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Restricted mobility of side chains on concave surfaces of solenoid proteins may impart heightened potential for intermolecular interactions: Binding of Ligands to Solenoid Proteins

L. Ramya , N. Gautham , Laurent Chaloin , Andrey V. Kajava
Proteins - Structure, Function and Bioinformatics, 2015, 83 (9), pp.1654--1664. ⟨10.1002/prot.24851⟩
Article dans une revue istex hal-01883485v1

Tally: a scoring tool for boundary determination between repetitive and non-repetitive protein sequences

François D. Richard , Ronnie Alves , Andrey V. Kajava
Bioinformatics, 2016, 32 (13), pp.1952--1958. ⟨10.1093/bioinformatics/btw118⟩
Article dans une revue hal-01878040v1

Classification of β-hairpin repeat proteins

Daniel Barry Roche , Phuong Do Viet , Anastasia Bakulina , Layla Hirsh , Silvio C.E. Tosatto , et al.
Journal of Structural Biology, 2018, 201 (2), pp.130--138. ⟨10.1016/j.jsb.2017.10.001⟩
Article dans une revue hal-01875236v1
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Seroreactivity of the Severe Acute Respiratory Syndrome Coronavirus 2 Recombinant S Protein, Receptor-Binding Domain, and Its Receptor-Binding Motif in COVID-19 Patients and Their Cross-Reactivity With Pre-COVID-19 Samples From Malaria-Endemic Areas

Abdouramane Traoré , Merepen Guindo , Drissa Konaté , Bourama Traoré , Seidina Diakité , et al.
Frontiers in Immunology, 2022, 13, pp.856033. ⟨10.3389/fimmu.2022.856033⟩
Article dans une revue hal-03827325v1
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Census of exposed aggregation-prone regions in proteomes

Théo Falgarone , Étienne Villain , Francois Richard , Zarifa Osmanli , Andrey V Kajava
Briefings in Bioinformatics, 2023, 24 (4), ⟨10.1093/bib/bbad183⟩
Article dans une revue hal-04294452v1
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Origin and Evolution of GALA-LRR, a New Member of the CC-LRR Subfamily: From Plants to Bacteria?

Andrey Kajava , Maria Anisimova , Nemo Peeters
PLoS ONE, 2008, 3 (2), pp.e1694. ⟨10.1371/journal.pone.0001694⟩
Article dans une revue hal-02659191v1
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Molecular determinants of fibrillation in a viral amyloidogenic domain from combined biochemical and biophysical studies

Juliet F Nilsson , Hakima Baroudi , Frank Gondelaud , Giulia Pesce , Christophe Bignon , et al.
2022
Pré-publication, Document de travail hal-04245075v1

Structure-based view on [ \textitPSI ^\textrm+ ] prion properties

Stanislav A Bondarev , Galina A Zhouravleva , Mikhail V Belousov , Andrey V Kajava
Prion, 2015, 9 (3), pp.190--199. ⟨10.1080/19336896.2015.1044186⟩
Article dans une revue hal-01883477v1
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Drosophila Spag is the homolog of RNA polymerase II-associated protein 3 (RPAP3) and recruits the heat shock proteins 70 and 90 (Hsp70 and Hsp90) during the assembly of cellular machineries

H. Benbahouche Nel , I. Iliopoulos , I. Torok , J. Marhold , J. Henri , et al.
Journal of Biological Chemistry, 2014, 289 (9), pp.6236--47. ⟨10.1074/jbc.M113.499608⟩
Article dans une revue hal-02191553v1

PRDB: Protein Repeat DataBase.

Julien Jorda , Thierry Baudrand , Andrey V Kajava
Proteomics, 2012, 12 (9), pp.1333-6. ⟨10.1002/pmic.201100534⟩
Article dans une revue istex hal-00715261v1
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Why does the first protein repeat often become the only one?

Simona Manasra , Andrey V Kajava
Journal of Structural Biology, 2023, 215 (3), pp.108014. ⟨10.1016/j.jsb.2023.108014⟩
Article dans une revue hal-04294422v1
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Point mutations affecting yeast prion propagation change the structure of its amyloid fibrils

Anna Sulatskaya , Stanislav Bondarev , Maksim Sulatsky , Nina Trubitsina , Mikhail Belousov , et al.
Journal of Molecular Liquids, 2020, 314, pp.113618. ⟨10.1016/j.molliq.2020.113618⟩
Article dans une revue hal-03089300v1

Malaria vaccine: why is it taking so long?

Giampietro Corradin , Andrey V Kajava
Expert Review of Vaccines, 2010, 9 (2), pp.111-4. ⟨10.1586/erv.09.154⟩
Article dans une revue hal-00509889v1

Designs on a curve

J Fernando Bazan , Andrey V Kajava
Nature Structural and Molecular Biology, 2015, 22 (2), pp.103--105. ⟨10.1038/nsmb.2966⟩
Article dans une revue hal-01883476v1
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Protein Co-Aggregation Related to Amyloids: Methods of Investigation, Diversity, and Classification

Stanislav Bondarev , Kirill Antonets , Andrey Kajava , Anton Nizhnikov , Galina Zhouravleva
International Journal of Molecular Sciences, 2018, 19 (8), pp.2292. ⟨10.3390/ijms19082292⟩
Article dans une revue hal-01971839v1
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Modeling polymorphic ventricular tachycardia at rest using patient-specific induced pluripotent stem cell-derived cardiomyocytes

