andres Legarra, Antonio Reverter. Semi-parametric estimates of population accuracy and bias of predictions of breeding values and future phenotypes using the LR method. Genetics Selection Evolution, BioMed Central, 2018, 50 (1), pp.53. ⟨10.1186/s12711-018-0426-6⟩. ⟨hal-02405272⟩
  • Andres Legarra, Anne Ricard, Luis Varona. GWAS by GBLUP : Single and Multimarker EMMAX and Bayes Factors, with an Example in Detection of a Major Gene for Horse Gait. G3, Genetics Society of America, 2018, 8 (7), pp.2301-2308. ⟨10.1534/g3.118.200336⟩. ⟨hal-02628713⟩
  • Zulma Vitezica, Andres Legarra Albizu, Miguel Angel Toro, Luis Varona. Orthogonal estimates of variances for additive, dominance and epistatic effects in Populations. Genetics, Genetics Society of America, 2017, 206 (3), pp.1297-1307. ⟨hal-01604933⟩
  • Natalia S. Forneris, Zulma G. Vitezica, Andres Legarra, Miguel Pérez-Enciso. Influence of epistasis on response to genomic selection using complete sequence data. Genetics Selection Evolution, BioMed Central, 2017, 49 (1), pp.66. ⟨10.1186/s12711-017-0340-3⟩. ⟨hal-01577472⟩
  • Carolina A. Garcia-Baccino, Andres Legarra, Ole F. Christensen, Ignacy Misztal, Ivan Pocrnic, et al.. Metafounders are related to Fst fixation indices and reduce bias in single-step genomic evaluations. Genetics Selection Evolution, BioMed Central, 2017, 49 (1), pp.34. ⟨10.1186/s12711-017-0309-2⟩. ⟨hal-01487094⟩
  • C.A. García-Baccino, S. Munilla, Andres Legarra Albizu, Zulma Vitezica, N.S. Forneris, et al.. Estimates of the actual relationship between half-sibs in a pig population. Journal of Animal Breeding and Genetics, Wiley, 2017, 134 (2), pp.109-118. ⟨10.1111/jbg.12236⟩. ⟨hal-01603844⟩
  • Breno O. Fragomeni, Daniela A. L. Lourenco, Yukata Masuda, Andres Legarra, Ignacy Misztal. Incorporation of causative quantitative trait nucleotides in single-step GBLUP. Genetics Selection Evolution, BioMed Central, 2017, 49 (1), pp.59. ⟨10.1186/s12711-017-0335-0⟩. ⟨hal-01569500⟩
  • Jean-Jacques Colleau, Isabelle Palhière, Silvia T. Rodríguez-Ramilo, Andres Legarra. A fast indirect method to compute functions of genomic relationships concerning genotyped and ungenotyped individuals, for diversity management. Genetics Selection Evolution, BioMed Central, 2017, 49 (1), pp.87. ⟨10.1186/s12711-017-0363-9⟩. ⟨hal-01653794⟩
  • Amelie Baud, Megan K. Mulligan, Francesco Paolo Casale, Jesse F. Ingels, Casey J. Bohl, et al.. Genetic Variation in the Social Environment Contributes to Health and Disease. PLoS Genetics, Public Library of Science, 2017, 13 (1), Non paginé. ⟨10.1371/journal.pgen.1006498⟩. ⟨hal-01603345⟩
  • Paulino Pérez-Rodríguez, José Crossa, Jessica Rutkoski, Jesse Poland, Ravi Singh, et al.. Single-step genomic and pedigree genotype x environment interaction models for predicting wheat lines in international environments. PLANT GENOME, 2017, 10 (2), ⟨10.3835/plantgenome2016.09.0089⟩. ⟨hal-01602637⟩
  • I Misztal, Andres Legarra Albizu. Invited review : efficient computation strategies in genomic selection. animal, Published by Elsevier (since 2021) / Cambridge University Press (until 2020), 2017, 11 (5), pp.731-736. ⟨10.1017/S1751731116002366⟩. ⟨hal-01602696⟩
  • Y. Masuda, I. Misztal, Andres Legarra Albizu, S. Tsuruta, D. A. L. Lourenco, et al.. Technical note: Avoiding the direct inversion of the numerator relationship matrix for genotyped animals in single-step genomic best linear unbiased prediction solved with the preconditioned conjugate gradient. Journal of Animal Science, American Society of Animal Science, 2017, 95 (1), pp.49-52. ⟨10.2527/jas.2016.0699⟩. ⟨hal-01603306⟩
  • Breno O. Fragomeni, Daniela A. L. Lourenco, Yutaka Masuda, Andres Legarra Albizu, Ignacy Misztal. Erratum To : Incorporation of causative quantitative trait nucleotides in single-step GBLUP. Genetics Selection Evolution, BioMed Central, 2017, 49, pp.Non Paginé. ⟨10.1186/s12711-017-0341-2⟩. ⟨hal-01608342⟩
  • E.N. Fernández, J.P. Sanchez, R. Martinez, Andres Legarra, M. Baselga. Role of inbreeding depression, non-inbred dominance deviations and random year-season effect in genetic trends for prolificacy in closed rabbit lines. Journal of Animal Breeding and Genetics, Wiley, 2017, 134 (6), pp.441-452. ⟨10.1111/jbg.12284⟩. ⟨hal-02625025⟩
  • M. Perez-Enciso, N. Forneris, G. de los Campos, Andres Legarra Albizu. Evaluating Sequence-Based Genomic Prediction with an Efficient New Simulator. Genetics, Genetics Society of America, 2017, 205 (2), pp.939-953. ⟨10.1534/genetics.116.194878⟩. ⟨hal-01606852⟩
  • T. Xiang, O.F. Christensen, Andres Legarra Albizu. Technical note : Genomic evaluation for crossbred performance in a single-step approach with metafounders.. Journal of Animal Science, American Society of Animal Science, 2017, 95 (4), pp.1472-1480. ⟨10.2527/jas.2016.1155⟩. ⟨hal-01608025⟩
  • B. D. Fragomeni, D. A. L. Lourenco, Y. Masuda, Andres Legarra, I. Misztal. Including causative variants into single step genomic BLUP. Journal of Animal Science, American Society of Animal Science, 2017, 95 (4), pp.95-96. ⟨10.2527/asasann.2017.193⟩. ⟨hal-02620359⟩
  • Eduardo N. Fernandez, Andres Legarra Albizu, Ruben Martinez, Juan Pablo Sanchez, Manuel Baselga. Pedigree-based estimation of covariance between dominance deviations and additive genetic effects in closed rabbit lines considering inbreeding and using a computationally simpler equivalent model. Journal of Animal Breeding and Genetics, Wiley, 2017, 134 (3), pp.184-195. ⟨10.1111/jbg.12267⟩. ⟨hal-01603944⟩
  • N.S. Forneris, J.P. Steibel, Andres Legarra, Zulma Vitezica, R.O. Bates, et al.. A comparison of methods to estimate genomic relationships using pedigree and markers in livestock populations. Journal of Animal Breeding and Genetics, Wiley, 2016, 133 (6), pp.452-462. ⟨10.1111/jbg.12217⟩. ⟨hal-02633716⟩
  • Tao Xiang, Ole Fredslund Christensen, Zulma Gladis Vitezica, Andres Legarra. Genomic evaluation by including dominance effects and inbreeding depression for purebred and crossbred performance with an application in pigs. Genetics Selection Evolution, BioMed Central, 2016, 48 (1), pp.92. ⟨10.1186/s12711-016-0271-4⟩. ⟨hal-01479227⟩
  • Zulma G. Vitezica, Luis Varona, Jean-Michel Elsen, Ignacy Misztal, William Herring, et al.. Genomic BLUP including additive and dominant variation in purebreds and F1 crossbreds, with an application in pigs. Genetics Selection Evolution, 2016, 48 (1), pp.6. ⟨10.1186/s12711-016-0185-1⟩. ⟨hal-01341340⟩
  • Llibertat Tusell, Hélène Gilbert, Juliette Riquet, Marie-José Mercat, Andres Legarra, et al.. Pedigree and genomic evaluation of pigs using a terminal-cross model. Genetics Selection Evolution, 2016, 48 (1), pp.32. ⟨10.1186/s12711-016-0211-3⟩. ⟨hal-01341366⟩
  • Alexandre Marchal, Andres Legarra, Sebastien Tisne, Catherine Carasco-Lacombe, Aurore Manez, et al.. Multivariate genomic model improves analysis of oil palm (Elaeis guineensis Jacq.) progeny tests. Molecular Breeding, Springer Verlag, 2016, 36 (2), Non paginé. ⟨10.1007/s11032-015-0423-1⟩. ⟨hal-02640043⟩
  • Jean-Michel Astruc, Guillaume Baloche, Diane Buisson, Julie Labatut, Gilles Lagriffoul, et al.. La sélection génomique des ovins laitiers en France. INRA Productions Animales, Paris: INRA, 2016, 29 (1), pp.41-56. ⟨hal-02634736⟩
  • Tao Xiang, B. Nielsen, G. Su, Andres Legarra, O. F. Christensen. Application of single-step genomic evaluation for crossbred performance in pig. Journal of Animal Science, American Society of Animal Science, 2016, 94 (3), pp.936-948. ⟨10.2527/jas.2015-9930⟩. ⟨hal-02640145⟩
  • Andres Legarra. Comparing estimates of genetic variance across different relationship models. Theoretical Population Biology, Elsevier, 2016, 107, pp.26-30. ⟨10.1016/j.tpb.2015.08.005⟩. ⟨hal-02637544⟩
  • Y. Masuda, I. Misztal, S. Tsuruta, Andres Legarra, I. Aguilar, et al.. Implementation of genomic recursions in single-step genomic best linear unbiased predictor for US Holsteins with a large number of genotyped animals. Journal of Dairy Science, American Dairy Science Association, 2016, 99 (3), pp.1968-1974. ⟨10.3168/jds.2015-10540⟩. ⟨hal-02635004⟩
  • Xinyue Zhang, Daniela Lourenco, Ignacio Aguilar, Andres Legarra Albizu, Ignacy Misztal. Weighting Strategies for Single-Step Genomic BLUP: An Iterative Approach for Accurate Calculation of GEBV and GWAS. Frontiers in Genetics, Frontiers, 2016, 7, pp.Non Paginé. ⟨10.3389/fgene.2016.00151⟩. ⟨hal-01602498⟩
  • Ivan Pocrnic, Daniela a L Lourenco, Yutaka Masuda, Andres Legarra, Ignacy Misztal. The dimensionality of genomic information and its effect on genomic prediction. Genetics, Genetics Society of America, 2016, 203 (1), pp.573-581. ⟨10.1534/genetics.116.187013⟩. ⟨hal-02632638⟩
