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Using diffusion MRI for classification and prediction of Alzheimer's Disease: a reproducible study

 Junhao Wen , Jorge Samper-Gonzalez , Simona Bottani , Alexandre Routier , Ninon Burgos , et al.
AAIC 2018 - Alzheimer's Association International Conference, Jul 2018, Chicago, United States
Communication dans un congrès hal-01758167v2
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Reproducible evaluation of Alzheimer's Disease classification from MRI and PET data

 Jorge Samper-Gonzalez , Simona Bottani , Ninon Burgos , Sabrina Fontanella , Pascal Lu , et al.
Annual meeting of the Organization for Human Brain Mapping - OHBM 2018, Jun 2018, Singapour, Singapore
Communication dans un congrès hal-01761666v1
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A mixed-effects model with time reparametrization for longitudinal univariate manifold-valued data

 Jean-Baptiste Schiratti , Stéphanie Allassonniere , Alexandre Routier , Olivier Colliot , Stanley Durrleman
IPMI - Information Processing in Medical Imaging , Sebastien Ourselin, Daniel C. Alexander, Carl-Fredrik Westin, M. Jorge Cardoso, Jun 2015, Sleat, Isle of Skye, United Kingdom. pp.564-575
Communication dans un congrès hal-01163213v1
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How serious is data leakage in deep learning studies on Alzheimer's disease classification?

 Junhao Wen​ , Elina Thibeau--Sutre​ , Jorge Samper-González​ , Alexandre M Routier , Simona Bottani​ , et al.
2019 OHBM Annual meeting - Organization for Human Brain Mapping, Jun 2019, Rome, Italy
Communication dans un congrès hal-02105133v2
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Lateral Temporal Lobe: An Early Imaging Marker of the Presymptomatic GRN Disease?

 Paola Caroppo , Marie-Odile Habert , Stanley Durrleman , Aurélie Funkiewiez , Vincent Perlbarg , et al.
Journal of Alzheimer's Disease, 2015, 47 (3), pp.751-9. ⟨10.3233/JAD-150270⟩
Article dans une revue hal-01220380v1
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Standardized evaluation of algorithms for computer-aided diagnosis of dementia based on structural MRI: the CADDementia challenge.

 Esther E Bron , Marion Smits , Wiesje M van Der Flier , Hugo Vrenken , Frederik Barkhof , et al.
NeuroImage, 2015, 111, pp.562-79. ⟨10.1016/j.neuroimage.2015.01.048⟩
Article dans une revue hal-01220123v1

Multimodal neuroimaging study in presymptomatic GRN mutations carriers

 Paola Caroppo , Marie-Odile Habert , Stanley Durrleman , Hugo Bertin , Alexandre Routier , et al.
9th International Conference on Frontotemporal Dementias (ICFTD), Oct 2014, Vancouver, Canada
Communication dans un congrès hal-01114134v1
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Clinica: an open source software platform for reproducible clinical neuroscience studies

 Alexandre Routier , Jérémy Guillon , Ninon Burgos , Jorge Samper-Gonzalez , Junhao Wen , et al.
Annual meeting of the Organization for Human Brain Mapping - OHBM 2018, Jun 2018, Singapore, Singapore
Communication dans un congrès hal-01760658v1
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Beware of feature selection bias! Example on Alzheimer's disease classification from diffusion MRI

 Junhao Wen​ , Jorge Samper-González​ , Alexandre M Routier , Simona Bottani​ , Stanley Durrleman​ , et al.
2019 OHBM Annual Meeting - Organization for Human Brain Mapping, Jun 2019, Rome, Italy
Communication dans un congrès hal-02105134v2
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Statistical learning of spatiotemporal patterns from longitudinal manifold-valued networks

 Igor Koval , Jean-Baptiste Schiratti , Alexandre Routier , Michael Bacci , Olivier Colliot , et al.
Medical Image Computing and Computer Assisted Intervention, Sep 2017, Quebec City, Canada
Communication dans un congrès hal-01540828v1
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The White Matter Module-Hub Network of Semantics Revealed by Semantic Dementia

