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Publications Anastasia Bestin


Chef de projets en sélection aquacole au SYSAAF


Journal articles18 documents

  • Ronan Griot, François Allal, Florence Phocas, Sophie Brard-Fudulea, Romain Morvezen, et al.. Genome-wide association studies for resistance to viral nervous necrosis in three populations of European sea bass (Dicentrarchus labrax) using a novel 57k SNP array DlabChip. Aquaculture, Elsevier, 2021, 530, pp.735930. ⟨10.1016/j.aquaculture.2020.735930⟩. ⟨hal-03150867⟩
  • Marc Vandeputte, Anastasia Bestin, Louarn Fauchet, Jean-Michel Allamellou, Stéphane Bosc, et al.. Can we identify wild-born salmon from parentage assignment data? A case study in the Garonne-Dordogne rivers salmon restoration programme in France. Aquatic Living Resources, EDP Sciences, 2021, 34, pp.1-10. ⟨10.1051/alr/2021008⟩. ⟨hal-03188874⟩
  • Anastasia Bestin, Olivier Brunel, Arnaud Malledant, Bastien Debeuf, Philippe Benoit, et al.. Genetic parameters of caviar yield, color, size and firmness using parentage assignment in an octoploid fish species, the Siberian sturgeon Acipenser baerii. Aquaculture, Elsevier, 2021, 540, pp.1-7. ⟨10.1016/j.aquaculture.2021.736725⟩. ⟨hal-03198203⟩
  • Clémence Fraslin, Florence Phocas, Anastasia Bestin, Mathieu Charles, Maria Bernard, et al.. Genetic determinism of spontaneous masculinisation in XX female rainbow trout: new insights using medium throughput genotyping and whole-genome sequencing. Scientific Reports, Nature Publishing Group, 2020, 10, pp.1-13. ⟨10.1038/s41598-020-74757-8⟩. ⟨hal-02988446⟩
  • Romain Feron, Margot Zahm, Cédric Cabau, Christophe Klopp, Céline Roques, et al.. Characterization of a Y‐specific duplication/insertion of the anti‐Mullerian hormone type II receptor gene based on a chromosome‐scale genome assembly of yellow perch, Perca flavescens. Molecular Ecology Resources, Wiley/Blackwell, 2020, 20 (2), pp.531-543. ⟨10.1111/1755-0998.13133⟩. ⟨hal-02623895⟩
  • Martin Prchal, Martin Kocour, Marc Vandeputte, Antti Kause, Alain Vergnet, et al.. Morphological predictors of slaughter yields using 3D digitizer and their use in a common carp breeding program. Aquaculture, Elsevier, 2020, 520, pp.1-9. ⟨10.1016/j.aquaculture.2020.734993⟩. ⟨hal-02627292⟩
  • Jinfeng Zhao, Martin Prchal, Christos Palaiokostas, Ross D. Houston, Antti Kause, et al.. Genetic relationship between koi herpesvirus disease resistance and production traits inferred from sibling performance in Amur mirror carp. Aquaculture, Elsevier, 2020, 520, pp.1-6. ⟨10.1016/j.aquaculture.2020.734986⟩. ⟨hal-02627286⟩
  • Marc Vandeputte, Clémence Fraslin, Pierrick Haffray, Anastasia Bestin, François Allal, et al.. How to genetically increase fillet yield in fish: Relevant genetic parameters and methods to predict genetic gain. Aquaculture, Elsevier, 2020, 519, pp.734877. ⟨10.1016/j.aquaculture.2019.734877⟩. ⟨hal-03150887⟩
  • J. D’ambrosio, Romain Morvezen, S. Brard-Fudulea, Anastasia Bestin, A. Acin Perez, et al.. Genetic architecture and genomic selection of female reproduction traits in rainbow trout. BMC Genomics, 2020, 21 (1), pp.1-14. ⟨10.1186/s12864-020-06955-7⟩. ⟨hal-02938176⟩
  • Jonathan D’ambrosio, Florence Phocas, Pierrick Haffray, Anastasia Bestin, Sophie Brard-Fudulea, et al.. Genome-wide estimates of genetic diversity, inbreeding and effective size of experimental and commercial rainbow trout lines undergoing selective breeding. Genetics Selection Evolution, BioMed Central, 2019, 51 (1), pp.26. ⟨10.1186/s12711-019-0468-4⟩. ⟨hal-02151750⟩