  • Miguel Pérez-Enciso, Andres Legarra. A combined coalescence gene-dropping tool for evaluating genomic selection in complex scenarios (ms2gs). Journal of Animal Breeding and Genetics, Wiley, 2016, 133 (2), pp.85-91. ⟨10.1111/jbg.12200⟩. ⟨hal-02631211⟩
  • Andres Legarra, O.F. Christensen, Zulma Vitezica, Agnacio Aguilar. Ancestral relationships using metafounders : Finite ancestral population and across population relationships. Genetics, Genetics Society of America, 2015, 200 (2), pp.455-468. ⟨10.1534/genetics.115.177014⟩. ⟨hal-02639425⟩
  • N.S. Forneris, Andres Legarra, Zulma Vitezica, Shogo Tsuruta, Ignacy Misztal, et al.. Quality Control of Genotypes Using Heritability Estimates of Gene Content at the Marker. Genetics, Genetics Society of America, 2015, 199 (3), pp.675-681. ⟨10.1534/genetics.114.173559⟩. ⟨hal-02630879⟩
  • Andrés Legarra, Zulma G. Vitezica. Genetic evaluation with major genes and polygenic inheritance when some animals are not genotyped using gene content multiple-trait BLUP. Genetics Selection Evolution, 2015, 47 (1), pp.89. ⟨10.1186/s12711-015-0165-x⟩. ⟨hal-01341323⟩
  • Miguel Pérez-Enciso, Juan C Rincón, Andrés Legarra. Sequence- vs. chip-assisted genomic selection: accurate biological information is advised. Genetics Selection Evolution, 2015, 47 (1), pp.43. ⟨10.1186/s12711-015-0117-5⟩. ⟨hal-01312722⟩
  • Tao Xiang, Peipei Ma, Tage Ostersen, Andres Legarra, Ole F Christensen. Imputation of genotypes in Danish purebred and two-way crossbred pigs using low-density panels. Genetics Selection Evolution, 2015, 47 (1), pp.54. ⟨10.1186/s12711-015-0134-4⟩. ⟨hal-01339536⟩
  • Daniela A. L. Lourenco, Breno O. Fragomeni, Shogo Tsuruta, Ignacio Aguilar, Birgit Zumbach, et al.. Accuracy of estimated breeding values with genomic information on males, females, or both: an example on broiler chicken. Genetics Selection Evolution, 2015, 47 (1), pp.56. ⟨10.1186/s12711-015-0137-1⟩. ⟨hal-01340826⟩
  • Ole F. Christensen, Andres Legarra, Mogens S. Lund, Guosheng Su. Genetic evaluation for three-way crossbreeding. Genetics Selection Evolution, 2015, 47 (1), pp.98. ⟨10.1186/s12711-015-0177-6⟩. ⟨hal-01341332⟩
  • Andres Legarra Albizu, Pascal Croiseau, Marie Pierre Sanchez, Simon Teyssedre, Guillaume Salle, et al.. A comparison of methods for whole-genome QTL mapping using dense markers in four livestock species. Genetics Selection Evolution, BioMed Central, 2015, 47 (1), pp.1-10. ⟨10.1186/s12711-015-0087-7⟩. ⟨hal-01190172⟩
  • D.A.L Lourenco, Shogo Tsuruta, B.O. Fragomeni, Yutaka Masuda, Ignacio Aguilar, et al.. Genetic evaluation using single-step genomic best linear unbiased predictor in American Angus. Journal of Animal Science, American Society of Animal Science, 2015, 93 (6), pp.2653-2662. ⟨10.2527/jas.2014-8836⟩. ⟨hal-02639641⟩
  • Hans H Cheng, Sudeep Perumbakkam, Alexis Black Pyrkosz, John R Dunn, Andres Legarra, et al.. Fine mapping of QTL and genomic prediction using allele-specific expression SNPs demonstrates that the complex trait of genetic resistance to Marek's disease is predominantly determined by transcriptional regulation. BMC Genomics, BioMed Central, 2015, 16 (1), pp.1-9. ⟨10.1186/s12864-015-2016-0⟩. ⟨hal-02635208⟩
  • B.O. Fragomeni, D.A.L. Lourenco, Shogo Tsuruta, Yutaka Masuda, Ignacio Aguilar, et al.. Hot topic: Use of genomic recursions in single-step genomic best linear unbiased predictor (BLUP) with a large number of genotypes. Journal of Dairy Science, American Dairy Science Association, 2015, 98 (6), pp.4090-4094. ⟨10.3168/jds.2014-9125⟩. ⟨hal-02639642⟩
  • Huiyu Wang, Ignacy Misztal, Ignacio Aguilar, Andres Legarra, Rohan L Fernando, et al.. Genome-wide association mapping including phenotypes from relatives without genotypes in a single-step (ssGWAS) for 6-week body weight in broiler chickens. Frontiers in Genetics, Frontiers, 2014, 5, pp.Non Paginé. ⟨10.3389/fgene.2014.00134⟩. ⟨hal-02637838⟩
  • Johann Ertl, Andrés Legarra, Zulma G Vitezica, Luis Varona, Christian Edel, et al.. Genomic analysis of dominance effects on milk production and conformation traits in Fleckvieh cattle. Genetics Selection Evolution, 2014, 46 (1), pp.40. ⟨10.1186/1297-9686-46-40⟩. ⟨hal-01341269⟩
  • I. Misztal, Andres Legarra, I. Aguilar. Using recursion to compute the inverse of the genomic relationship matrix. Journal of Dairy Science, American Dairy Science Association, 2014, 97 (6), pp.3943-3952. ⟨10.3168/jds.2013-7752⟩. ⟨hal-02639561⟩
  • H. Wang, I. Misztal, Andres Legarra. Differences between genomic-based and pedigree-based relationships in a chicken population, as a function of quality control and pedigree links among individuals. Journal of Animal Breeding and Genetics, Wiley, 2014, 131 (6), pp.445-451. ⟨10.1111/jbg.12109⟩. ⟨hal-02630962⟩
  • Fabrizio Assenza, Jean-Michel Elsen, Andrés Legarra, Clément Carré, Guillaume Sallé, et al.. Genetic parameters for growth and faecal worm egg count following Haemonchus contortus experimental infestations using pedigree and molecular information. Genetics Selection Evolution, 2014, 46 (1), pp.13. ⟨10.1186/1297-9686-46-13⟩. ⟨hal-01341221⟩
  • Fabrizio Assenza, Jean-Michel Elsen, Andres Legarra, Clément Carré, Guillaume Salle, et al.. Genetic parameters for growth and faecal worm egg count following Haemonchus contortus experimental infestations using pedigree and molecular information. Genetics Selection Evolution, BioMed Central, 2014, 46 (1), pp.13. ⟨10.1186/1297-9686-46-13⟩. ⟨hal-03147147⟩
  • Andres Legarra, Guillaume Baloche, Francis Barillet, Jean-Michel Astruc, Claude Soulas, et al.. Within-and across-breed genomic predictions and genomic relationships for Western Pyrenees dairy sheep breed Latxa, Manech and Basco-Béarnaise. Journal of Dairy Science, American Dairy Science Association, 2014, 97 (5), pp.3200-3212. ⟨10.3168/jds.2013-7745⟩. ⟨hal-02630948⟩
  • Andres Legarra, O.F. Christensen, Ignacio Aguilar, Ignacy Misztal. Single Step, a general approach for genomic selection. Livestock Science, Elsevier, 2014, 166, pp.54-65. ⟨10.1016/j.livsci.2014.04.029⟩. ⟨hal-02635203⟩
  • L.A. García-Cortés, Andres Legarra, M.A. Toro. The coefficient of dominance is not (always) estimable with biallelic markers. Journal of Animal Breeding and Genetics, Wiley, 2014, 131 (2), pp.97-104. ⟨10.1111/jbg.12076⟩. ⟨hal-02634165⟩
  • Guillaume Baloche, Andres Legarra, Guillaume Sallé, Helene Larroque, Jean-Michel Astruc, et al.. Assessment of accuracy of genomic prediction for French Lacaune dairy sheep. Journal of Dairy Science, American Dairy Science Association, 2014, 97 (2), pp.1107-1116. ⟨10.3168/jds.2013-7135⟩. ⟨hal-02634041⟩
  • Zulma Vitezica, Luis Varona, Andres Legarra. On the additive and dominant variance and covariance of individuals within the genomic selection scope. Genetics, Genetics Society of America, 2013, 195 (4), pp.1223-1230. ⟨10.1534/genetics.113.155176⟩. ⟨hal-02651726⟩
  • I. Misztal, Zulma Vitezica, Andres Legarra, I. Aguilar, A.A. Swan. Unknown-parent groups in single-step genomic evaluation. Journal of Animal Breeding and Genetics, Wiley, 2013, 130 (4), pp.252-258. ⟨10.1111/jbg.12025⟩. ⟨hal-02646669⟩
  • Luis Alberto García-Cortés, Andres Legarra, Claude Chevalet. Variance and covariance of actual relationships between relatives at one locus. PLoS ONE, Public Library of Science, 2013, 8, online (2), Non paginé. ⟨10.1371/journal.pone.0057003⟩. ⟨hal-02646842⟩
  • I. Misztal, S. Tsuruta, I. Aguilar, Andres Legarra, P. M. Vanraden, et al.. Methods to approximate reliabilities in single-step genomic evaluation. Journal of Dairy Science, American Dairy Science Association, 2013, 96 (1), pp.647-654. ⟨10.3168/jds.2012-5656⟩. ⟨hal-02646704⟩
  • Carine Colombani, Andres Legarra, Sebastien Fritz, François Guillaume, Pascal Croiseau, et al.. Application of Bayesian least absolute shrinkage and selection operator (LASSO) and BayesCπ methods for genomic selection in French Holstein and Montbéliarde breeds. Journal of Dairy Science, American Dairy Science Association, 2013, 96 (1), pp.575-591. ⟨10.3168/jds.2011-5225⟩. ⟨hal-01001340⟩
  • Joaquim Casellas, Cecilia Esquivelzeta, Andres Legarra. Accounting for new mutations in genomic prediction models. Journal of Dairy Science, American Dairy Science Association, 2013, 96 (8), pp.5398-5402. ⟨10.3168/jds.2012-6468⟩. ⟨hal-02652143⟩
  • Anne Ricard, Sophie Danvy, Andres Legarra. Computation of deregressed proofs for genomic selection when own phenotypes exist with an application in French show-jumping horses. Journal of Animal Science, American Society of Animal Science, 2013, 91 (3), pp.1076-1085. ⟨10.2527/jas.2012-5256⟩. ⟨hal-01000368⟩
