Anamaria Necsulea

Documents

Publications

	Random genetic drift sets an upper limit on mRNA splicing accuracy in metazoans Florian Bénitière , Anamaria Necsulea , Laurent Duret eLife, 2024, 13, pp.RP93629. ⟨10.7554/eLife.93629.3⟩ Article dans une revue hal-04258621v1
	Long-range promoter–enhancer contacts are conserved during evolution and contribute to gene expression robustness Alexandre Laverré , Eric Tannier , Anamaria Necsulea Genome Research, 2022, 32 (2), pp.280-296. ⟨10.1101/gr.275901.121⟩ Article dans une revue hal-03559410v1
	Comparative Transcriptomics Analyses across Species, Organs, and Developmental Stages Reveal Functionally Constrained lncRNAs Fabrice Darbellay , Anamaria Necsulea Molecular Biology and Evolution, 2019, ⟨10.1093/molbev/msz212⟩ Article dans une revue hal-02400709v1
	The fitness cost of mis-splicing is the main determinant of alternative splicing patterns Baptiste Saudemont , Alexandra Popa , Joanna Parmley , Vincent Rocher , Corinne Blugeon Genome Biology, 2017, 18 (1), ⟨10.1186/s13059-017-1344-6⟩ Article dans une revue hal-02321589v1
	Transcriptional response to hepatitis C virus infection and interferon-alpha treatment in the human liver T. Boldanova , A. Suslov , M.H. Heim , A. Necsulea EMBO Molecular Medicine, 2017, 9, pp.816-834. ⟨10.15252/emmm.201607006⟩ Article dans une revue hal-02049665v1
	A role for HOX13 proteins in the regulatory switch between TADs at the HoxD locus L. Beccari , N. Yakushiji-Kaminatsui , J. M. Woltering , A. Necsulea , N. Lonfat Genes and Development, 2016, 30, pp.1172-86. ⟨10.1101/gad.281055.116⟩ Article dans une revue hal-02016391v1
	Control of Hoxd gene transcription in the mammary bud by hijacking a preexisting regulatory landscape R. Schep , A. Necsulea , E. Rodriguez-Carballo , I. Guerreiro , G. Andrey Proceedings of the National Academy of Sciences of the United States of America, 2016, 113 (48), pp.e7720-e7729. ⟨10.1073/pnas.1617141113⟩ Article dans une revue hal-02049880v1
	Hotair Is Dispensible for Mouse Development Ar. Amandio , A. Necsulea , E. Joye , B. Mascrez , D. Duboule PLoS Genetics, 2016, 12, pp.e1006232. ⟨10.1371/journal.pgen.1006232⟩ Article dans une revue hal-02016396v1
	Assessing Recent Selection and Functionality at Long Noncoding RNA Loci in the Mouse Genome R. A. Wiberg , D. L. Halligan , R. W. Ness , A. Necsulea , H. Kaessmann Genome Biology and Evolution, 2015, 7, pp.2432-44. ⟨10.1093/gbe/evv155⟩ Article dans une revue hal-02018996v1
	Cellular Source and Mechanisms of High Transcriptome Complexity in the Mammalian Testis M. Soumillon , A. Necsulea , M. Weier , D. Brawand , X. Zhang Cell Reports, 2013, 3 (6), pp.2179-2190. ⟨10.1016/j.celrep.2013.05.031⟩ Article dans une revue hal-00852777v1
	Meiotic recombination favors the spreading of deleterious mutations in human populations Anamaria Necsulea , L. Duret , Alexandra Popa , David N. Cooper , Peter Stentson Human Mutation, 2011, 32 (2), pp.198-206. ⟨10.1002/humu.21407⟩ Article dans une revue hal-00610795v1
	Monoallelic expression and tissue specificity are associated with high crossover rates A. Necşulea , M. Sémon , L. Duret , L.D. Hurst Trends in Genetics, 2009, 25(12), pp.519-522 Article dans une revue hal-00539368v1
	Complete genome of the cellulolytic thermophile Acidothermus cellulolyticus 11B provides insights into its ecophysiological and evolutionary adaptations Ravi D. Barabote , Gary Xie , David H. Leu , Philippe Normand , Anamaria Necsulea Genome Research, 2009, 19, pp.1033-1043. ⟨10.1101/gr.084848.108⟩ Article dans une revue halsde-00526039v1
	The relationship between DNA replication and human genome organization. Anamaria Necsulea , Claire Guillet , Jean-Charles Cadoret , Marie-Noëlle Prioleau , L. Duret Molecular Biology and Evolution, 2009, 26 (4), pp.729-741. ⟨10.1093/molbev/msn303⟩ Article dans une revue hal-00353551v1
	Parallel Adaptations to High Temperatures in the Archean Eon Bastien Boussau , Samuel Blanquart , Anamaria Necsulea , Nicolas Lartillot , Manolo Gouy Nature, 2008, 456 (7224), pp.942-945. ⟨10.1038/nature07393⟩ Article dans une revue lirmm-00324159v1
	Etude des patrons d`évolution asymétrique dans les séquences d`ADN A. Necşulea incollection, 2008, --, pp.476-482 Article dans une revue hal-00428219v1
	A New Method for Assessing the Effect of Replication on DNA Base Composition Asymmetry A. Necşulea , J.R. Lobry incollection, 2007, 7, pp.379-381 Article dans une revue hal-00434554v1
	A New Method for Assessing the Effect of Replication on DNA Base Composition Asymmetry A. Necşulea , J.R. Lobry Molecular Biology and Evolution, 2007, 24, pp.2169-2179 Article dans une revue hal-00434832v1
	Revisiting the directionnal mutation pressure theory : The analysis of a particular genomic structure in Leishmania major A. Necşulea , J.R. Lobry Gene, 2006, 385, pp.28-40 Article dans une revue hal-00428050v1
	Synonymous codon usage and its potential link with optimal growth temperature in prokaryotes. J.R. Lobry , A. Necşulea Gene, 2006, 385, pp.128-136 Article dans une revue hal-00427983v1