 Martina Sundqvist , Alexandre Routier , Bruno Dubois , Olivier Colliot , Marc Teichmann
Journal of Cognitive Neuroscience, 2020, pp.1-18. ⟨10.1162/jocn_a_01549⟩
Article dans une revue hal-02554966v1
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NODDI Highlights Promising New Markers In Presymptomatic C9orf72 Carriers

 Junhao Wen , Hui Zhang , Daniel Alexander , Stanley Durrleman , Alexandre Routier , et al.
OHBM 2018 - Organization for Human Brain Mapping Annual Meeting, Jun 2018, Singapour, Singapore
Communication dans un congrès hal-01758137v1
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Double diffeomorphism: combining morphometry and structural connectivity analysis

 Pietro Gori , Olivier Colliot , Linda Marrakchi Kacem , Yulia Worbe , Alexandre Routier , et al.
IEEE Transactions on Medical Imaging, 2018, 37 (9), pp.2033-2043. ⟨10.1109/TMI.2018.2813062⟩
Article dans une revue hal-01709847v2
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Joint Morphometry of Fiber Tracts and Gray Matter structures using Double Diffeomorphisms

 Pietro Gori , Olivier Colliot , Linda Marrakchi-Kacem , Yulia Worbe , Alexandre Routier , et al.
IPMI - Information Processing in Medical Imaging, Jun 2015, Isle of Skye, United Kingdom. pp.275-287, ⟨10.1007/978-3-319-19992-4_21⟩
Communication dans un congrès hal-01142628v1
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New advances in the Clinica software platform for clinical neuroimaging studies

 Alexandre Routier , Arnaud Marcoux , Mauricio Diaz Melo , Jérémy Guillon , Jorge Samper-González , et al.
OHBM 2019 - Annual Meeting on Organization for Human Brain Mapping, Jun 2019, Roma, Italy. ⟨10.1016/j.neuroimage.2011.09.015⟩
Communication dans un congrès hal-02132147v2
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Spatio-Temporal Shape Analysis of Cross-Sectional Data for Detection of Early Changes in Neurodegenerative Disease

 Claire Cury , Marc M Lorenzi , David M Cash , Jennifer M Nicholas , Alexandre M Routier , et al.
SeSAMI 2016 - First International Workshop Spectral and Shape Analysis in Medical Imaging, Sep 2016, Athens, Greece. pp.63 - 75, ⟨10.1007/978-3-319-51237-2_6⟩
Communication dans un congrès hal-01440061v1
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Neurite density is reduced in the presymptomatic phase of C9orf72 disease

 Junhao Wen , Hui Zhang , Daniel C Alexander , Stanley Durrleman , Alexandre Routier , et al.
Journal of Neurology, Neurosurgery and Psychiatry, 2019, J Neurol Neurosurg Psychiatry, 90 (4), pp.387-94. ⟨10.1136/jnnp-2018-318994⟩
Article dans une revue hal-01907482v1
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Clinica: an open-source software platform for reproducible clinical neuroscience studies

 Omar El-Rifai , Mauricio Diaz Melo , Ravi Hassanaly , Matthieu Joulot , Alexandre M Routier , et al.
MRI Together 2021 - A global workshop on Open Science and Reproducible MR Research, Dec 2021, Online, France
Communication dans un congrès hal-03513920v1
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Comparison of DTI Features for the Classification of Alzheimer's Disease: A Reproducible Study

 Junhao Wen , Jorge Samper-Gonzalez , Simona Bottani , Alexandre Routier , Ninon Burgos , et al.
OHBM 2018 - Organization for Human Brain Mapping Annual Meeting, Jun 2018, Singapour, Singapore
Communication dans un congrès hal-01758206v3
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The structure of the mental lexicon: what primary progressive aphasias reveal