  • Dana Roldan, Hélène Gilbert, J.M. Henshall, Andres Legarra, Jean Michel Elsen. Fine-mapping quantitative trait loci with a medium density marker panel: efficiency of population structures and comparison of linkage disequilibrium linkage analysis models. Genetics Research, Cambridge University Press (CUP), 2012, 94 (4), pp.223-234. ⟨10.1017/S0016672312000407⟩. ⟨hal-02644125⟩
  • Sandrine Duchemin, Carine Colombani, Andres Legarra, Guillaume Baloche, Helene Larroque, et al.. Genomic selection in the French Lacaune dairy sheep breed. Journal of Dairy Science, American Dairy Science Association, 2012, 95 (5), pp.2723-2733. ⟨10.3168/jds.2011-4980⟩. ⟨hal-02644688⟩
  • Andres Legarra, Vincent Ducrocq. Computational strategies for national integration of phenotypic, genomic, and pedigree data in a single-step best linear unbiased prediction. Journal of Dairy Science, American Dairy Science Association, 2012, 95 (8), pp.4629-4645. ⟨10.3168/jds.2011-4982⟩. ⟨hal-01001202⟩
  • Llibertat Tusell, Andres Legarra, M. Garcia-Tomas, O. Rafel, J. Ramon, et al.. Genetic basis of semen traits and their relationship with growth rate in rabbits. Journal of Animal Science, American Society of Animal Science, 2012, 90 (5), pp.1385-1397. ⟨10.2527/jas.2011-4165⟩. ⟨hal-02652206⟩
  • Carine Colombani, Pascal Croiseau, S. Fritz, F. Guillaume, Andres Legarra, et al.. A comparison of partial least squares (PLS) and sparse PLS regressions in genomic selection in French dairy cattle. Journal of Dairy Science, American Dairy Science Association, 2012, 95 (4), pp.2120-2131. ⟨10.3168/jds.2011-4647⟩. ⟨hal-01000898⟩
  • H. Wang, I. Misztal, I. Aguilar, Andres Legarra, W.M. Muir. Genome-wide association mapping including phenotypes from relatives without genotypes. Genetics Research, Cambridge University Press (CUP), 2012, 94 (2), pp.73-83. ⟨10.1017/S0016672312000274⟩. ⟨hal-02652510⟩
  • Sofiene Karoui, María Jesús Carabaño, Clara Díaz, Andres Legarra. Joint genomic evaluation of French dairy cattle breeds using multiple-trait models. Genetics Selection Evolution, BioMed Central, 2012, 44, online (décembre), Non paginé. ⟨10.1186/1297-9686-44-39⟩. ⟨hal-02652575⟩
  • Guillaume Sallé, Philippe Jacquiet, L. Gruner, Jacques Cortet, Christine Sauvé, et al.. A genome scan for QTL affecting resistance to Haemonchus contortus in sheep. Journal of Animal Science, American Society of Animal Science, 2012, 90 (13), pp.4690-4705. ⟨10.2527/jas.2012-5121⟩. ⟨hal-01000688⟩
  • Florence Ytournel, Simon Teyssedre, Dana Roldan, M. Erbe, H. Simianer, et al.. LDSO : A progroam to simulate pedigrees and molecular information under various evolutionary forces. Journal of Animal Breeding and Genetics, Wiley, 2012, 129 (5), pp.417-421. ⟨10.1111/j.1439-0388.2011.00986.x⟩. ⟨hal-01000612⟩
  • Zulma Vitezica, Ignacio Aguilar, I. Misztal, Andres Legarra. Bias in genomic predictions for populations under selection. Genetics Research, Cambridge University Press (CUP), 2011, 93 (5), pp.357-366. ⟨10.1017/S001667231100022X⟩. ⟨hal-02647567⟩
  • Christel Marie-Etancelin, Benjamin Basso, S. Davail, K. Gontier, Xavier Fernandez, et al.. Genetic parameters of product's quality and hepatic metabolism in fattened mule ducks. Journal of Animal Science, American Society of Animal Science, 2011, 89 (3), pp.669-679. ⟨10.2527/jas.2010-3091⟩. ⟨hal-02652266⟩
  • Andres Legarra, Fanny Calenge, P. Mariani, Philippe Velge, Catherine Beaumont. Use of a reduced set of single nucleotide polymorphisms for genetic evaluation of resistance to Salmonella carrier state in laying hens. Poultry Science, Poultry Science Association, 2011, 90 (4), pp.731-736. ⟨10.3382/ps.2010-01260⟩. ⟨hal-02647818⟩
  • R. Simeone, I. Misztal, I. Aguilar, Andres Legarra. Evaluation of the utility of diagonal elements of the genomic relationship matrix as a diagnostic tool to detect mislabelled genotype animals in a broiler chicken population. Journal of Animal Breeding and Genetics, Wiley, 2011, 128 (5), pp.386-393. ⟨10.1111/j.1439-0388.2011.00926.x⟩. ⟨hal-02643884⟩
  • Christèle Robert-Granié, Andres Legarra, Vincent Ducrocq. Principes de base de la sélection génomique. Productions Animales, 2011, 24 (4), pp.331-340. ⟨hal-01000275⟩
  • Llibertat Tusell, Ingrid David, Loys Bodin, Andres Legarra, O. Rafel, et al.. Using the product threshold model for estimating separately the effect of temperature on male and female fertility. Journal of Animal Science, American Society of Animal Science, 2011, 89 (12), pp.3983-3995. ⟨10.2527/jas.2011-3924⟩. ⟨hal-02643845⟩
  • Ching-Yi Chen, I. Misztal, I. Aguilar, Andres Legarra, W.M. Muir. Effect of different genomic relationship matrices on accuracy and scale. Journal of Animal Science, American Society of Animal Science, 2011, 89 (9), pp.2673-2679. ⟨10.2527/jas.2010-3555⟩. ⟨hal-02644418⟩
  • I. Aguilar, I. Misztal, Andres Legarra, S. Tsuruta. Efficient computation of the genomic relationship matrix and other matrices used in single-step evaluation. Journal of Animal Breeding and Genetics, Wiley, 2011, 128 (6), pp.422-428. ⟨10.1111/j.1439-0388.2010.00912.x⟩. ⟨hal-02645733⟩
  • Luis Alberto García-Cortés, Andres Legarra. A note on the rationale for estimating genealogical coancestry from molecular markers. Genetics Selection Evolution, BioMed Central, 2011, 43, online (july), Non paginé. ⟨10.1186/1297-9686-43-27⟩. ⟨hal-02646926⟩
  • Llibertat Tusell, Andres Legarra, M. Garcia-Tomas, O. Rafel, J. Ramon, et al.. Different ways to model biological relationships between fertility and pH of the semen in rabbits. Journal of Animal Science, American Society of Animal Science, 2011, 89 (5), pp.1294-1303. ⟨10.2527/jas.2010-3242⟩. ⟨hal-02649028⟩
  • Andres Legarra, Christèle Robert-Granié, Pascal Croiseau, François Guillaume, Sébastien Fritz. Improved lasso for genomic selection. Genetics Research, Cambridge University Press (CUP), 2011, 93 (1), pp.77-87. ⟨10.1017/S0016672310000534⟩. ⟨hal-01000151⟩
  • Pascal Croiseau, Andres Legarra, François Guillaume, Sébastien Fritz, Aurélia Baur, et al.. Fine tuning genomic evaluations in dairy cattle through SNP pre-selection with the Elastic-Net algorithm. Genetics Research, Cambridge University Press (CUP), 2011, 93 (6), pp.409-417. ⟨10.1017/S0016672311000358⟩. ⟨hal-01000269⟩
  • Christine Cierco-Ayrolles, Sébastien Déjean, Andrés Legarra, Hélène Gilbert, Tom Druet, et al.. Does probabilistic modelling of linkage disequilibrium evolution improve the accuracy of QTL location in animal pedigree?. Genetics Selection Evolution, BioMed Central, 2010, 42 (october), pp.38. ⟨10.1186/1297-9686-42-38⟩. ⟨hal-00663784⟩
  • M. Ramon, Andres Legarra, E. Ugarte, J.J. Garde, M.D. Perez-Guzman. Economic weights or major milk constituents of Manchega dairy ewes. Journal of Dairy Science, American Dairy Science Association, 2010, 93 (7), pp.3303-3309. ⟨10.3168/jds.2009-2787⟩. ⟨hal-02666463⟩
  • I. Aguilar, I. Misztal, D.L. Johnson, Andres Legarra, S. Tsuruta, et al.. Hot topic : A unified approach to utilize phenotypic, full pedigree, and genomic information for genetic evaluation of Holstein final score. Journal of Dairy Science, American Dairy Science Association, 2010, 93 (2), pp.743-752. ⟨10.3168/jds.2009-2730⟩. ⟨hal-02668766⟩
  • Anne Ricard, Andres Legarra Albizu. Validation of models for analysis of ranks in horse breeding evaluation. Genetics Selection Evolution, BioMed Central, 2010, 42, online (january), Non paginé. ⟨10.1186/1297-9686-42-3⟩. ⟨hal-01193547⟩
  • Gustavo de los Campos, Hugo Naya, Daniel Gianola, José Crossa, Andrés Legarra, et al.. Predicting quantitative traits with regression models for dense molecular markers and pedigree.. Genetics, Genetics Society of America, 2009, 182 (1), pp.375-85. ⟨10.1534/genetics.109.101501⟩. ⟨pasteur-00606555⟩
  • Ingrid David, Loys Bodin, Daniel Gianola, Andres Legarra, Eduardo Manfredi, et al.. Product versus additive threshold models for analysis of reproduction outcomes in animal genetics. Journal of Animal Science, American Society of Animal Science, 2009, 87 (8), pp.2510-2518. ⟨10.2527/jas.2008-1586⟩. ⟨hal-02656727⟩
  • Andres Legarra, Rohan L. Fernando. Linear models for joint association and linkage QTL mapping. Genetics Selection Evolution, BioMed Central, 2009, 41 (september), Non paginé. ⟨10.1186/1297-9686-41-43⟩. ⟨hal-02667504⟩
  • I. Misztal, Andres Legarra, Ignacio Aguilar. Computing procedures for genetic evaluation including phenotypic, full pedigree, and genomic information. Journal of Dairy Science, American Dairy Science Association, 2009, 92 (9), pp.4648-4655. ⟨10.3168/jds.2009-2064⟩. ⟨hal-02668727⟩
