First microbial gene catalog and antibiotic resistome of rabbit gut microbiota established by metagenomic sequencing
Caroline Achard
,
Yuliaxis Ramayo Caldas
,
Amine Ghozlane
,
Mathieu M. Almeida
,
Maria Ballester Davis Ballester
,
et al.
Symposium INRA ROWETT sur le microbiome du tube digestif. Microflore intestinale : amie ou ennemie ? , Jun 2016, clermont-ferrand, France
Communication dans un congrès
hal-02797803v1
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Antagonism of ALAS1 by the Measles Virus V protein contributes to degradation of the mitochondrial network and promotes interferon response
Pierre Khalfi
,
Rodolphe Suspène
,
Kyle A Raymond
,
Vincent Caval
,
Grégory Caignard
,
et al.
Article dans une revue
pasteur-04086944v1
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Mining zebrafish microbiota reveals key community-level resistance against fish pathogen infection
Franziska A. Stressmann
,
Joaquín Bernal-Bayard
,
David Perez-Pascual
,
Bianca Audrain
,
Olaya Rendueles
,
et al.
Article dans une revue
hal-03240899v1
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Genes mcr improve the intestinal fitness of pathogenic E. coli and balance their lifestyle to commensalism
Guillaume Dalmasso
,
Racha Beyrouthy
,
Sandrine Brugiroux
,
Etienne Ruppé
,
Laurent Guillouard
,
et al.
Article dans une revue
pasteur-04086913v1
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First rabbit gut microbial gene catalog and metagenomic insights into the resistome : links with antibiotic use
Caroline Achard
,
Yuliaxis Ramayo Caldas
,
Amine Ghozlane
,
Mathieu M. Almeida
,
Samuel Boucher
,
et al.
16. International Symposium on Microbial Ecology - ISME16 , Aug 2016, Montréal, Canada
Communication dans un congrès
hal-02792973v1
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SHAMAN: a user-friendly website for metataxonomic analysis from raw reads to statistical analysis
Stevenn Volant
,
Pierre Lechat
,
Perrine Woringer
,
Laurence Motreff
,
Pascal Campagne
,
et al.
Article dans une revue
pasteur-02951458v1
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Combined bacterial and fungal intestinal microbiota analyses: Impact of storage conditions and DNA extraction protocols
Cécile Angebault
,
Amine Ghozlane
,
Stevenn Volant
,
Françoise Botterel
,
Christophe d'Enfert
,
et al.
Article dans une revue
hal-02627752v1
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DAV132, an Adsorbent-Based Product, Protects the Gut Microbiome and Prevents Clostridium difficile Infections During Moxifloxacin Treatments
Jean De Gunzburg
,
Amine Ghozlane
,
Annie Ducher
,
Xavier Marie Duval
,
Etienne Ruppé
,
et al.
IDWeek 2015 , Infectious Diseases Society of America; hiv medicine association, Oct 2015, San Diego, CA, United States. pp.760,
⟨10.1093/ofid/ofv133.477⟩
Communication dans un congrès
pasteur-02552243v1
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Systrip: a visual environment for the investigation of time-series data in the context of metabolic networks
Jonathan Dubois
,
Ludovic Cottret
,
Amine Ghozlane
,
David Auber
,
Frédéric Bringaud
,
et al.
16th International Conference on Information Visualization (IV'12) , Jul 2012, Montpellier, France. pp.4771a204
Communication dans un congrès
hal-00742176v1
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Bacteriocin from epidemic Listeria strains alters the host intestinal microbiota to favor infection
Juan J. Quereda
,
Olivier Dussurget
,
Marie-Anne Nahori
,
Amine Ghozlane
,
Stevenn Volant
,
et al.
Proceedings of the National Academy of Sciences of the United States of America , 2016, 113 (20), pp.5706 - 5711.
⟨10.1073/pnas.1523899113⟩
Article dans une revue
hal-01533881v1
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iRNA: Integrative pipeline for genome-wide detection of sRNA targets
Amine Ghozlane
,
Jonathan Dubois
,
Isabelle Dutour
,
Romain Bourqui
,
Marc Breton
,
et al.
"Autour des ARNs non codant" - Rencontre bioinformatique 2012 , Feb 2012, Toulouse, France
Communication dans un congrès
hal-00695794v1
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A simple, reproducible and cost- effective procedure to analyse gut phageome: from phage isolation to bioinformatic approach
Camille d'Humières
,
Marie Touchon
,
Sara Dion
,
Jean Cury
,
Amine Ghozlane
,
et al.
Article dans une revue
hal-02329655v1
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Capturing the most wanted taxa through cross-sample correlations
Mathieu Almeida
,
Mihai Pop
,
Emmanuelle E. Le Chatelier
,
Edi Prifti
,
Nicolas N. Pons
,
et al.
Article dans une revue
hal-02634020v1
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Etat des lieux de l'antibiorésistance en élevage cunicole français et application du concept d'exclusion compétitive pour limiter la transmission d'un microbiote maternal antibiorésistant
Caroline Achard
,
Véronique Dupouy-Guiraute
,
Susanna Siviglia
,
Nathalie Arpaillange
,
Beatrice Gabinaud
,
et al.