	Phylogenomics and Genome Annotation Anamaria Necsulea Scornavacca, Celine; Delsuc, Frédéric; Galtier, Nicolas. Phylogenetics in the Genomic Era, No commercial publisher \| Authors open access book, pp.4.1:1--4.1:26, 2020 Chapitre d'ouvrage hal-02535669v1

	GOntact: using chromatin contacts to infer Gene Ontology enrichments for cis -regulatory elements Alexandre Laverré , Eric Tannier , Philippe Veber , Anamaria Necsulea 2022 Pré-publication, Document de travail hal-03781024v1

	Etude des patrons d'évolution asymétrique dans les séquences d'ADN Anamaria Necsulea Sciences du Vivant [q-bio]. Université Claude Bernard - Lyon I, 2008. Français. ⟨NNT : ⟩ Thèse tel-00305419v1

Anamaria Necsulea

Publications

Random genetic drift sets an upper limit on mRNA splicing accuracy in metazoans

Long-range promoter–enhancer contacts are conserved during evolution and contribute to gene expression robustness

Comparative Transcriptomics Analyses across Species, Organs, and Developmental Stages Reveal Functionally Constrained lncRNAs

The fitness cost of mis-splicing is the main determinant of alternative splicing patterns

Transcriptional response to hepatitis C virus infection and interferon-alpha treatment in the human liver

A role for HOX13 proteins in the regulatory switch between TADs at the HoxD locus

Control of Hoxd gene transcription in the mammary bud by hijacking a preexisting regulatory landscape

Hotair Is Dispensible for Mouse Development

Assessing Recent Selection and Functionality at Long Noncoding RNA Loci in the Mouse Genome

Cellular Source and Mechanisms of High Transcriptome Complexity in the Mammalian Testis

Meiotic recombination favors the spreading of deleterious mutations in human populations

Monoallelic expression and tissue specificity are associated with high crossover rates

Complete genome of the cellulolytic thermophile Acidothermus cellulolyticus 11B provides insights into its ecophysiological and evolutionary adaptations

The relationship between DNA replication and human genome organization.

Parallel Adaptations to High Temperatures in the Archean Eon

Etude des patrons d`évolution asymétrique dans les séquences d`ADN

A New Method for Assessing the Effect of Replication on DNA Base Composition Asymmetry

A New Method for Assessing the Effect of Replication on DNA Base Composition Asymmetry

Revisiting the directionnal mutation pressure theory : The analysis of a particular genomic structure in Leishmania major

Synonymous codon usage and its potential link with optimal growth temperature in prokaryotes.

Phylogenomics and Genome Annotation

GOntact: using chromatin contacts to infer Gene Ontology enrichments for cis -regulatory elements

Etude des patrons d'évolution asymétrique dans les séquences d'ADN