  • Marc Vandeputte, Jérôme Bugeon, Anastasia Bestin, Alexandre Desgranges, Jean-Michel Allamellou, et al.. First evidence of realized selection response on fillet yield in Rainbow trout Oncorhynchus mykiss, Using Sib selection or based on correlated ultrasound measurements. Frontiers in Genetics, Frontiers, 2019, 10, pp.1-13. ⟨10.3389/fgene.2019.01225⟩. ⟨hal-02627462⟩
  • Clémence Fraslin, S. Brard‐fudulea, Jonathan d'Ambrosio, Anastasia Bestin, Mathieu Charles, et al.. Rainbow trout resistance to bacterial cold water disease: two new quantitative trait loci identified after a natural disease outbreak on a French farm. Animal Genetics, Wiley-Blackwell, 2019, 50 (3), pp.293-297. ⟨10.1111/age.12777⟩. ⟨hal-02166481⟩
  • Martin Prchal, Antti Kause, Marc Vandeputte, David Gela, Jean-Michel Allamellou, et al.. The genetics of overwintering performance in two-year old common carp and its relation to performance until market size. PLoS ONE, Public Library of Science, 2018, 13 (5), pp.1-1. ⟨10.1371/journal.pone.0191624⟩. ⟨hal-01810425⟩
  • Clémence Fraslin, Mathilde Dupont-Nivet, Pierrick Haffray, Anastasia Bestin, Marc Vandeputte. How to genetically increase fillet yield in fish: New insights from simulations based on field data. Aquaculture, Elsevier, 2018, 486, pp.175-183. ⟨10.1016/j.aquaculture.2017.12.012⟩. ⟨hal-01674984⟩
  • Christos Palaiokostas, Sophie Cariou, Anastasia Bestin, Jean-Sebastien Bruant, Pierrick Haffray, et al.. Genome-wide association and genomic prediction of resistance to viral nervous necrosis in European sea bass (Dicentrarchus labrax) using RAD sequencing. Genetics Selection Evolution, BioMed Central, 2018, 50 (1), pp.1-11. ⟨10.1186/s12711-018-0401-2⟩. ⟨hal-01826622⟩
  • Martin Prchal, Jérôme Bugeon, Marc Vandeputte, Antti Kause, Alain Vergnet, et al.. Potential for genetic improvement of the main slaughter yields in Common Carp with in vivo morphological predictors. Frontiers in Genetics, Frontiers, 2018, 9, pp.1-13. ⟨10.3389/fgene.2018.00283⟩. ⟨hal-02625209⟩
  • Marc Vandeputte, Antonio Puledda, Anne Sophie Tyran, Anastasia Bestin, Céline Coulombet, et al.. Investigation of morphological predictors of fillet and carcass yield in European sea bass (Dicentrarchus labrax) for application in selective breeding. Aquaculture, Elsevier, 2017, 470, pp.40-49. ⟨10.1016/j.aquaculture.2016.12.014⟩. ⟨hal-01595276⟩
  • Thomas Broquet, Audrey Barranger, Emmanuelle Billard, Anastasia Bestin, Rémy Berger, et al.. The Size Advantage Model of Sex Allocation in the Protandrous Sex-Changer Crepidula fornicata: Role of the Mating System, Sperm Storage, and Male Mobility. The American Naturalist, The American Society of Naturalists, 2015, 186 (3), pp.404-420. ⟨10.1086/682361⟩. ⟨hal-01196801⟩

Conference papers32 documents

  • Yoannah François, Marie Villa, Bruno Peyrou, Pierrick Haffray, Thierry Morin, et al.. Toward a selection to improve turbot (Scophthalmus maximus) resistance to Edwardsiellosis. European Aquaculture 2020, Apr 2021, Cork, Ireland. ⟨hal-03198176⟩
  • Ronan Griot, François Allal, F. Phocas, Sophie Brard-Fudulea, Romain Morvezen, et al.. Genome wide association studies revealed one strong effect QTLfor viral nervous necrosis resistance in European sea bass (Dicentrarchus labrax). Aquaculture Europe 2020, Apr 2021, Cork, Ireland. ⟨hal-03198222⟩
