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Exonic Splicing Mutations Are More Prevalent than Currently Estimated and Can Be Predicted by Using In Silico Tools

Omar Soukarieh , Pascaline Gaildrat , Mohamad Hamieh , Aurélie Drouet , Stéphanie Baert-Desurmont , et al.
PLoS Genetics, 2016, 12 (1), pp.e1005756. ⟨10.1371/journal.pgen.1005756⟩
Article dans une revue inserm-02160189v1

Multiple sequence variants of BRCA2 exon 7 alter splicing regulation

Pascaline Gaildrat , Sophie E. Krieger , Daniela Di Giacomo , Julie Abdat , Françoise Révillion , et al.
Journal of Medical Genetics, 2012, 49 (10), pp.609-617. ⟨10.1136/jmedgenet-2012-100965⟩
Article dans une revue istex hal-02336313v1

Use of Splicing Reporter Minigene Assay to Evaluate the Effect on Splicing of Unclassified Genetic Variants

Pascaline Gaildrat , Audrey Killian , Alexandra Martins , Isabelle Tournier , Thierry Frebourg , et al.
Methods Mol Biol, pp.249-257, 2010, ⟨10.1007/978-1-60761-759-4_15⟩
Chapitre d'ouvrage hal-02336373v1

Genetic variants of prospectively demonstrated phenocopies in BRCA1/2 kindreds

Mev Dominguez-Valentin , D. Gareth R. Evans , Sigve Nakken , Hélène Tubeuf , Daniel Vodak , et al.
Hereditary Cancer in Clinical Practice, 2018, 16 (1), ⟨10.1186/s13053-018-0086-0⟩
Article dans une revue hal-02336104v1

A survey of the clinicopathological and molecular characteristics of patients with suspected Lynch syndrome in Latin America

Benedito Mauro Rossi , Edenir Inêz Palmero , Francisco López-Kostner , Carlos Sarroca , Carlos Alberto Vaccaro , et al.
BMC Cancer, 2017, 17 (1), ⟨10.1186/s12885-017-3599-4⟩
Article dans une revue hal-02336124v1
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THE BRCA1 c.5434C>G (p.PRO1812ALA) VARIANT INDUCES A DELETERIOUS EXON 23 SKIPPING BY AFFECTING EXONIC SPLICING REGULATORY ELEMENTS

Pascaline Gaildrat , Sophie Krieger , Jean-Christophe Thery , Audrey Killian , Antoine Rousselin , et al.
Journal of Medical Genetics, 2010, 47 (6), pp.398. ⟨10.1136/jmg.2009.074047⟩
Article dans une revue hal-00557379v1
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Alternative splicing and ACMG-AMP-2015-based classification of PALB2 genetic variants: an ENIGMA report

Irene Lopez-Perolio , Raphaël Leman , Raquel Behar , Vanessa Lattimore , John F. Pearson , et al.
Journal of Medical Genetics, 2019, 56 (7), pp.453-460. ⟨10.1136/jmedgenet-2018-105834⟩
Article dans une revue hal-02194498v1

Detecting splicing patterns in genes involved in hereditary breast and ovarian cancer

Grégoire Davy , Antoine Rousselin , Nicolas Goardon , Laurent Castéra , Valentin Harter , et al.
European Journal of Human Genetics, 2017, 25 (10), pp.1147-1154. ⟨10.1038/ejhg.2017.116⟩
Article dans une revue hal-02336114v1

Assessment of the InSiGHT Interpretation Criteria for the Clinical Classification of 24 MLH1 and MSH2 Gene Variants

Rossella Tricarico , Mariann Kasela , Cristina Mareni , Bryony Thompson , Aurélie Drouet , et al.
Human Mutation, 2017, 38 (1), pp.64-77. ⟨10.1002/humu.23117⟩
Article dans une revue hal-02336175v1
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Contribution of bioinformatics predictions and of functional splicing assays to the interpretation of unclassified variants of the BRCA genes