16. Journées de la Recherche Cunicole , Nov 2015, Le Mans, France. 264 p
Communication dans un congrès
hal-02744277v1
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Prediction of the intestinal resistome by a three-dimensional structure-based method
Etienne Ruppé
,
Amine Ghozlane
,
Julien Tap
,
Nicolas Pons
,
Anne-Sophie Alvarez
,
et al.
Article dans une revue
pasteur-02552015v1
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Mining zebrafish microbiota reveals key community-level resistance against fish pathogen infection
Franziska Stressmann
,
Joaquin Bernal-Bayard
,
David Pérez-Pascual
,
Bianca Audrain
,
Olaya Rendueles
,
et al.
2020
Pré-publication, Document de travail
pasteur-02873606v1
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Protection of the Human Gut Microbiome From Antibiotics
Jean de Gunzburg
,
Amine Ghozlane
,
Annie Ducher
,
Emmanuelle Le Chatelier
,
Xavier Marie Duval
,
et al.
Article dans une revue
pasteur-02552147v1
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Impact of the gut microbiota on the m 6 A epitranscriptome of mouse cecum and liver
Sabrina Jabs
,
Anne Biton
,
Christophe Bécavin
,
Marie-Anne Nahori
,
Amine Ghozlane
,
et al.
Article dans une revue
hal-02573165v1
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Développement de méthodes bioinformatiques dédiées à la prédiction et l'analyse des réseaux métaboliques et des ARN non codants
Amine Ghozlane
Informatique [cs]. Université Sciences et Technologies - Bordeaux I, 2012. Français.
⟨NNT : ⟩
Thèse
tel-01086134v1
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A visualization approach to analyse bacterial sRNA-mediated regulatory networks
Jonathan Dubois
,
Amine Ghozlane
,
Patricia Thébault
,
Isabelle Dutour
,
Romain Bourqui
Journées Ouvertes Biologie Informatique Mathématiques (JOBIM 2013) , Jul 2013, France. pp.Poster
Communication dans un congrès
hal-00838731v1
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Visualization of time-series data in the context of metabolic networks with Systrip Software
Jonathan Dubois
,
Ludovic Cottret
,
Amine Ghozlane
,
David Auber
,
Frédéric Bringaud
,
et al.
Journées Ouvertes Biologie Informatique Mathématiques (JOBIM 2013) , Jul 2013, France
Communication dans un congrès
hal-00838725v1
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Genome-wide detection of sRNA targets with rNAV
Jonathan Dubois
,
Amine Ghozlane
,
Patricia Thebault
,
Isabelle Dutour
,
Romain Bourqui
Symposium on Biological Data Visualization , Oct 2013, Atlanta, United States. pp.81 - 88
Communication dans un congrès
hal-00935443v1
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Le gène de résistance mcr-1 favorise l'intrusion de E. coli dans l'écosystème intestinal
Guillaume Dalmasso
,
Racha Beyrouthy
,
Sandrine Brugiroux
,
Pierre Saint-Sardos
,
Etienne Ruppé
,
et al.
RICAI 2020 , Dec 2020, PARIS, France
Poster de conférence
hal-03054071v1
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Carryover effects of larval exposure to different environmental bacteria drive adult trait variation in a mosquito vector
Laura B Dickson
,
Davy Jiolle
,
Guillaume Minard
,
Isabelle Moltini-Conclois
,
Stevenn Volant
,
et al.
Article dans une revue
hal-01580399v1
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Wide diversity of methane and short-chain alkane metabolisms in uncultured archaea
Guillaume Borrel
,
Panagiotis S Adam
,
Luke J Mckay
,
Lin-Xing Chen
,
Isabel Natalia Sierra-García
,
et al.
Article dans une revue
pasteur-02059013v1
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A Clinical Study Provides the First Direct Evidence That Interindividual Variations in Fecal β-Lactamase Activity Affect the Gut Mycobiota Dynamics in Response to β-Lactam Antibiotics
Margot Delavy
,
Charles Burdet
,
Natacha Sertour
,
Savannah Devente
,
Jean-Denis Docquier
,
et al.
Article dans une revue
pasteur-04017287v1
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Diverse laboratory colonies of Aedes aegypti harbor the same adult midgut bacterial microbiome
Laura B Dickson
,
Amine Ghozlane
,
Stevenn Volant
,
Christiane Bouchier
,
Laurence Ma
,
et al.
Article dans une revue
pasteur-01973524v1
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Analysis of protein chameleon sequence characteristics.
Amine Ghozlane
,
Agnel Joseph
,
Aurélie Bornot
,
Alexandre de Brevern
Bioinformation , 2009, 3 (9), pp.367-9
Article dans une revue
inserm-00353122v1
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Flux analysis of the Trypanosoma brucei glycolysis based on a multi-objective criteria bioinformatic approach, Advances in Bioinfromatics, 2012, in press. International conference with published acts
Amine Ghozlane
,
Frédéric Bringaud
,
Hayssam Soueidan
,
Isabelle Dutour
,
Fabien Jourdan
,
et al.
Article dans une revue
hal-00723179v1
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Metaboflux : a method to analyze flux distribution in metabolic networks
Amine Ghozlane
,
Frédéric Bringaud
,
Fabien Jourdan
,
Patricia Thebault
Workshop Metabolomics2010, AmsterdamRAI, the Netherlands , 2010, Amsterdam, Netherlands
Communication dans un congrès
hal-00648759v1
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