  • Anastasia Bestin, Sophie Cariou, Jean-Sébastien Bruant, Marc Vandeputte, Florian Enez, et al.. Combining data from successive cohorts to increase the accuracy of estimated breeding values: a case study in a gilthead sea bream (Sparus aurata) commercial line. Aquaculture Europe 2020 online, Apr 2021, Cork, Ireland. ⟨hal-03187498⟩
  • Jinfeng Zhao, Martin Prchal, Christos Palaiokostas, Ross D. Houston, Antti Kause, et al.. The relationship between koi herpesvirus disease resistance and other production traits inferred from sibling performance in amur mirror carp. Aquaculture Europe 2019, European Aquaculture Society (EAS). BEL., Oct 2019, Berlin, Germany. ⟨hal-02317166⟩
  • Martin Prchal, Jérôme Bugeon, Marc Vandeputte, A. Kause, Alain Vergnet, et al.. Morphological predictors of slaughter yields using 3D digitizer and their utilization in common carp breeding program. Aquaculture Europe 2019, European Aquaculture Society (EAS). BEL., Oct 2019, Berlin, Germany. ⟨hal-02317178⟩
  • Marc Vandeputte, Jérôme Bugeon, Anastasia Bestin, Alexandre Desgranges, Jean-Michel Allamelou, et al.. Réponse à la sélection sur le rendement de filet chez la truite arc-en-ciel. 6. Journées de la Recherche Filière Piscicole, Institut Technique de l'Aviculture et des Elevages de Petits Animaux (ITAVI). FRA., Jul 2019, Paris, France. ⟨hal-02734410⟩
  • Marc Vandeputte, Jérôme Bugeon, Anastasia Bestin, Alexandre Desgranges, Sébastien Courant, et al.. Successful realized selection response for fillet yield in rainbow trout Oncorhynchus mykiss. World Aquaculture 2018, European Aquaculture Society (EAS)., Aug 2019, Montpellier, France. ⟨hal-02264916⟩
  • Clémence Fraslin, Anastasia Bestin, Nicolas Dechamp, Jonathan d'Ambrosio, Francine Krieg, et al.. GWAS reveals several genomic regions governing spontaneous XX-maleness in rainbow trout. Aquaculture Europe 2019, European Aquaculture Society (EAS). BEL., Oct 2019, Berlin, Germany. ⟨hal-02317177⟩
  • Jonathan d'Ambrosio, Romain Morvezen, S. Brard-Fudulea, Anastasia Bestin, Pierrick Haffray, et al.. Development of genomic predictions for female reproduction traits in rainbow trout (Oncorhynchus mykiss). Gordon Research conference - Quantitative genetics and genomics, Feb 2019, Lucca, Italy. ⟨hal-02787972⟩
  • Clémence Fraslin, Anastasia Bestin, Nicolas Dechamp, Francine Krieg, Elodie Belmonte, et al.. Masculinisation spontanée chez la truite arc-en-ciel : de nouvelles régions du génome identifiées. 6. Journées de la Recherche Filière Piscicole, Institut Technique de l'Aviculture et des Elevages de Petits Animaux (ITAVI). FRA., Jul 2019, Paris, France. ⟨hal-02182569⟩
  • Jonathan d'Ambrosio, Romain Morvezen, S. Brard-Fudulea, Anastasia Bestin, Pierrick Haffray, et al.. Factors of variation of genomic selection accuracy for female reproduction traits with a constant reference population size of rainbow trouts. Gordon Research Conference - Quantitative genetics and genomics, Feb 2019, Lucca, Italy. ⟨hal-02788345⟩
  • Anastasia Bestin, Yoannah François, Thierry Morin, Mathilde Dupont-Nivet, Marc Vandeputte, et al.. Intégration de caractères de résistance à cinq pathologies dans les schémas de sélection commerciale de truite, bar et daurade. 6. Journées de la Recherche Filière Piscicole, Institut Technique de l'Aviculture et des Elevages de Petits Animaux (ITAVI). FRA., Jul 2019, Paris, France. ⟨hal-02264929⟩
  • Marc Vandeputte, Clémence Fraslin, Pierrick Haffray, Anastasia Bestin, François Allal, et al.. How to genetically increase fillet yield in fish: relevant genetic parameters and methods for the estimation of genetic gain. Aquaculture Europe 2019, Oct 2019, Berlin, Germany. ⟨hal-03187446⟩