Jean Christophe Théry , Sophie Krieger , Pascaline Gaildrat , Françoise Révillon , Marie-Pierre Buisine , et al.
European Journal of Human Genetics, 2011, ⟨10.1038/ejhg.2011.100⟩
Article dans une revue hal-00652134v1

Combined genetic and splicing analysis of BRCA1 c.[594-2A>C; 641A>G] highlights the relevance of naturally occurring in-frame transcripts for developing disease gene variant classification algorithms

Miguel de La Hoya , Omar Soukarieh , Irene Lopez-Perolio , Ana Vega , Logan Walker , et al.
Human Molecular Genetics, 2016, 25 (11), pp.2256-2268. ⟨10.1093/hmg/ddw094⟩
Article dans une revue hal-02336165v1

Calibration of Pathogenicity Due to Variant-Induced Leaky Splicing Defects by Using BRCA2 Exon 3 as a Model System

Hélène Tubeuf , Sandrine M. Caputo , Teresa Sullivan , Julie Rondeaux , Sophie Krieger , et al.
Cancer Research, 2020, 80 (17), pp.3593-3605. ⟨10.1158/0008-5472.CAN-20-0895⟩
Article dans une revue hal-03597164v1

SPiP: Splicing Prediction Pipeline, a machine learning tool for massive detection of exonic and intronic variant effects on mRNA splicing

Raphaël Leman , Béatrice Parfait , Dominique Vidaud , Emmanuelle Girodon , Laurence Pacot , et al.
Human Mutation, 2022, 43 (12), pp.2308-2323. ⟨10.1002/humu.24491⟩
Article dans une revue hal-04188077v1
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Novel diagnostic tool for prediction of variant spliceogenicity derived from a set of 395 combined in silico/in vitro studies: an international collaborative effort

Raphael Leman , Pascaline Gaildrat , Gerald L. Gac , Chandran Ka , Yann Fichou , et al.
Nucleic Acids Research, 2018, 46 (15), pp.7913-7923. ⟨10.1093/nar/gky372⟩
Article dans une revue hal-01910334v1

Biallelic Loss of Function of SORL1 in an Early Onset Alzheimer’s Disease Patient

Kilan Le Guennec , Hélène Tubeuf , Didier Hannequin , David Wallon , Olivier Quenez , et al.
Journal of Alzheimer's Disease, 2018, 62 (2), pp.821-831. ⟨10.3233/JAD-170981⟩
Article dans une revue hal-02356252v1

Is BRCA2 involved in early onset colorectal cancer risk?

Mathilde Gay‐bellile , Maud Privat , Alexandra Martins , Sandrine Caputo , Céline Pebrel‐richard , et al.
Clinical Genetics, 2020, 97 (4), pp.668-669. ⟨10.1111/cge.13679⟩
Article dans une revue hal-02518337v1
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Full in-frame exon 3 skipping of BRCA2 confers high risk of breast and/or ovarian cancer

Sandrine Caputo , Mélanie Léoné , Francesca Damiola , Asa Ehlen , Aura Carreira , et al.
Oncotarget, 2018, 9 (9), pp.17334-17348. ⟨10.18632/oncotarget.24671⟩
Article dans une revue hal-01928011v1

A rare SMN2 variant in a previously unrecognized composite splicing regulatory element induces exon 7 inclusion and reduces the clinical severity of spinal muscular atrophy

Myriam Vezain , Pascale Saugier-Veber , Elisa Goina , Renaud Touraine , Vã©ronique Manel , et al.
Human Mutation, 2010, 31 (1), pp.E1110-E1125. ⟨10.1002/humu.21173⟩
Article dans une revue istex hal-02336380v1

Identification of genetic variants for clinical management of familial colorectal tumors

Mev Dominguez-Valentin , Sigve Nakken , Hélène Tubeuf , Daniel Vodak , Per Olaf Ekstrøm , et al.
BMC Medical Genetics, 2018, 19 (1), ⟨10.1186/s12881-018-0533-9⟩
Article dans une revue hal-02336093v1