 Clara Sanches , Alexandre Routier , Olivier Colliot , Marc Teichmann
Neuropsychologia, 2018, 109, pp.107-115. ⟨10.1016/j.neuropsychologia.2017.12.018⟩
Article dans une revue hal-01672932v1

Cerebral microbleeds and CSF Alzheimer biomarkers in primary progressive aphasias

 Aline Mendes , Anne Bertrand , Foudil Lamari , Olivier Colliot , Alexandre Routier , et al.
Neurology, 2018, 90 (12), pp.e1057 - e1065. ⟨10.1212/WNL.0000000000005165⟩
Article dans une revue hal-01820415v1
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Clinica: an open source software platform for reproducible clinical neuroscience studies

 Alexandre Routier , Ninon Burgos , Mauricio Diaz , Michael Bacci , Simona Bottani , et al.
Frontiers in Neuroinformatics, 2021, 15, pp.689675. ⟨10.3389/fninf.2021.689675⟩
Article dans une revue hal-02308126v4
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Spatiotemporal Propagation of the Cortical Atrophy: Population and Individual Patterns

 Igor Koval , Jean-Baptiste Schiratti , Alexandre M Routier , Michael Bacci , Olivier Colliot , et al.
Frontiers in Neurology, 2018, 9, pp.235. ⟨10.3389/fneur.2018.00235⟩
Article dans une revue hal-01910400v1
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New longitudinal and deep learning pipelines in the Clinica software platform

 Alexandre Routier , Arnaud Marcoux , Mauricio Diaz Melo , Jorge Samper-González , Adam Wild , et al.
OHBM 2020 - Annual meeting of the Organization for Human Brain Mapping, Jun 2020, Montreal / Virtual, Canada
Communication dans un congrès hal-02549242v1
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Unified analysis of shape and structural connectivity of neural pathways

 Pietro Gori , Olivier Colliot , Linda Marrakchi-Kacem , Yulia Worbe , Alexandre Routier , et al.
Organisation for Human Brain Mapping, 2015, Honolulu, United States
Communication dans un congrès hal-01187461v1
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Evaluation of morphometric descriptors of deep brain structures for the automatic classification of patients with Alzheimer’s disease, mild cognitive impairment and elderly controls

 Alexandre Routier , Pietro Gori , Ana B. Graciano Fouquier , Sophie Lecomte , Olivier Colliot , et al.
MICCAI Workshop, Sep 2014, Cambridge, United States. pp.8
Communication dans un congrès hal-01099081v1
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Deformetrica: a software for statistical analysis of anatomical shapes

 Alexandre Routier , Marcel Prastawa , Benjamin Charlier , Cédric Doucet , Joan Alexis Glaunès , et al.
21st Annual Meeting of the Organization for Human Brain Mapping, OHBM 2015, Jun 2015, Honolulu, United States
Communication dans un congrès hal-01187469v1
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An Automated Pipeline for the Analysis of PET Data on the Cortical Surface

 Arnaud Marcoux , Ninon Burgos , Anne Bertrand , Marc Teichmann , Alexandre Routier , et al.
Frontiers in Neuroinformatics, 2018, 12, ⟨10.3389/fninf.2018.00094⟩
Article dans une revue hal-01950933v1
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Advances in the Clinica software platform for clinical neuroimaging studies

 Omar El Rifai , Mauricio Diaz Melo , Ravi Hassanaly , Matthieu Joulot , Alexandre M Routier , et al.
OHBM 2022 - Annual meeting of the Organization for Human Brain Mapping, Jun 2022, Glasgow, United Kingdom
Communication dans un congrès hal-03728243v1
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ClinicaDL: an open-source deep learning software for reproducible neuroimaging processing

 Elina Thibeau-Sutre , Mauricio Diaz , Ravi Hassanaly , Alexandre M Routier , Didier Dormont , et al.
3IA Doctoral Workshop, Nov 2021, Toulouse, France
Poster de conférence hal-03423072v2
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