INTerface Builder: a fast protein-protein interface reconstruction tool
Chloé Dequeker
,
Elodie Laine
,
Alessandra Carbone
Article dans une revue
hal-01617113v1
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COVTree: Coevolution in OVerlapped sequences by Tree analysis server
Elin Teppa
,
Diego J Zea
,
Francesco Oteri
,
Alessandra Carbone
Article dans une revue
hal-02586132v1
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Periodic distributions of hydrophobic amino acids allows the definition of fundamental building blocks to align distantly related proteins
J. Baussand
,
C. Deremble
,
A. Carbone
Article dans une revue
istex
hal-03911491v1
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Duplication of directed graphs and exponential blow up of proofs
Alessandra Carbone
Article dans une revue
hal-03911522v1
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Co-evolution and information signals in biological sequences
Alessandra Carbone
,
Linda Dib
Article dans une revue
hal-03911442v1
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Identification of Plasmodium falciparum nuclear proteins by mass spectrometry and proposed protein annotation
Sylvie Briquet
,
Asma Ourimi
,
Cédric Pionneau
,
Juliana Bernardes
,
Alessandra Carbone
,
et al.
Article dans une revue
hal-01927646v1
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“Infostery” analysis of short molecular dynamics simulations identifies highly sensitive residues and predicts deleterious mutations
Yasaman Karami
,
Tristan Bitard-Feildel
,
Elodie Laine
,
Alessandra Carbone
Article dans une revue
hal-01911176v1
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Predicting substitutions to modulate disorder and stability in coiled-coils
Yasaman Karami
,
Paul Saighi
,
Rémy Vanderhaegen
,
Denis Gerlier
,
Sonia Longhi
,
et al.
Article dans une revue
hal-03911459v1
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Cycles of relatively prime length and the road coloring problem
Alessandra Carbone
Article dans une revue
istex
hal-03911644v1
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Predicted human structural clusters of miRNAs target cancer genes
Anthony Mathelier
,
Alessandra Carbone
Atlas of Genetics and Cytogenetics in Oncology and Haematology , 2014
Article dans une revue
hal-01589482v1
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Co-evolution and Information Signals in Biological Sequences
Alessandra Carbone
,
Linda Dib
Theory and Applications of Models of Computation , 5532, Springer Berlin Heidelberg, pp.6-17, 2009, Lecture Notes in Computer Science,
⟨10.1007/978-3-642-02017-9_4⟩
Chapitre d'ouvrage
hal-03695795v1
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Improvement in Protein Domain Identification Is Reached by Breaking Consensus, with the Agreement of Many Profiles and Domain Co-occurrence
Juliana Bernardes
,
Gerson Zaverucha
,
Catherine Vaquero
,
Alessandra Carbone
Article dans une revue
hal-01390566v1
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Local Geometry and Evolutionary Conservation of Protein Surfaces Reveal the Multiple Recognition Patches in Protein-Protein Interactions
Elodie Laine
,
Alessandra Carbone
Article dans une revue
hal-01274084v1
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Extracting Coevolving Characters from a Tree of Species
Alessandra Carbone
Chapitre d'ouvrage
hal-01588573v1
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A Combinatorial Approach to Detect Coevolved Amino Acid Networks in Protein Families of Variable Divergence
Julie Baussand
,
Alessandra Carbone
Article dans une revue
hal-03911453v1
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Soft disorder modulates the assembly path of protein complexes
Beatriz Seoane
,
Alessandra Carbone
Article dans une revue
hal-03911376v1
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A discriminative method for family-based protein remote homology detection that combines inductive logic programming and propositional models
Juliana Bernardes
,
Alessandra Carbone
,
Gerson Zaverucha
Article dans une revue
hal-03911431v1
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Logical structures and genus of proofs
Alessandra Carbone
Article dans une revue
hal-03911456v1
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Joint evolutionary trees: a large-scale method to predict protein interfaces based on sequence sampling.
Stefan Engelen
,
Ladislas A. Trojan
,
Sophie Sacquin-Mora
,
Richard Lavery
,
Alessandra Carbone
Article dans une revue
inserm-00705756v1
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Inconsistent Distances in Substitution Matrices can be Avoided by Properly Handling Hydrophobic Residues
Julie Baussand
,
Alessandra Carbone
Article dans une revue
hal-03911471v1
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JET2 Viewer: a database of predicted multiple, possibly overlapping, protein–protein interaction sites for PDB structures
Hughes Ripoche
,
Elodie Laine
,
Nicoletta Ceres
,
Alessandra Carbone
Article dans une revue
hal-01417190v1
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Coevolution analysis of Hepatitis C virus genome to identify the structural and functional dependency network of viral proteins
Raphaël Champeimont
,
Elodie Laine
,
Shuang-Wei Hu
,
Francois Penin
,
Alessandra Carbone
Article dans une revue
hal-01320023v1
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Plasmobase: a comparative database of predicted domain architectures for Plasmodium genomes
Juliana Bernardes
,
Catherine Vaquero
,
Alessandra Carbone
Article dans une revue
hal-01556734v1
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Coding and geometrical shapes in nanostructures: A fractal DNA-assembly
Alessandra Carbone
,
Nadrian Seeman
Article dans une revue
istex
hal-03911679v1
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Pathways of deduction
Alessandra Carbone
Luciano Boi.
Geometries Of Nature, Living Systems And Human Cognition: New Interactions of mathematics with natural sciences and humanities , World Scientific, pp.383-400, 2005, 978-981-256-474-0.
⟨10.1142/9789812700889_0008⟩
Chapitre d'ouvrage
hal-03911789v1
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Multiple protein-DNA interfaces unravelled by evolutionary information, physico-chemical and geometrical properties
Flavia Corsi
,
Richard Lavery
,
Elodie Laine
,
Alessandra Carbone
Article dans une revue
hal-02613775v1
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Asymptotic Cyclic Expansion and Bridge Groups of Formal Proofs
Alessandra Carbone
Article dans une revue
hal-03911647v1
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Annotating unknown species of urban microorganisms on a global scale unveils novel functional diversity and local environment association
Jun Wu
,
David Danko
,
Ebrahim Afshinnekoo
,
Daniela Bezdan
,
Malay Bhattacharyya
,
et al.
Article dans une revue
hal-03916679v1
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Codon Bias is a Major Factor Explaining Phage Evolution in Translationally Biased Hosts
Alessandra Carbone
Article dans une revue
istex
hal-03911476v1
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Rosser Orderings in Bimodal Logics
Alessandra Carbone
,
Franco Montagna
Article dans une revue
istex
hal-03911515v1
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