Application of a 5-tiered scheme for standardized classification of 2,360 unique mismatch repair gene variants in the InSiGHT locus-specific database

Bryony Thompson , Amanda Spurdle , John-Paul Plazzer , Marc Greenblatt , Kiwamu Akagi , et al.
Nature Genetics, 2014, 46 (2), pp.107-115. ⟨10.1038/ng.2854⟩
Article dans une revue hal-02336401v1

Skipping Nonsense to Maintain Function: The Paradigm of BRCA2 Exon 12

Laëtitia Meulemans , Romy L.S. Mesman , Sandrine Caputo , Sophie Krieger , Marine Guillaud-Bataille , et al.
Cancer Research, 2020, 80 (7), pp.1374-1386. ⟨10.1158/0008-5472.CAN-19-2491⟩
Article dans une revue hal-02929535v1
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Mutations in Citron Kinase Cause Recessive Microlissencephaly with Multinucleated Neurons

Brian N. Harding , Amanda Moccia , Séverine Drunat , Omar Soukarieh , Hélène Tubeuf , et al.
American Journal of Human Genetics, 2016, 99 (2), pp.511-520. ⟨10.1016/j.ajhg.2016.07.003⟩
Article dans une revue hal-02324787v1

A large fraction of unclassified variants of the mismatch repair genes MLH1 and MSH2 is associated with splicing defects

Isabelle Tournier , Myriam Vezain , Alexandra Martins , Francoise Charbonnier , Stéphanie Baert-Desurmont , et al.
Human Mutation, 2008, 29 (12), pp.1412-1424. ⟨10.1002/humu.20796⟩
Article dans une revue hal-02336389v1

Functional Analysis of a Large set of BRCA2 exon 7 Variants Highlights the Predictive Value of Hexamer Scores in Detecting Alterations of Exonic Splicing Regulatory Elements

Daniela Di Giacomo , Pascaline Gaildrat , Anna Abuli , Julie Abdat , Thierry Frebourg , et al.
Human Mutation, 2013, 34 (11), pp.1547-1557. ⟨10.1002/humu.22428⟩
Article dans une revue istex hal-02336301v1

Potentially pathogenic germline CHEK2 c.319+2T>A among multiple early-onset cancer families

Mev Dominguez-Valentin , Sigve Nakken , Hélène Tubeuf , Daniel Vodak , Per Olaf Ekstrøm , et al.
Familial Cancer, 2018, 17 (1), pp.141-153. ⟨10.1007/s10689-017-0011-0⟩
Article dans une revue hal-02336151v1

Contribution of bioinformatics predictions and functional splicing assays to the interpretation of unclassified variants of the BRCA genes

Jean Christophe Théry , Sophie E. Krieger , Pascaline Gaildrat , Françoise Révillion , Marie-Pierre Buisine , et al.
European Journal of Human Genetics, 2011, 19 (10), pp.1052-1058. ⟨10.1038/ejhg.2011.100⟩
Article dans une revue hal-02336344v1

A leaky splicing mutation affecting SMN1 exon 7 inclusion explains an unexpected mild case of spinal muscular atrophy

Myriam Vezain , Bénédicte Gérard , Séverine Drunat , Benoît Funalot , Séverine Fehrenbach , et al.
Human Mutation, 2011, 32 (9), pp.989-994. ⟨10.1002/humu.21528⟩
Article dans une revue istex hal-02336367v1

Clinical and molecular characterization of cystinuria in a French cohort: relevance of assessing large-scale rearrangements and splicing variants

Pascaline Gaildrat , Saïd Lebbah , Abdellah Tebani , Bénédicte Sudrié-Arnaud , Isabelle Tostivint , et al.
Molecular Genetics & Genomic Medicine, 2017, 5 (4), pp.373-389. ⟨10.1002/mgg3.294⟩
Article dans une revue hal-02336138v1