  • Andres Legarra Albizu, I. Aguilar, I. Misztal. A relationship matrix including full pedigree and genomic information. Journal of Dairy Science, American Dairy Science Association, 2009, 92 (9), pp.4656-4663. ⟨10.3168/jds.2009-2061⟩. ⟨hal-02668784⟩
  • Andres Legarra, I. Misztal. Technical Note : Computing strategies in genome-wide selection. Journal of Dairy Science, American Dairy Science Association, 2008, 91 (1), pp.360-366. ⟨hal-02658143⟩
  • Andres Legarra, Christèle Robert-Granié, Eduardo Manfredi, Jean Michel Elsen. Performance of genomic selection in mice. Genetics, Genetics Society of America, 2008, 180 (1), pp.611-618. ⟨10.1534/genetics.108.088575⟩. ⟨hal-02669161⟩
  • Andres Legarra, Mathieu Ramon, E. Ugarte, M.D. Perez-Guzman, Juan José Arranz. Economic weights of somatic cell score in dairy sheep. animal, Published by Elsevier (since 2021) / Cambridge University Press (until 2020), 2007, 1 (2), pp.205-212. ⟨hal-02656142⟩
  • Andres Legarra, M Ramon, E Ugarte, Md Pérez-Guzman. Economic weights of fertility, prolificacy, milk yield and longevity in dairy sheep. animal, Published by Elsevier (since 2021) / Cambridge University Press (until 2020), 2007, 1 (2), pp.193-203. ⟨hal-02656143⟩
  • Andres Legarra, J.K. Bertrand, T. Strabel, R.L. Sapp, J.P. Sanchez, et al.. Multi-breed genetic evaluation in a Gelbvieh population. Journal of Animal Breeding and Genetics, Wiley, 2007, 124, pp.286-295. ⟨hal-02659517⟩
  • E. Lopez de Maturana, Andres Legarra, L. Varona, E. Ugarte. Analysis of fertility and dystocia in Holsteins using recursive models to handle censored and categorical data. Journal of Dairy Science, American Dairy Science Association, 2007, 90 (4), pp.2012-2024. ⟨hal-02659523⟩
  • Leopoldo Alfonso, Analia Parada, Andrés Legarra, Eva  Ugarte, Ana Arana. The effects of selective breeding against scrapie susceptibility on the genetic variability of the Latxa Black-Faced sheep breed. Genetics Selection Evolution, BioMed Central, 2006, 38 (5), pp.495-511. ⟨hal-00894546⟩

Conference papers106 documents

  • Jean-Michel Astruc, Diane Buisson, Virginie Clement, Gilles Lagriffoul, Helene Larroque, et al.. Actual and expected benefits from recent and on-going projects on the genetics of adaptation and resilience in the French dairy sheep and goats. 71st annual meeting of European Federation of Animal Science, Dec 2020, Virtual Meeting, France. ⟨hal-03155796⟩
  • Zulma Vitezica, Ignacio Aguilar, Jean-Michel Astruc, Andres Legarra. Genomic and pedigree methods to analyse inbreeding depression in Basco-Bearnaise rams. 70. Annual Meeting of the European Federation of Animal Science (EAAP), Aug 2019, Ghent, Belgium. 717 p. ⟨hal-02734412⟩
  • Silvia Teresa Rodríguez-Ramilo, A. Reverter, Andres Legarra. Selection trace from runs of homozygosity in French dairy sheep. 70. Annual Meeting of the European Federation of Animal Science (EAAP), Aug 2019, Gant, Belgium. 717 p. ⟨hal-02735177⟩
  • I. Granado-Tajada, Silvia Teresa Rodríguez-Ramilo, Andres Legarra, E. Ugarte. Inbreeding and effective population size on the latxa cara negra dairy sheep breed. XVIII. Jornadas sobre producción animal, May 2019, Zaragoza, España. ⟨hal-02785596⟩
  • I. Granado-Tajada, Silvia Teresa Rodríguez-Ramilo, Andres Legarra, E. Ugarte. Inbreeding and effective population size on Latxa dairy sheep breeed. 70. Annual Meeting of the European Federation of Animal Science (EAAP), Aug 2019, Gant, Belgium. ⟨hal-02734142⟩
  • Daniela Lourenco, Ignacio Aguilar, Andres Legarra, Stephen Miller, Shogo Tsuruta, et al.. Genomic accuracy for indirect predictions based on SNP effects from single-step GBLUP. 70. Annual meeting of the European Association for Animal Production (EAAP), Aug 2019, Ghent, Belgium. 717 p. ⟨hal-02735496⟩
  • L. Varona, Andres Legarra, W. Herring, Zulma Vitezica. Una mirada a la depresión endogámica en el tamaño de camada porcino. XIX. Reunion nacional sobre mejora genetica animal, Jun 2018, Léon, España. ⟨hal-02786956⟩
  • F.S.S. Rainan, Zulma Vitezica, Andres Legarra, L.R. Porto-Neto, Y. Li, et al.. Evaluation of dominance effects in adaptation and growth traits of tropical beef cattle. 11. World Congress on Genetics Applied to Livestock Production (WCGALP), Feb 2018, Auckland, New Zealand. ⟨hal-02787817⟩
  • Zulma Vitezica, Harmony Crichan, William Herring, A. Reverter, Andres Legarra. Epistatic genetic variances for litter size in pigs using genomic models. 11. World Congress on Genetics Applied to Livestock Production (WCGALP), Feb 2018, Auckland, New Zealand. 1130 p. ⟨hal-02735181⟩
  • A. Reverter, J. Henshall, L. R. Porto-Neto, F. Raidan, Y. Li, et al.. A rapid method for the identification of epistatic ‘dormant’ SNPs. 11. World Congress on Genetics Applied to Livestock Production (WCGALP), Feb 2018, Auckland, New Zealand. 1130 p. ⟨hal-02736609⟩
  • Andres Legarra, Zulma Vitezica, Antonio Reverter. GWAS pour épistasie contre fond génétique. Journées Scientifiques du Département Génétique Animale - La Génétique Animale et les Interactions, Oct 2018, Dienné, France. ⟨hal-02787883⟩
  • Zulma Vitezica, Luis Varona, Andres Legarra. Les effets non-additifs à l'ère de la génomique. Journées Scientifiques du Département Génétique Animale - La Génétique Animale et les Interactions, Oct 2018, Dienné, France. ⟨hal-02787052⟩
  • Silvia Teresa Rodríguez-Ramilo, Andres Legarra. Estimación de la variabilidad genetica en ovino lechero frances. XIX. Reunion nacional sobre mejora genetica animal, Jun 2018, Léon, España. ⟨hal-02785349⟩
  • Silvia Teresa Rodríguez-Ramilo, Andres Legarra. Genome-based inbreeding in French dairy sheep breeds. 69. Annual Meeting of the European Federation of Animal Science (EAAP), Aug 2018, Dubrovnik, Croatia. 705 p. ⟨hal-02734470⟩
  • Silvia Teresa Rodríguez-Ramilo, Andres Legarra. Utilisation du pedigree ou des données génomiques pour estimer la consanguinité des races ovines laitières françaises. Journées Scientifiques du Département Génétique Animale - La Génétique Animale et les Interactions, Oct 2018, Dienné, France. ⟨hal-02785650⟩
  • B. O. Fragomeni, D. A. L. Lourenco, Andres Legarra, M.E. Tooker, Paul M. Vanraden, et al.. Use of causative variants and SNP weighting in a single-step GBLUP context. 11. World Congress on Genetics Applied to Livestock Production (WCGALP), Feb 2018, Auckland, New Zealand. 1130 p. ⟨hal-02737957⟩
  • Andres Legarra. The Four Horsemen Of Genomicalypse: Fuzzy notions in genomic selection. 11. World Congress on Genetics Applied to Livestock Production (WCGALP), Feb 2018, Auckland, New Zealand. 1130 p. ⟨hal-02734920⟩
  • Daniela A. L. Lourenco, Andres Legarra, Shogo Tsuruta, D. Moser, S. Miller, et al.. Indirect predictions based on SNP effects from single- step GBLUP in large genotyped populations. ADSA Annual Meeting, Jun 2018, Knoxville, United States. ⟨hal-02735543⟩
  • Ivan Pocrnic, D.A.L. Lourenco, Yutaka Masuda, Andres Legarra, Ignacy Misztal. Limited dimensionality of genomic information and effective population size. 11. World Congress on Genetics Applied to Livestock Production (WCGALP), Feb 2018, Auckland, New Zealand. 1130 p. ⟨hal-02735484⟩
  • Diane Buisson, Gilles Lagriffoul, Andres Legarra, P. Boulenc, P. Danflous, et al.. Genomic selection in practice in French Lacaune dairy sheep. 11. World Congress on Genetics Applied to Livestock Production (WCGALP), Feb 2018, Auckland, New Zealand. 1130 p. ⟨hal-02737223⟩
  • Andres Legarra. The Four Horsemen Of Genomicalypse : Fuzzy notions in genomic selection. Breeding Data: Statistical Advances in Modern Plant Breeding, Oct 2018, Wageningen, Netherlands. ⟨hal-02785347⟩
  • Fernando Macedo, Andres Legarra. Behaviour of method LR (linear regression) to measure bias and accuracy. 69. Annual Meeting of the European Federation of Animal Science (EAAP), Aug 2018, Dubrovnick, Croatia. 705 p. ⟨hal-02734586⟩
  • Ignacio Aguilar, Shogo Tsuruta, D.A.L. Lourenco, Andres Legarra, Ignacy Misztal. BLUPF90 suite of programs for animal breeding with focus on genomics. 11. World Congress on Genetics Applied to Livestock Production (WCGALP), Feb 2018, Auckland, New Zealand. 1130 p. ⟨hal-02737030⟩
  • D.A.L. Lourenco, Shogo Tsuruta, Breno Fragomeni, Yutaka Masuda, Ignacio Aguilar, et al.. Single-step genomic BLUP for national beef cattle evaluation in US: from initial developments to final implementation. 11. World Congress on Genetics Applied to Livestock Production (WCGALP), Feb 2018, Auckland, New Zealand. 1130 p. ⟨hal-02738338⟩
  • Helene Larroque, Isabelle Palhiere, Céline Carillier-Jacquin, Marc Teissier, Andres Legarra, et al.. Les chèvres françaises à l’heure de la sélection génomique. Journées Scientifiques du Département Génétique Animale - La Génétique Animale et les Interactions, Oct 2018, Dienné, France. ⟨hal-02788943⟩