Yvonne Sleiman , Monia Souidi , Ritu Kumar , Ellen Yang , Fabrice Jaffré , et al.
EBioMedicine, 2020, 60, pp.103024. ⟨10.1016/j.ebiom.2020.103024⟩
Article dans une revue hal-03089303v2

Porins and Amyloids are Coded by Similar Sequence Motifs

Etienne Villain , Aleksei Nikekhin , Andrey Kajava
Proteomics, 2018, 19 (6), pp.1800075. ⟨10.1002/pmic.201800075⟩
Article dans une revue hal-02414022v1
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Post-Translational Modifications and Diastolic Calcium Leak Associated to the Novel RyR2-D3638A Mutation Lead to CPVT in Patient-Specific hiPSC-Derived Cardiomyocytes

Ivana Acimovic , Marwan Refaat , Adrien Moreau , Anton Salykin , Steve Reiken , et al.
Journal of Clinical Medicine Research, 2018, 7 (11), pp.423. ⟨10.3390/jcm7110423⟩
Article dans une revue hal-01918447v1

Protein homorepeats sequences, structures, evolution, and functions.

Julien Jorda , Andrey V Kajava
Advances in Protein Chemistry and Structural Biology, 2010, 79, pp.59-88. ⟨10.1016/S1876-1623(10)79002-7⟩
Article dans une revue hal-00533762v1
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Pathogenic TRIO variants associated with neurodevelopmental disorders perturb the molecular regulation of TRIO and axon pathfinding in vivo

Maxime Bonnet , Fiona Roche , Christine Fagotto-Kaufmann , Gabriella Gazdagh , Iona Truong , et al.
Molecular Psychiatry, 2023, 28 (4), pp.1527-1544. ⟨10.1038/s41380-023-01963-x⟩
Article dans une revue hal-04121466v1
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Tandem repeats lead to sequence assembly errors and impose multi-level challenges for genome and protein databases

Ole Tørresen , Bastiaan Star , Pablo Mier , Miguel Andrade-Navarro , Alex Bateman , et al.
Nucleic Acids Research, 2019, 47 (21), pp.10994-11006. ⟨10.1093/nar/gkz841⟩
Article dans une revue hal-03089273v1
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Trimeric SARS-CoV-2 Spike Proteins Produced from CHO Cells in Bioreactors Are High-Quality Antigens

Paco Pino , Joeri Kint , Divor Kiseljak , Valentina Agnolon , Giampietro Corradin , et al.
Processes, 2020, 8 (12), pp.1539. ⟨10.3390/pr8121539⟩
Article dans une revue hal-03089309v1

In search of the boundary between repetitive and non-repetitive protein sequences

F. D. Richard , Andrey Kajava
Biochemical Society Transactions, 2015, 43 (5), pp.807--811. ⟨10.1042/BST20150073⟩
Article dans une revue hal-01883484v1
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Protein tandem repeats - the more perfect, the less structured.

Julien Jorda , Bin Xue , Vladimir N Uversky , Andrey V Kajava
FEBS Journal, 2010, epub ahead of print. ⟨10.1111/j.1742-4658.2010.07684.x⟩
Article dans une revue hal-00491996v1

Aspartate-phobia of thermophiles as a reaction to deleterious chemical transformations

Etienne Villain , Philippe Fort , Andrey V. Kajava
2020
Pré-publication, Document de travail hal-02998694v1

Single substitution in bacteriophage T4 RNase H alters the ratio between its exo- and endonuclease activities

Natalia Kholod , Dmitry Sivogrivov , Oleg Latypov , Sergey Mayorov , Rafail Kuznitsyn , et al.
Mutation Research - Fundamental and Molecular Mechanisms of Mutagenesis, 2015, 781, pp.49--57. ⟨10.1016/j.mrfmmm.2015.09.004⟩
Article dans une revue hal-01883497v1

Beta arcades: recurring motifs in naturally occurring and disease-related amyloid fibrils.

Andrey V Kajava , Ulrich Baxa , Alasdair C Steven
FASEB Journal, 2010, 24 (5), pp.1311-9. ⟨10.1096/fj.09-145979⟩
Article dans une revue hal-00443820v1
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The HslV Protease from Leishmania major and Its Activation by C-terminal HslU Peptides

Ndeye Kebe , Krishnananda Samanta , Priyanka Singh , Josephine Lai-Kee-Him , Viviana Apicella , et al.
International Journal of Molecular Sciences, 2019, 20 (5), pp.1021. ⟨10.3390/ijms20051021⟩
Article dans une revue hal-02339525v1

Aspartate‐phobia of thermophiles as a reaction to deleterious chemical transformations

Etienne Villain , Philippe Fort , Andrey Kajava
BioEssays, 2022, 44 (1), pp.2100213. ⟨10.1002/bies.202100213⟩
Article dans une revue hal-03717776v1
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DisProt: intrinsic protein disorder annotation in 2020

András Hatos , Borbála Hajdu-Soltész , Alexander Monzon , Nicolas Palopoli , Lucía Álvarez , et al.
Nucleic Acids Research, 2019, ⟨10.1093/nar/gkz975⟩
Article dans une revue hal-02414183v1