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Characterization of plant microRNA-encoded peptides (miPEPs) reveals molecular mechanisms from the translation to activity and specificity

 Dominique Lauressergues , Mélanie Ormancey , Bruno Guillotin , Hélène San Clemente , Laurent Camborde , et al.
Cell Reports, 2022, 38 (6), pp.110339. ⟨10.1016/j.celrep.2022.110339⟩
Article dans une revue hal-03602110v1
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MoMA-LoopSampler: A web server to exhaustively sample protein loop conformations

 Amélie Barozet , Kevin Molloy , Marc Vaisset , Christophe Zanon , Pierre Fauret , et al.
Bioinformatics, 2022, 38 (2), pp.552-553. ⟨10.1093/bioinformatics/btab584⟩
Article dans une revue hal-03326493v1
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Current approaches to flexible loop modeling

 Amélie Barozet , Pablo Chacón , Juan Cortés
Current Research in Structural Biology, 2021, 3, pp.187-191. ⟨10.1016/j.crstbi.2021.07.002⟩
Article dans une revue hal-03318652v1
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Conformational changes in antibody Fab fragments upon binding and their consequences on the performance of docking algorithms

 Amélie Barozet , Marc Bianciotto , Thierry Simeon , Hervé Minoux , Juan Cortés
Immunology Letters, 2018, 200, pp.5-15. ⟨10.1016/j.imlet.2018.06.002⟩
Article dans une revue hal-01823695v1
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A Reinforcement-Learning-Based Approach to Enhance Exhaustive Protein Loop Sampling

 Amélie Barozet , Kevin Molloy , Marc Vaisset , Thierry Simeon , Juan Cortés
Bioinformatics, 2020, 36 (4), pp.1099-1106. ⟨10.1093/bioinformatics/btz684⟩
Article dans une revue hal-02289207v1
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Development and assessment of protein loop modeling methods : Application to CDR loops in antibodies

 Amelie Barozet
Automatic. INSA de Toulouse, 2019. English. ⟨NNT : 2019ISAT0040⟩
Thèse tel-03474086v2
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Protein loops with multiple meta-stable conformations: a challenge for sampling and scoring methods

 Amélie Barozet , Marc Bianciotto , Marc Vaisset , Thierry Simeon , Hervé Minoux , et al.
Proteins - Structure, Function and Bioinformatics, 2021, 89 (2), pp.218-231. ⟨10.1002/prot.26008⟩
Article dans une revue hal-02947409v1
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Predicting secondary structure propensities in IDPs using simple statistics from three-residue fragments

 Alejandro N Estaña , Amélie Barozet , Assia Mouhand , Marc Vaisset , Christophe Zanon , et al.
Journal of Molecular Biology, 2020, 342 (19), pp.5447-5459. ⟨10.1016/j.jmb.2020.07.026⟩
Article dans une revue hal-02920302v1
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Conformational buffering underlies functional selection in intrinsically disordered protein regions

 Nicolás González-Foutel , Juliana Glavina , Wade Borcherds , Matías Safranchik , Susana Barrera-Vilarmau , et al.
Nature Structural and Molecular Biology, 2022, 29 (8), pp.781-790. ⟨10.1038/s41594-022-00811-w⟩
Article dans une revue hal-03767337v1
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