  • Llibertat Tusell Palomero, Hélène Gilbert, Zulma Vitezica, Marie-Jose Mercat-Gernigon, Andres Legarra Albizu, et al.. Estimación de la varianza aditiva y dominante en caracteres de cerdo medidos en población pura y cruzada usando G-Gibbs. XVII Jornadas sobre Producción Animal (AIDA), May 2017, Zaragoza, España. ⟨hal-01607335⟩
  • Luis Varona, Andres Legarra, William Herring, Zulma Vitezica. Modelos de evaluación genómica con dominancia direccional. XVII Jornadas sobre Producción Animal (AIDA), May 2017, Zaragoza, España. ⟨hal-02734526⟩
  • T. Xiang, O.F. Christensen, Andres Legarra. Genomic model with correlation between additive and dominant genetic effects. 68. Annual Meeting of the European Association for Animal Production (EAAP), Aug 2017, Tallinn, Estonia. 513 p. ⟨hal-02734695⟩
  • D. A. L. Lourenco, B. O. Fragomeni, Yutaka Masuda, Andres Legarra, I. Misztal. Can single-step genomic BLUP account for causative variants ?. 68. Annual Meeting of the European Association for Animal Production (EAAP), Aug 2017, Tallinn, Estonia. 513 p. ⟨hal-02736208⟩
  • Llibertat Tusell Palomero, Andres Legarra Albizu, William Herring, Zulma Vitezica. Genetic parameter estimation in purebred and crossbred pigs including dominance with kernel and two genomic models. 5. International Conference on Quantitative Genetics. Madison, Wisconsin, USA. June 12-17, 2016, Jun 2016, Madison, WI, United States. ⟨hal-01603647⟩
  • Eric Venot, Didier Boichard, Vincent Ducrocq, Pascal Croiseau, S. Fritz, et al.. French genomic experience: genomics for all ruminant species. 40. Biennal session of ICAR, Oct 2016, Puerto Varas, Chile. ⟨hal-01606324⟩
  • Eric Venot, Anne Barbat, Didier Boichard, Pascal Croiseau, Vincent Ducrocq, et al.. French genomic experience: genomics for all ruminant species. 2016 Interbull Meeting, Oct 2016, Puerto Varas, Chile. ⟨hal-02743221⟩
  • Llibertat Tusell Palomero, Hélène Gilbert, Juliette Riquet, Marie-Jose Mercat, Andres Legarra Albizu, et al.. L’évaluation génomique dans un schéma de croisement terminal. 48. Journées de la Recherche Porcine, Feb 2016, Paris, France. ⟨hal-01578256⟩
  • Ivan Pocrnic, Ignacy Misztal, D.A.L. Lourenco, Yutaka Masuda, Andres Legarra Albizu. Dimensionality of genomic information and APY inverse of the genomic relationship matrix. 67. Annual Meeting of the European Federation of Animal Science (EAAP), Aug 2016, Belfast, United Kingdom. 721 p. ⟨hal-01602866⟩
  • Andres Legarra, Zulma Vitezica. Prediction with major genes partially genotyped using gene content multiple trait BLUP. 66. Annual Meeting of the European Federation of Animal Science (EAAP), Aug 2015, Varsovie, Poland. 577 p. ⟨hal-02739229⟩
  • Yutaka Masuda, Ignacy Misztal, Shogo Tsuruta, D. A. L. Lourenco, Breno Fragomeni, et al.. Single-Step Genomic Evaluations with 570K Genotyped Animals in US Holsteins. Interbull Annual Meeting, Jul 2015, Orlando - Floride, United States. ⟨hal-02741540⟩
  • Ignacy Misztal, Breno Fragomeni, D. A. L. Lourenco, Shogo Tsuruta, Yutaka Masuda, et al.. Efficient inversion of genomic relationship matrix by the algorithm for proven and young (APY). Interbull Annual Meeting, Jul 2015, Orlando - Floride, United States. ⟨hal-02743591⟩
  • Tao Xiang, Birte Nielsen, G. Su, Andres Legarra, O.F. Christensen. Application of single-step genomic evaluation for crossbred performance in pig. 66. Annual Meeting of the European Federation of Animal Science (EAAP), Aug 2015, Varsovie, Poland. 577 p. ⟨hal-02740323⟩
  • Yutaka Masuda, Ignacy Misztal, Shogo Tsuruta, D.A.L. Lourenco, Breno Fragomeni, et al.. Genomic predictions with approximated G-inverse from large-scale genotyping data. 66. Annual Meeting of the European Federation of Animal Science (EAAP), Aug 2015, Varsovie, Poland. 577 p. ⟨hal-02741543⟩
  • D.A.L. Lourenco, Shogo Tsuruta, B.O. Fragomeni, Yutaka Masuda, Ignacio Aguilar, et al.. Large-scale single-step genomic BLUP evaluation for American Angus. 66. Annual Meeting of the European Federation of Animal Science (EAAP), Aug 2015, Varsovie, Poland. 577 p. ⟨hal-02741545⟩
  • O.F. Christensen, Andres Legarra, M.S. Lund, G. Su. Genetic evaluation for three way crossbreeding. 66. Annual Meeting of the European Federation of Animal Science (EAAP), Aug 2015, Varsovie, Poland. 577 p. ⟨hal-02740312⟩
  • Ignacy Misztal, Breno Fragomeni, D.A.L. Lourenco, Yutaka Masuda, Ignacio Aguilar, et al.. use of genomic recursions in single-step genomic BLUP with a large number of genotypes. 66. Annual Meeting of the European Federation of Animal Science (EAAP), Aug 2015, Varsovie, Poland. 577 p. ⟨hal-02741563⟩
  • Andres Legarra, O.F. Christensen, Zulma Vitezica, I. Aguilar, Ignacy Misztal. Across-breed ancestral relationships and metafounders for genomic evaluation. 10. World Congress on Genetics Applied to Livestock Production (WCGALP), Aug 2014, Vancouver, Canada. ⟨hal-02741575⟩
  • Helene Larroque, Francis Barillet, Guillaume Baloche, Jean-Michel Astruc, Diane Buisson, et al.. Toward genomic breeding programs in French dairy sheep and goats. 10. World Congress on Genetics Applied to Livestock Production (WCGALP), Aug 2014, Vancouver, Canada. ⟨hal-02742056⟩
  • Ignacy Misztal, Huiyu Wang, Ignacio Aguilar, Andres Legarra, Shogo Tsuruta, et al.. GWAS using ssGBLUP. 10. World Congress on Genetics Applied to Livestock Production (WCGALP), Aug 2014, Vancouver, Canada. ⟨hal-02743259⟩
  • Francis Barillet, Guillaume Baloche, Diane Buisson, Gilles Lagriffoul, Xavier Aguerre, et al.. Sélection génomique en ovins laitiers en France : principaux résultats et conséquences pour la mise en place de schémas de sélection génomique. 21. Rencontres autour des Recherches sur les Ruminants, Dec 2014, Paris, France. pp.411. ⟨hal-02743895⟩
  • Andres Legarra. A relationship matrix combining pedigree and markers when some individuals are not genotyped. Workshop : Statistical and computational methods for relatedness and relationship inference from genetic marker data, Sep 2014, Edinburgh, United Kingdom. ⟨hal-02793746⟩
  • Francis Barillet, Guillaume Baloche, Diane Buisson, Gilles Lagriffoul, Xavier Aguerre, et al.. Genomic selection in French dairy sheep : main results and design to implement genomic breeding schemes. 39. ICAR Biennal Session, May 2014, Berlin, Germany. ⟨hal-02798794⟩
  • Andres Legarra, Ignacy Misztal, I. Aguilar. Single step methods with a view towards poultry breeding. 10. World Congress of Genetics Applied to Livestock Production (WCGALP), Aug 2014, Vancouver, Canada. ⟨hal-02741567⟩
  • Andres Legarra. Applications of (genomic) relationships to Livestock Genetics. 27. International Biometric Conference (IBC 2014), Jul 2014, Florence, Italy. ⟨hal-02791968⟩
  • Ignacy Misztal, Zulma Vitezica, Andres Legarra, Agnacio Aguilar, Andrew A. Swan. Unknown-parent groups and incomplete pedigrees in single-step genomic evaluation. 64. Annual Meeting of the European Federation of Animal Science (EAAP), Aug 2013, Nantes, France. 665 p. ⟨hal-02748066⟩
  • Zulma Vitezica, Luis Varona, Andres Legarra. Interpretation of dominant and additive variances from genomic models. 64. Annual Meeting of the European Association for Animal Production (EAAP), Aug 2013, Nantes, France. pp.665. ⟨hal-02746587⟩
  • Johann Ertl, Andres Legarra, Zulma Vitezica, Luis Varona, Christian Edel, et al.. Genomic analysis of dominance effects in milk production and conformation traits of Fleckvieh cattle. Interbull Meeting 2013, Aug 2013, Nantes, France. ⟨hal-02746604⟩
  • Guillaume Sallé, Carole Moreno, Julien Ruesche, Mathias Aletru, Jean Louis Weisbecker, et al.. Functional investigation of a QTL affecting resistance to Haemonchus contortus in sheep. 64. Annual Meeting of the European Federation of Animal Science (EAAP), Aug 2013, Nantes, France. 665 p. ⟨hal-02746105⟩
  • Ignacio Aguilar, Andres Legarra, Shogo Tsuruta, Ignacy Misztal. Genetic evaluation using unsymmetric single step genomic methodology with large number of genotypes. Interbull Meeting 2013, Aug 2013, Nantes, France. ⟨hal-02748116⟩
  • Luis Alberto García-Cortés, Andres Legarra, Claude Chevalet. Variance and covariance of actual relationships between relatives at one locus. 64. Annual Meeting of the European Association for Animal Production (EAAP), Aug 2013, Nantes, France. 665 p. ⟨hal-02748139⟩
  • Huiyu Wang, Ignacy Misztal, Ignacio Aguilar, Andres Legarra, W. Muir. Genome-wide association mapping using single-step GBLUP. XXI. Plant & Animal Genome (PAG), Jan 2013, San Diégo, United States. ⟨hal-02808544⟩