  • Marc Vandeputte, Pierrick Haffray, Anastasia Bestin, François Allal, Mathilde Dupont-Nivet. Interaction génotype x aliment: que sait-on, où va-t-on ?. Journée du SFAM, Mar 2019, Montpellier, France. ⟨hal-03187439⟩
  • S. Lachambre, Sabine Roussel, S. Huchette, K. Chenevert, Christophe Lambert, et al.. Mixed-family estimation of genetic parameters of growth, morphologic, immune and behavioral traits in the european abalone Haliotis tuberculata. World Aquaculture 2018, European Aquaculture Society (EAS)., Aug 2018, Montpellier, France. pp.111. ⟨hal-02011386⟩
  • Marc Vandeputte, Jérôme Bugeon, Anastasia Bestin, Alexandre Desgranges, Sebastien Courant, et al.. A first demonstration of realized selection response for fillet yield in fish, in rainbow trout oncorhynchus mykiss. 13. International Symposium for Genetics in Aquaculture (ISGA XIII), Jul 2018, Cairns, Australia. ⟨hal-02264933⟩
  • Jonathan d'Ambrosio, Florence Phocas, Pierrick Haffray, Edwige Quillet, Anastasia Bestin, et al.. Heterogeneity of genetic diversity throughout the genome in rainbow trout populations. International symposium of Genetics in Aquaculture, International Association for Genetics in Aquaculture (IAGA). INT., Jul 2018, Cairns, Australia. ⟨hal-02735029⟩
  • Pierrick Haffray, Anastasia Bestin, Florian Enez, Sébastien Courant, Daniel Guemene, et al.. Genetic parameters of resistance to gastroenteritis (rtge) and rainbow trout fry syndrome (rtfs) in rainbow trout oncorhynchus mykiss and their genetic correlations with production traits. World Aquaculture 2018, Aug 2018, Montpellier, France. ⟨hal-02738108⟩
  • J. d'Ambrosio, Florence Phocas, Pierrick Haffray, Edwige Quillet, Anastasia Bestin, et al.. Genomic estimates of diversity between and within french rainbow trout populations. Aqua 2018 - World Aquaculture Society Meeting, Aug 2018, Montpellier, France. ⟨hal-02193895⟩
  • Martin Prchal, Jérôme Bugeon, Marc Vandeputte, Antti Kause, Alain Vergnet, et al.. Potential for genetic improvement of the main slaughter yields in common carp with in vivo morphological predictors. World Aquaculture 2018, European Aquaculture Society (EAS)., Aug 2018, Montpellier, France. 848 p. ⟨hal-02012648⟩
  • Christos Palaiokostas, Martin Kocour, Tomáš Veselý, Sophie Cariou, Anastasia Bestin, et al.. Breeding for disease resistance in farmed fish in the era of high-throughput sequencing. 11th World Congress on Genetics Applied to Livestock Production, Feb 2018, Auckland, New Zealand. ⟨hal-03156780⟩
  • Romain Morvezen, Anastasia Bestin, Anne-Sophie Tiriau, Laurane Pallandre, Joelle Cabon, et al.. Heritabilities of resistance to VNN and vibriosis and genetic correlations with production traits and processing yields in two selected commercial lines of the European sea bass Dicentrarchus labrax. 13th International Symposium Genetics in Aquaculture, Jul 2018, Cairns, Australia. ⟨hal-03187102⟩
  • Marc Vandeputte, Clémence Fraslin, Jérôme Bugeon, François Allal, Antonio Puledda, et al.. Peut-on sélectionner sur le rendement de filet chez les poissons ? (et chez le bar en particulier). Journée du SFAMN (Syndicat Français de l'Aquaculture Marine et Nouvelle), Mar 2017, Montpellier, France. ⟨hal-03155369⟩
  • Clémence Fraslin, Mathilde Dupont-Nivet, Anastasia Bestin, Pierrick Haffray, Marc Vandeputte. How can we select for fillet yield in fish ? A simulation study. Fish Breeders' Round Table, Jun 2016, Tromso, Norway. ⟨hal-02799957⟩