  • Huiyu Wang, Ignacy Misztal, Ignacio Aguilar, Andres Legarra, William Muir, et al.. Genome-wide association mapping including phenotypes from relatives without genotypes for three traits in broiler chickens. ADSA ASAS Joint Annual Meeting, Jul 2013, Indianapolis, United States. ⟨hal-02808545⟩
  • Guillaume Baloche, Jean-Michel Astruc, Patrick Boulenc, Béatrice Giral-Viala, Pascal Guibert, et al.. Genomic selection experiment in Lacaune dairy sheep : Progeny test results of rams initially selected either on parent average or on genomic prediction. 10. World Congress on Genetics Applied to Livestock Production (WCGALP), Aug 2013, Vancouver, Canada. ⟨hal-02742682⟩
  • Nora Bohossian, Mohamad Saad, Andres Legarra, Maria Martinez. Exploring models for simultaneous analysis of all SNPs in genome-wide association data of human complex phenotypes. European Mathematical Genetics Meeting, Apr 2012, Göttingen, Germany. ⟨hal-02747621⟩
  • Nora Bohossian, Mohamad Saad, Andres Legarra, Maria Martinez. A multi-marker genome-wide association study: the story of Bayes C?. Annual Meeting of the International Genetic Epidemiology Society, Oct 2012, Stevenson, United States. ⟨hal-02747677⟩
  • Guillaume Baloche, Andres Legarra, Gilles Lagriffoul, Helene Larroque, Carole Moreno, et al.. Comparison of genomic evaluation in Lacaune dairy sheep using single or multiple step GBLUP. 63. Annual Meeting of the European Association of Animal Production (EAAP), Aug 2012, Bratislava, Slovakia. 476 p., ⟨10.3920/978-90-8686-761-5⟩. ⟨hal-02748963⟩
  • Sofiene Karoui, María Jesús Carabaño, Clara Díaz, Andres Legarra. Genomic evaluation combining different French dairy cattle breeds. 63. Annual Meeting of the European Association for Animal Production (EAAP), Aug 2012, Brastislava, Slovakia. 476 p. ⟨hal-02748115⟩
  • Ignacy Misztal, H. Wang, Ignacio Aguilar, Andres Legarra, B. Muir. Genome-wide association mapping using single-step GBLUP. 63. Annual Meeting of the European Association of Animal Production (EAAP), Aug 2012, Bratislava, Slovakia. 476 p., ⟨10.3920/978-90-8686-761-5⟩. ⟨hal-02748142⟩
  • Jean-Michel Astruc, Guillaume Baloche, Helene Larroque, Ignacia Beltran de Heredia, Julie Labatut, et al.. La sélection génomique des ovins laitiers en France : stratégies, premiers résultats des évaluations génomiques et perspectives. 19. Rencontres Recherche Ruminants, Dec 2012, Paris, France. pp.81-84. ⟨hal-02750263⟩
  • Francis Barillet, Guillaume Baloche, Jean-Michel Astruc, Andres Legarra. La sélection génomique : Avancées et perspectives en ovins laitiers en France. La Journée de Printemps de l'Association Française de Zootechnie (AFZ), Mar 2012, Paris, France. ⟨hal-02802206⟩
  • Francis Barillet, Guillaume Baloche, Gilles Lagriffoul, Helene Larroque, Christèle Robert-Granié, et al.. Genomic selection in French Lacaune and Manech dairy sheep breeds : comparison of BLUP and GBLUP accuracies. 38. ICAR Biennal Session, May 2012, Cork, Ireland. ⟨hal-02803975⟩
  • Ignacy Misztal, Huiyu Wang, Ignacio Aguilar, Andres Legarra, W Muir. Tools for Genomic Analyses Using Single-Step Methodology. XX. PAG Plant & Animal Genome, Jan 2012, San Diégo, United States. 1 p. ⟨hal-02808543⟩
  • Olivier Demeure, Olivier Filangi, Hélène Gilbert, Carole Moreno-Romieux, Andres Legarra Albizu, et al.. Linkage analysis of the XVIth QTLMAS simulated dataset using QTLMAP. 16th QTLMAP, AGRIS. Algero, ITA. Università degli Studi di Sassari (UniSS), ITA., May 2012, Alghero, Italy. ⟨hal-01210359⟩
  • Anne Ricard, Andres Legarra, J-Claude Meriaux, Sophie Danvy, Gerard Guérin. Premiers résultats de l'évaluation génomique chez les chevaux de concours hippique. 38. Journée de la Recherche Equine, Institut Français du Cheval et de l'Equitation (IFCE). Exmes, FRA.; Haras Nationaux. Le Pin, FRA.; Ecole Nationale d'Equitation le Cadre Noir-Saumur. Saumur, FRA., Mar 2012, Paris, France. pp.17-23. ⟨hal-01000828⟩
  • Anne Ricard, Sophie Danvy, Andres Legarra. First results on genomic selection in French show-jumping horses. 63. Annual Meeting of the European Association of Animal Production (EAAP), Aug 2012, Bratislava, Slovakia. 476 p., ⟨10.3920/978-90-8686-761-5⟩. ⟨hal-02746523⟩
  • Anne Ricard, S. Danvy, Andres Legarra. First results on genomic selection in French show jumping horses. 63. Annual Meeting of the European Federation of Animal Science, Aug 2012, Brastislava, Slovakia. pp.324. ⟨hal-02744826⟩
  • Aurélie Favier, Simon de Givry, Andres Legarra, Thomas Schiex. Décomposition par paire pour l'optimisation combinatoire dans les modèles graphiques. JFPC 2011 - Septièmes Journées Francophones de Programmation par Contraintes, Labo/service de l'auteur, Ville service, Pays service., 2011, Lyon, France. ⟨hal-02744726⟩
  • Aurélie Favier, Simon de Givry, Andres Legarra, Thomas Schiex. Pairwise decomposition for combinatorial optimization in graphical models. IJCAI 2011 - Twenty-second International Joint Conference on Artificial Intelligence, Labo/service de l'auteur, Ville service, Pays service., 2011, Barcelona, Spain. ⟨hal-02744861⟩
  • Guillaume Baloche, Helene Larroque, Jean-Michel Astruc, J.M. Babilliot, M.Y. Boscher, et al.. Work in progress on genomic evaluation using GBLUP in French Lacaune dairy sheep breed. 62. Annual Meeting of the European Federation of Animal Science (EAAP), Aug 2011, Stavanger, Norway. 529 p. ⟨hal-02746669⟩
  • Guillaume Salle, Carole Moreno, Lucas Gruner, Jacques Cortet, Christine Sauvé, et al.. Genomic mapping of resistance to Haemonchus contortus using the high-density ovineSNP50 beachchip. 23. International Conference of the World Association for the Advancement of Veterinary Parasitology, Aug 2011, Buenos Aires, Argentina. ⟨hal-02802486⟩
  • Carine Colombani, Pascal Croiseau, Chris Hoze, Sebastien Fritz, François Guillaume, et al.. Could genomic selection methods be efficient to detect QTLs? Application in French dairy cattle. QTLMAS, May 2011, Rennes, France. pp.30. ⟨hal-01190269⟩
  • Zulma Vitezica, Ignacio Aguilar, Andres Legarra. One-step vs. multi-step methods for genomic prediction in presence of selection. 9. World Congress on Genetics Applied to Livestock production, Aug 2010, Leipzig, Germany. ⟨hal-02755382⟩
  • Fanny Calenge, Andres Legarra, Catherine Beaumont. Genomic selection for resistance to Salmonella carrier-state in chicken commercial lines. International Symposium on Animal Genomics for Animal Health, May 2010, Paris, France. ⟨hal-02755038⟩
  • J.M. Astruc, Gilles Lagriffoul, Helene Larroque, Andres Legarra, Carole Moreno, et al.. Use of genomic data in French dairy sheep breeding programs : Results an Prospects. 37. ICAR Annual Meeting, May 2010, Riga, Latvia. ⟨hal-02755118⟩
  • Aurélie Favier, Jean Michel Elsen, Simon de Givry, Andres Legarra. Exact haplotype reconstruction in half-sib families with dense marker maps. 9. World Congress on Genetics Applied to Livestock Production, Aug 2010, Leipzig, Germany. ⟨hal-02755140⟩
  • I. Misztal, Ignacio Aguilar, Andres Legarra, S. Tsuruta, D.L. Johnson, et al.. A unified approach to utilize phenotypic, full pedigree, andgenomic information for genetic evaluation. 9. World Congress on Genetics Applied to Livestock Production, Aug 2010, Leipzig, Germany. ⟨hal-02755615⟩
  • I. Miszal, Ignacio Aguilar, Andres Legarra, T.J. Lawlor. Choice of parameters for single-step genomic evaluation. 61. Annual Meeting EAAP, Aug 2010, Heraklion, Greece. ⟨hal-02755620⟩
  • Ignacio Aguilar, I. Misztal, Andres Legarra, S. Tsuruta. Efficient computations of genomics relationship matrix and other matrices used in the single-step evaluation. 9. World Congress on Genetics Applied to Livestock Production, Aug 2010, Leipzig, Germany. ⟨hal-02755624⟩
  • L. Tusell, Andres Legarra, M. Garcia-Tomas, O. Rafel, J. Ramon, et al.. Different ways to model the biological relationship between fertility and the pH of semen in rabbits. 9. World Congress on Genetics Applied to Livestock Production, Aug 2010, Leipzig, Germany. ⟨hal-02755626⟩
  • I. Misztal, Ignacio Aguilar, Andres Legarra, T.J. Lawlor. Choice of parameters for single-step genomic evaluation for type. ASAS Annual Meeting, Jul 2010, Denver, Colorado, États-Unis. ⟨hal-02755631⟩
  • S. Tsuruta, Ignacio Aguilar, I. Misztal, Andres Legarra, T.J. Lawlor. Multiple trait genetic evaluation of linear type traits using genomic and phenotypic information in US Holsteins. ASAS Annual Meeting, Jul 2010, Denver, Colorado, United States. ⟨hal-02755686⟩
  • Guillaume Salle, Philippe Jacquiet, L. Gruner, Jacques Cortet, F. Prévot, et al.. QTL detection for resistance to Haemonchus contortus in sheep : A preliminary study using the ovineSNP50 beadchip. 9. World Congress on Genetics Applied to Livestock Production, Aug 2010, Leipzig, France. ⟨hal-02757602⟩
  • Carole Moreno, Jean Michel Elsen, Andres Legarra, Rachel Rupp, Jacques Bouix, et al.. Searching for genes of interest in sheep. 8. World Merino Conference, May 2010, Rambouillet, France. pp.1-7. ⟨hal-02817254⟩
  • Andres Legarra Albizu, Christèle Robert-Granie, Pascal Croiseau, F. Guillaume, S. Fritz, et al.. Aptitude of Bayesian lasso for genomic selection. 9. World Congress on Genetics Applied to Livestock Production, Aug 2010, Leipzig, Germany. ⟨hal-01193524⟩
  • Olivier Filangi, Carole Moreno-Romieux, Hélène Gilbert, Andres Legarra Albizu, Pascale Le Roy, et al.. QTLMap, a software for QTL detection in outbred populations. 9. World Congress on Genetics Applied to Livestock Production, Aug 2010, Leipzig, France. ⟨hal-01193540⟩
  • Guillaume Salle, Francois Guillaume, Andres Legarra Albizu, Carole Moreno-Romieux. Proposition of procedures to handle SNP data : Example of an ovine population genotyped with the OvineSNP50 Beadchip. International Symposium on Animal Genomics for Animal Health, May 2010, Paris, France. ⟨hal-01193620⟩
  • Andres Legarra Albizu, Christèle Robert-Granie, Pascal Croiseau, Guillaume François, Sébastien Fritz. Lasso bayesiano mejorado para seleccion genomica. XV Reunion Nacional de Mejora Genetica Animal, Jun 2010, Vigo, España. pp.1-6. ⟨hal-01193386⟩
  • Pascal Croiseau, Carine Colombani, Andres Legarra Albizu, F. Guillaume, S. Fritz, et al.. Improving genomic evaluation strategies in dairy cattle through SNP pre-selection. 9. World Congress on Genetics Applied to Livestock Production, Aug 2010, Leipzig, Germany. ⟨hal-01193548⟩
  • Carine Colombani, Andres Legarra Albizu, Pascal Croiseau, F. Guillaume, S. Fritz, et al.. Application of PLS and Sparse PLS regression in genomic selection. 9. World Congress on Genetics Applied to Livestock Production, Aug 2010, Leipzig, Germany. ⟨hal-01193580⟩
  • Carole Moreno, Guillaume Sallé, Lucas Gruner, Jacques Cortet, Christine Sauvé, et al.. QTL affecting resistance to gastro intestinal parasite infection in sheep : which applications in selection programs ?. Sustainable Animal Production in the Tropic, Nov 2010, Guadeloupe, France. ⟨hal-02754897⟩
  • Christel Marie Etancelin, Xavier Fernandez, Stéphane Davail, Jean-Marc André, Denis Bastianelli, et al.. Genetic parameters of mule ducks’ meat and fatty liver performances simultaneously estimated in both parental liness. 19. WPSA European Symposium on the Quality of Poultry Meat, Jun 2009, Turku, Finland. ⟨hal-02757336⟩
  • Fanny Calenge, P. Mariani, Philippe Velge, J. Protais, P. Kaiser, et al.. SNP-assisted for resistance to Salmonella carrier-state. Genomics for Animal Health: Outlook for the Future., 2009, Paris, France. ⟨hal-02754925⟩
  • Carole Moreno, Bertrand Servin, Thomas Faraut, Christophe Klopp, Rachel Rupp, et al.. Utilisation dune puce 60 000 SNP pour cartographier finement des QTL affectant des caractères de production, de résistance aux maladies et de comportement chez les ovins. 16. Rencontres autour des Recherches sur les Ruminants, Dec 2009, Paris, France. ⟨hal-02755058⟩
  • Jean Michel Elsen, Olivier Filangi, Hélène Gilbert, Andres Legarra, Pascale Le Roy, et al.. QTLMAP, a software for the detection of QTL in full and half sib families. 60. Annual Meeting of the European Association for Animal Production (EAAP), Aug 2009, Barcelone, Spain. ⟨hal-02755207⟩
  • Ignacy Misztal, Andres Legarra, Ignacio Aguilar. Computing procedures for genetic evaluation including phenotypic, full pedigree and genomic information.. 60. Annual Meeting of the European Association for Animal Production (EAAP), Aug 2009, Barcelona, Spain. pp.777. ⟨hal-02755662⟩
  • F. Guillaume, S. Fritz, Pascal Croiseau, Andres Legarra Albizu, Christèle Robert-Granie, et al.. Modèles d'évaluation génomique : application aux populations bovines laitières françaises. 16. Rencontres autour des Recherches sur les Ruminants, Dec 2009, Paris, France. ⟨hal-01193599⟩
  • Anne Ricard, Andrés Legarra. Ranking in competition : an efficient tool to measure aptitude ?. 60. Annual Meeting of the European Association for Animal Production(EAAP), Aug 2009, Barcelone, Spain. ⟨hal-02754821⟩
  • Herve Garreau, S.J. Eady, J. Hurtaud, Andres Legarra. Genetic parameters of production traits and resistance to digestive disorders in a commercial rabbit population. 9.World Rabbit Congress, Jun 2008, Vérone, Italy. ⟨hal-02755057⟩
  • Christel Marie Etancelin, Jean-Marc André, Elisabeth Baeza, Benjamin Basso, Denis Bastianelli, et al.. Paramètres génétiques d'indicateurs du métabolisme hépatique durant le gavage, de la qualité des produits et du taux de corticostérone chez la canard, estimés dans le cadre du programme"Genecan". 8. Journées de la Recherche sur les Palmipèdes à Foie Gras, Oct 2008, Arcachon, France. ⟨hal-02757664⟩
  • Carole Moreno, Andres Legarra, David Robelin, Christèle Robert Granié, Rachel Rupp, et al.. Présentation du projet ANR 2008 SheepSNPQTL : utilisation de la puce 60 000 SNP pour la cartographie fine de QTL chez les ovins.. Journées Scientifiques, Département de Génétique Animale, Apr 2008, Lacanau, France. ⟨hal-02813290⟩

Poster communications22 documents

  • I. Granado-Tajada, Silvia Teresa Rodríguez-Ramilo, Andres Legarra, Edgardo Ugarte. In breeding, effective population size and coancestry on Latxa dairy sheep breed. 70. Annual Meeting of the European Association for Animal Production (EAAP), Aug 2019, Ghent, Belgium. Wageningen Academic Publishers, Annual Meeting of the European Association for Animal Production, 25 (1ère Ed.), 717 p., 2019, Book of the Abstracts of the 70th Annual Meeting of the European Association for Animal Production (EAAP). ⟨hal-02734285⟩
  • Fernando Macedo, Andres Legarra. Bias, slope and accuracies of genetic evaluation of milk yield in Manech dairy sheep. 70. Annual Meeting of the European Federation of Animal Science (EAAP), Aug 2019, Ghent, Belgium. Wageningen Academic Publishers, Annual Meeting of the European Association for Animal Production, 25 (1ère Ed.), 717 p., 2019, Book of Abstracts of the 70th Annual Meeting of the European Federation of Animal Science (EAAP). ⟨hal-02736309⟩
  • J.P. Sanchez, Andres Legarra, M. Velasco-Galilea, M. Piles, O. Rafel, et al.. Genomic regions associated with individual growth and cage feed efficiency in rabbits under two feeding regimes. 37. International Society for Animal Genetics Conference (ISAG), Jul 2019, Lleida, Spain. 2019. ⟨hal-02788644⟩
  • Andres Legarra, Jean-Michel Astruc. Experiences in estimation of metafounders ancestral relationships of dairy sheep. 69. Annual Meeting of the European Federation of Animal Science (EAAP), Aug 2018, Dubrovnik, Croatia. Wageningen Academic Publishers, Annual Meeting of the European Association for Animal Production, 24 (1ère Ed.), 705 p., 2018, Book of Abstracts of the 69th Annual Meeting of the European Federation of Animal Science. ⟨hal-02734587⟩
  • J.P. Sanchez, Andres Legarra, M. Piles. Multiple trait single step Bayesian GWAS on pooled data. 11. World Congress on Genetics Applied to Livestock Production (WCGALP), Feb 2018, Auckland, New Zealand. Massey University, 1130 p., 2018, Proceeding of the 11th World Congress on Genetics Applied to Livestock Production (WCGALP). ⟨hal-02737724⟩
  • Llibertat Tusell, Hélène Gilbert, Zulma Vitezica, Marie-José Mercat, Andres Legarra, et al.. Genomics to estimate additive and dominance genetic variances in purebred and crossbred pig traits. 68. Annual Meeting of the European Association for Animal Production (EAAP), Aug 2017, Tallinn, Estonia. Wageningen Academic Publishers, Annual Meeting of the European Association for Animal Production, 23 (1ère Ed.), 513 p., 2017, Book of Abstracts of the 68th Annual Meeting of the European Federation of Animal Science. ⟨hal-02736114⟩
  • Carolina A. Garcia-Baccino, Zulma Vitezica, Andres Legarra, R.J.C. Cantet. Using metafounders reduces bias in Single Step GBLUP genomic evaluations. 5. International Conference on Quantitative Genetics, Jun 2016, Madison, Wisconsin, United States. 2016. ⟨hal-02795972⟩
  • Llibertat Tusell Palomero, Hélène Gilbert, Juliette Riquet, Marie-José Mercat, Andres Legarra Albizu, et al.. Predictive ability of a single-step terminal-cross model. 67. Annual Meeting of the European Federation of Animal Science (EAAP), Aug 2016, Belfast, United Kingdom. Wageningen Academics Publishers, Annual Meeting of the European Association for Animal Production, 22 (1ère Ed.), 721 p., 2016, Annual Meeting of the European Association for Animal Production. ⟨hal-01602463⟩