  • Pierrick Haffray, Dofungo Ouatarra, Sophie Cariou, Jean-Sébastien Bruant, Frederic Ventre, et al.. Genetic parameters of indirect predictors of gutted and fillet yields in the gilthead sea bream Sparus aurata in using 2D camera, 3D digitizer and ultrasound technologies. Aquaculture Europe 2016, Sep 2016, Edinburgh, United Kingdom. 1146 p. ⟨hal-02741462⟩
  • Dofungo Ouatarra, Anastasia Bestin, Pierrick Haffray, Florian Enez, Sophie Cariou, et al.. Utilisation d'imagerie et d'ultrasons pour l'amélioration du rendement en chair par sélection génétique de la daurade. 5. Journées de la Recherche Filière Piscicole, Institut Technique de l'Aviculture et des Elevages de Petits Animaux (ITAVI). FRA., Jul 2016, Paris, France. pp.30. ⟨hal-02741919⟩
  • Anne-Sophie Tyran, Alexandre Desgranges, Anastasia Bestin, Florian Enez, François Allal, et al.. Résistance génétique à l'entérite chez la truite ? Interaction avec la flavobactériose et les caractères de production. 5. Journées de la Recherche Filière Piscicole, Institut Technique de l'Aviculture et des Elevages de Petits Animaux (ITAVI). FRA., Jul 2016, Paris, France. ⟨hal-02743196⟩
  • Clémence Fraslin, Mathilde Dupont-Nivet, Anastasia Bestin, Pierrick Haffray, Marc Vandeputte. Can we select fish for improved fillet yield? A simulation study using base data from three different species. Aquaculture Europe 2016, Sep 2016, Edinburgh, United Kingdom. ⟨hal-01605575⟩
  • Christos Palaiokostas, Sophie Cariou, Anastasia Bestin, Jean-Sébastien Bruant, Pierrick Haffray, et al.. Investigation of genetic resistance to Viral Nervous Necrosis in European sea bass (Dicentrarchus labrax) using RAD sequencing. Aquaculture Europe 2016, Sep 2016, Edinburgh, United Kingdom. ⟨hal-03155244⟩
  • Marc Vandeputte, Antonio Puledda, Anne Sophie Tyran, Anastasia Bestin, Céline Coulombet, et al.. Prédicteurs morphologiques du rendement chez le bar: projet BAR3. Journée Technique Piscicole du Sysaaf, Feb 2016, Paris, France. ⟨hal-02800398⟩
  • Marc Suquet, Pierrick Haffray, Anastasia Bestin, F. Malo, Catherine Labbé. Cryopreservation of Pacific Oyster larvae: a limited but promising survival!. CRB-Anim Biennal Seminar 2015, Centre de Ressources Biologiques pour la Génomique des Animaux d'Elevages et d'Intérêt Economique. FRA., Feb 2015, Paris, France. 22 p. ⟨hal-02743321⟩
  • Anastasia Bestin, Mathilde Dupont-Nivet, Pierrick Haffray, Françoise Médale, Edwige Quillet, et al.. Genotype by diet interactions on growth and processing traits in rainbow trout ([i]Oncorhynchus mykiss[/i]), European sea bass ([i]Dicentrarchus labrax[/i]), gilthead sea bream ([i]Sparus aurata[/i]) and meagre [i](Argyrosomus regius)[/i] fed diets with almost complete substitution of both fish meal and fish oil by vegetal ingredients. 10. World Congress on Genetics Applied to Livestock Production (WCGALP), Aug 2014, Vancouver, Canada. ⟨hal-01194150⟩

Poster communications9 documents

  • Jonathan d'Ambrosio, Florence Phocas, Pierrick Haffray, Edwige Quillet, Anastasia Bestin, et al.. Estimation de la diversité génétique entre et intra lignées françaises de truite arc en ciel. 6. Journées de la Recherche Filière Piscicole, Jul 2019, Paris, France. 2019, Journées de la Recherche Filière Piscicole. ⟨hal-02264930⟩
  • Nicolas Dechamp, Jonathan d'Ambrosio, Frédéric Terrier, Frédéric Cachelou, Anastasia Bestin, et al.. QTLs linked to survival and growth of rainbow trout fed a 100% plant-based diet in rainbow trout since the first meal. Aquaculture Europe 2019, Oct 2019, Berlin, Germany. 1672 p., 2019, Our future: growing from water. ⟨hal-02317174⟩
  • J D'ambrosio, Romain Morvezen, A. Perez, S. Brard-Fudulea, Anastasia Bestin, et al.. Déterminisme génétique et sélection génomique des caractères de reproduction femelle chez la truite arc-en-ciel. 6. Journées de la Recherche Piscicole, Jul 2019, Paris, France. 2019. ⟨hal-02193908⟩
  • Anastasia Bestin, Florian Enez, Francine Krieg, Catherine Denis, Robert Le Coat, et al.. Enquête sur la masculinisation spontanée dans les élevages français de truite arc-en-ciel monosexe femelle. 6. Journées de la Recherche Filière Piscicole, Jul 2019, Paris, France. 2019. ⟨hal-02184266⟩
  • Clémence Fraslin, S. Brard-Fudulea, Jonathan d'Ambrosio, Anastasia Bestin, Mathieu Charles, et al.. RAINBOW TROUT RESISTANCE TO Flavobacterium psychrophilum: A GENOME WIDE ASSOCIATION STUDY IN A FRENCH POPULATION AFTER A NATURAL DISEASE OUTBREAK. AQUA 2018, Aug 2018, Montpellier, France. 2018, AQUA 2018. ⟨hal-01865605⟩
  • Florian Enez, Jérôme Doerflinger, Anne-Sophie Tyran, Anastasia Bestin, Vincent Petit, et al.. Best-Ov : Evaluation des paramètres génétiques des caractères de ponte chez la truite arc-en-ciel. 5. Journées de la Recherche Filière Piscicole, Jul 2016, Paris, France. Journées de la Recherche Filière Piscicole, pp.52, 2016, JRFP 2016. ⟨hal-02743655⟩
  • Y. Fitrianis, B. Wahjudi, S. Muhyi, Benjamin Quittet, Anastasia Bestin, et al.. Combined dam rotational mating and dna-parentage assignment to estimate genetic parameters of growth and quality traits in a mass spawning fish species, the asian sea bass lates calcarifer reared in the java sea. 12. International Symposium on Genetics in Aquaculture (ISGA), Jun 2015, Santiago de Compostela, Spain. ELSEVIER SCIENCE BV, Aquaculture, 472 (Special Issue: SI), 2017, ISGA XII. ⟨hal-02736518⟩
  • Anastasia Bestin, Mathilde Dupont-Nivet, Françoise Médale, Edwige Quillet, Marc Vandeputte, et al.. Variabilité génétique de la capacité de quatre espèces piscicoles à utiliser de l'aliment à forts taux de végétaux. 4. Journées de la Recherche Filière Piscicole, Jul 2014, Paris, France. 2014, 4èmes Journées de la Recherche Filière Piscicole. ⟨hal-01193851⟩
  • Anastasia Bestin, Mathilde Dupont-Nivet, Françoise Médale, Edwige Quillet, Marc Vandeputte, et al.. Comparative additive genetic basis of high feed substitution by plant ingredients in four major fish species farmed in temperate and southern Europe. Aquaculture Europe 2014, Oct 2014, Saint Sébastien, Spain. pp.136, 2014, Adding value. Abstracts. ⟨hal-01193981⟩

Preprints, Working Papers, ...3 documents

  • Heiner Kuhl, Yann Guiguen, Christin Höhne, Eva Kreuz, Du Kang, et al.. A 180 My-old female-specific genome region in sturgeon reveals the oldest known vertebrate sex determining system with undifferentiated sex chromosomes. 2020. ⟨hal-03038088⟩
  • Clémence Fraslin, Florence Phocas, Anastasia Bestin, Mathieu Charles, Maria Bernard, et al.. Genetic determinism of spontaneous masculinisation in XX female rainbow trout: new insights using medium throughput genotyping and whole-genome sequencing. 2020. ⟨hal-03026383⟩
  • Romain Feron, Margot Zahm, Cédric Cabau, Christophe Klopp, Céline Roques, et al.. Characterization of a Y-specific duplication/insertion of the anti-Mullerian hormone type II receptor gene based on a chromosome-scale genome assembly of yellow perch, Perca flavescens. 2019. ⟨hal-02790966⟩