  • Eduardo Manfredi, Loys Bodin, Andres Legarra, Frédérique Pitel. Detection and estimation of epigenetic effects. 2. Réunion d'Animation épiPHASE, Mar 2016, Saint-Pée-sur-Nivelle, France. 2016. ⟨hal-02799548⟩
  • Zulma Vitezica, Jean Michel Elsen, Ignacy Misztal, Luis Varona Aguado, Andres Legarra. Genetic parameter estimation in purebred and crossbred swine from genomic models. 66. Annual Meeting of the European Federation of Animal Science (EAAP), Aug 2015, Varsovie, Poland. Wageningen Academic Publishers, Annual Meeting of the European Association for Animal Production, 21 (1ère Ed.), 577 p., 2015, Book of Abstracts of the 66th Annual Meeting of the European Federation of Animal Science. ⟨hal-02741569⟩
  • N.S. Forneris, Andres Legarra, Zulma Vitezica, Shogo Tsuruta, I. Aguilar, et al.. Quality control of genotypes using heritability estimates of gene content. 10. World Congress on Genetics Applied to Livestock Production (WCGALP), Aug 2014, Vancouver, Canada. American Society of Animal Science, 2014, 10th World Congress on Genetics Applied to Livestock Production. ⟨hal-02741572⟩
  • Luis Varona, Zulma Vitezica, S. Munilla, Andres Legarra. A general approach for calculation of genomic relationship matrices for epistatic effects. 10. World Congress on Genetics Applied to Livestock Production (WCGALP), Aug 2014, Vancouver, Canada. 2014, 10th World Congress on Genetics Applied to Livestock Production. ⟨hal-02740209⟩
  • Ignacio Aguilar, Ignacy Misztal, Shogo Tsuruta, Andres Legarra, Huiyu Wang. PREGSF90 – POSTGSF90: Computational Tools for the Implementation of Single-step Genomic Selection and Genome-wide Association with Ungenotyped Individuals in BLUPF90 Programs. 10. World Congress on Genetics Applied to Livestock Production (WCGALP), Aug 2014, Vancouver, Canada. American Society of Animal Science, 2014, Proceedings 10th Congress of Genetics Applied to Livestock Production. ⟨hal-02743809⟩
  • X Zhang, D. A. L. Lourenco, Ignacy Misztal, Ignacio Aguilar, Andres Legarra. Weighted Single-step Genomic BLUP: an Iterative Approach for Accurate Calculation of GEBV and GWAS. 10. World Congress on Genetics Applied to Livestock Production (WCGALP), Aug 2014, Vancouver, Canada. American Society of Animal Science, 2014, Proceedings 10th World Congress on Genetics Applied to Livestock Production. ⟨hal-02741542⟩
  • Fabrizio Assenza, Jean Michel Elsen, Andres Legarra, Clément Carré, Guillaume Sallé, et al.. Genetic parameters of growth and faecal egg counts obtained by using pedigree or SNP information. 64. Annual Meeting of the European Federation of Animal Science (EAAP), Aug 2013, Nantes, France. Wageningen Academic Publishers, Annual Meeting of the European Association for Animal Production, 19 (1ère Ed.), 665 p., 2013, Book of Abstracts of the 64th Annual Meeting of the European Federation of Animal Science. ⟨hal-02745089⟩
  • Ignacy Misztal, Ignacio Aguilar, Shogo Tsuruta, Andres Legarra. Adaptation of BLUPF90 package for genomic computations. 63. Annual Meeting of the European Association of Animal Production (EAAP), Aug 2012, Bratislava, Slovakia. Wageningen Academic Publishers, Annual Meeting of the European Association for Animal Production, 18 (1ère Ed.), 476 p., 2012, Book of Abstracts of the 63rd Annual Meeting of the European Federation of Animal Science. ⟨10.3920/978-90-8686-761-5⟩. ⟨hal-02750078⟩
  • Olivier Filangi, Nicola Bacciu, Olivier Demeure, Andres Legarra Albizu, Jean Michel Elsen, et al.. Finding gene to genome epistatic effects. 63. Annual Meeting of the European Federation of Animal Science (EAAP), Aug 2012, Bratislava, Slovakia. Wageningen Academic Publishers, Annual Meeting of the European Association for Animal Production, 18, 2012, Annual Meeting of the European Association for Animal Production. ⟨hal-01210736⟩
  • Anne Ricard, Sophie Danvy, Andres Legarra. First results on genomic selection in French show-jumping horses. 33. Conference of the International Society of Animal Genetics ISAG, Jul 2012, Cairns, Australia. pp.1, 2012. ⟨hal-02744401⟩
  • Zulma Vitezica, Andres Legarra. How to remove bias in genomic predictions ?. 62. Annual Meeting of the European Federation of Animal Science (EAAP), Aug 2011, Stavanger, Norway. Wageningen Academic Publishers, Abstract, p.31, 2011. ⟨hal-02745121⟩
  • Guillaume Salle, Philippe Jacquiet, L. Gruner, Jacques Cortet, Christine Sauvé, et al.. Preliminary results of a QTL detection study for resistance to Haemonchus contortus in sheep using the OvineSNP50 beadchip. International Symposium on Animal Genomics for Animal Health, May 2010, Paris, France. INRA, 2010, International Symposium on Animal Genomics for Animal Health. ⟨hal-02755043⟩
  • Carole Moreno, Jean Michel Elsen, Andres Legarra, Rachel Rupp, Jacques Bouix, et al.. Searching for genes of interest in sheep. 61. Annual Meeting of the European Association for Animal Production, Aug 2010, Heraklion, Greece. FEZ - EAAP, 16 (1ère Ed), 2010, 61th Annual Meeting of the European Association for Animal Production. ⟨hal-02755092⟩
  • Andres Legarra, Ignacio Aguilar, I. Misztal. Whole-population relationship matrix including pedigree and markers for genomic selection. 60. Annual Meeting of the European Association for Animal Production (EAAP), Aug 2009, Barcelone, Spain. Wageningen Academic Publishers, Annual Meeting of the European Association for Animal Production, 15, 2009, Book of Abstracts of the 60th Annual Meeting of the European Association for Animal Production. ⟨hal-02755627⟩

Directions of work or proceedings10 documents

  • Christèle Robert-Granié, Sandrine Duchemin, Helene Larroque, Guillaume Baloche, Francis Barillet, et al.. A comparison of various methods for the computation of genomic breeding values in French Lacaune dairy sheep breed. 62. Annual Meeting of the European Federation of Animal Science (EAAP), Aug 2011, Stavanger, Norway. Wageningen Academic Publishers, Abstract, p. 346, 2011, 978-90-8686-177-4. ⟨hal-02802283⟩
  • J. Casellas, C. Esquivelzeta, Andres Legarra. Genomic BLUP with additive mutational effects. 62. Annual Meeting of the European Federation of Animal Science (EAAP), Aug 2011, Stavanger, Norway. Wageningen Academic Publishers, Abstract, p.8, 2011, 978-90-8686-177-4. ⟨hal-02806705⟩
  • M.A. Toro, L.A. García-Cortés, Andres Legarra. Rationale for estimating genealogical coancestry from molecular markers. 62. Annual Meeting of the European Federation of Animal Science (EAAP), Aug 2011, Stavanger, Norway. Wageningen Academic Publishers, Abstract, p. 175, 2011, 978-90-8686-177-4. ⟨hal-02808500⟩
  • Andres Legarra, I. Misztal, Ignacio Aguilar. The single step : genomic evaluation for all. 62. Annual Meeting of the European Federation of Animal Science (EAAP), Aug 2011, Stavanger, Norway. Wageningen Academic Publishers, Abstract, p.1, 2011, 978-90-8686-177-4. ⟨hal-02808527⟩
  • I. Misztal, S. Tsuruta, Ignacio Aguilar, Andres Legarra, T.J. Lawlor. Approximation of genomic accuracies in single-step genomic evaluation. Interbull Meeting, Aug 2011, Stavanger, Norway. Interbull Centre, pp.1-6, 2011. ⟨hal-02808528⟩
  • I. Beltran de Heredia, E. Ugarte, X. Aguerre, Claude Soulas, F. Arrese, et al.. Genomia : Across-Pyrenees genomic selection for dairy sheep. 62. Annual Meeting of the European Federation of Animal Science (EAAP), Aug 2011, Stavanger, Norway. Wageningen Academic Publishers, Abstract, p. 181, 2011, 978-90-8686-177-4. ⟨hal-02810281⟩
  • Carine Colombani, Andres Legarra Albizu, Pascal Croiseau, S. Fritz, F. Guillaume, et al.. Bayes Cpi versus GBLUP, OLS regression, sparse PLS and elestic net methods for genomic selection in french dairy cattle. 62. Annual Meeting of the European Federation of Animal Science (EAAP), Aug 2011, Stavanger, Norway. Wageningen Academic, Abstract, p.7, 2011, 978-90-8686-177-4. ⟨hal-01193657⟩
  • Vincent Ducrocq, Andres Legarra Albizu. An iterative implementation of the single step approach for genomic evaluation which preserves existing genetic evaluation models and software. Interbull Meeting, Aug 2011, Stavanger, Norway. 5 p., 2011. ⟨hal-01193668⟩
  • Pascal Croiseau, Chris Hoze, S. Fritz, F. Guillaume, Carine Colombani, et al.. Description of the French genomic evaluation approach. 62. Annual Meeting of the European Federation of Animal Science (EAAP), Aug 2011, Stavanger, Norway. Wageningen Academic, Abstract, p.3, 2011, 978-90-8686-177-4. ⟨hal-01193637⟩
  • Andres Legarra, Jean Michel Elsen, Eduardo Manfredi, Christèle Robert-Granié. Validation of genomic selection in an outbred mice population. 58. Annual Meeting of the European Association for Animal Production, Aug 2007, Dublin, Ireland. Wageningen Academic Publishers, Abstract p. 162, 2007, 978-90-8686-045-6. ⟨hal-02820502⟩