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Cirscan: a shiny application to identify differentially active sponge mechanisms and visualize circRNA-miRNA-mRNA networks
Rose-Marie Fraboulet
,
Yanis Si Ahmed
,
Marc Aubry
,
Sébastien Corre
,
Marie-Dominique Galibert
Article dans une revue
hal-04540383v1
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Exploring the IRE1 interactome: from canonical signaling functions to unexpected roles
Simon Le Goupil
,
Hadrien Laprade
,
Marc Aubry
,
Eric Chevet
Article dans une revue
hal-04540346v1
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IRE1 endoribonuclease signaling promotes myeloid cell infiltration in glioblastoma
Joanna Obacz
,
Jérôme Archambeau
,
Elodie Lafont
,
Manon Nivet
,
Sophie Martin
Article dans une revue
hal-04388457v1
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Non-canonical miRNA-RNA base-pairing impedes tumor suppressor activity of miR-16
Anais M. Quemener
,
Laura Bachelot
,
Marc Aubry
,
Stéphane Avner
,
Delphine Leclerc
Article dans une revue
hal-03811856v1
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A Novel Pseudogene Methylation Signature to Predict Temozolomide Outcome in Non-G-CIMP Glioblastomas
Bowen Li
,
Jiu Wang
,
Philip L.-F. Liu
,
Rui Li
,
Weihong Hu
Article dans une revue
hal-03756974v1
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Integration of Raman spectra with transcriptome data in glioblastoma multiforme defines tumour subtypes and predicts patient outcome
Pierre-Jean Le Reste
,
Eleftherios Pilalis
,
Marc Aubry
,
Mari Mcmahon
,
Luis Cano
Article dans une revue
hal-03467186v1
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The drivers of vine-plant root microbiota endosphere composition include both abiotic and plant-specific factors
Marine Biget
,
Cendrine Mony
,
Marc Aubry
,
Olivier Jambon
,
Achim Quaiser
Article dans une revue
hal-03413043v1
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Integrative analysis identifies an immune-relevant epigenetic signature for prognostication of non-G-CIMP glioblastomas
Anan Yin
,
Zhende Shang
,
Amandine Etcheverry
,
Yalong He
,
Marc Aubry
Article dans une revue
hal-03206742v1
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CRISPR screens identify tumor-promoting genes conferring melanoma cell plasticity and resistance
Arthur Gautron
,
Laura Bachelot
,
Marc Aubry
,
Delphine Leclerc
,
Anaïs M Quéméner
Article dans une revue
hal-03194524v1
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Cytosine methylation of mature microRNAs inhibits their functions and is associated with poor prognosis in glioblastoma multiforme
Mathilde Cheray
,
Amandine Etcheverry
,
Camille Jacques
,
Romain Pacaud
,
Gwenola Bougras-Cartron
Article dans une revue
hal-02500622v1
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EZH2 and KDM6B Expressions Are Associated with Specific Epigenetic Signatures during EMT in Non Small Cell Lung Carcinomas
Camille Lachat
,
Diane Bruyère
,
Amandine Etcheverry
,
Marc Aubry
,
Jean Mosser
Article dans une revue
hal-03099270v1
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Local intracerebral inhibition of IRE1 by MKC8866 sensitizes glioblastoma to irradiation/chemotherapy in vivo
Pierre Jean Le Reste
,
R Pineau
,
Konstantinos Voutetakis
,
J Samal
,
Gwenaele Jegou
Article dans une revue
hal-02959985v1
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Transcriptomics in cancer revealed by Positron Emission Tomography radiomics
Florent Tixier
,
Catherine Cheze-Le-Rest
,
Ulrike Schick
,
Brigitte Simon
,
Xavier Dufour
Article dans une revue
inserm-02541913v1
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EMT is associated with an epigenetic signature of ECM remodeling genes
Paul Peixoto
,
Amandine Etcheverry
,
Marc Aubry
,
Anaïs Missey
,
Camille Lachat
Article dans une revue
hal-02076497v1
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Novel predictive epigenetic signature for temozolomide in non-G-CIMP glioblastomas
An-An Yin
,
Ya-Long He
,
Amandine Etcheverry
,
Yu-He Liu
,
Marc Aubry
Article dans une revue
hal-02153239v1
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Rapid genetic and phenotypic changes in Pseudomonas aeruginosa clinical strains during ventilator-associated pneumonia
Elise Persyn
,
Mohamed Sassi
,
Marc Aubry
,
Martin Broly
,
Sandie Delanou
Article dans une revue
hal-02086609v1
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A five-CpG signature of microRNA methylation in non-G-CIMP glioblastoma
En-Ming Kang
,
An-An Yin
,
Ya-Long He
,
Wei-Jun Chen
,
Amandine Etcheverry
Article dans une revue
hal-02121050v1
|
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A novel prognostic six-CpG signature in glioblastomas
An-An Yin
,
Nan Lu
,
Amandine Etcheverry
,
Marc Aubry
,
Jill Barnholtz-Sloan
Article dans une revue
hal-01711026v1
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Amustaline (S-303) treatment inactivates high levels of Chikungunya virus in red-blood-cell components
Marc Aubry
,
A. Laughhunn
,
F. Santa Maria
,
M. C. Lanteri
,
A. Stassinopoulos
Article dans une revue
hal-01789241v1
|
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Integration of transcriptome and proteome profiles in glioblastoma looking for the missing link
Jean-Michel Lemée
,
Anne Clavreul
,
Marc Aubry
,
Emmanuelle Com
,
Marie de Tayrac
Article dans une revue
hal-01940252v1
|
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The expression of EMX2 lead to cell cycle arrest in glioblastoma cell line
Annabelle Monnier
,
Rachel Boniface
,
Régis Bouvet
,
Amandine Etcheverry
,
Marc Aubry
Article dans une revue
hal-01972440v1
|
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Impact of the French 3rd and 4th generation pill scare in women seeking termination of pregnancy
Ophélie Caillot
,
Marc Aubry
,
Solène Duros
,
Laurence Boyer
,
Claude van Valenberg
Article dans une revue
hal-01308004v1
|
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Integrative analysis of novel hypomethylation and gene expression signatures in glioblastomas
A. Yin
,
A. Etcheverry
,
Y. He
,
Marc Aubry
,
J. Barnholtz-Sloan
Article dans une revue
hal-01647188v1
|
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MiR-422a promotes loco-regional recurrence by targeting NT5E/CD73 in head and neck squamous cell carcinoma
Nathalie Bonnin
,
Emma Armandy
,
Julien Carras
,
Sylvain Ferrandon
,
Priscillia Battiston-Montagne
Article dans une revue
hal-01376219v1
|
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Characterizing the peritumoral brain zone in glioblastoma: a multidisciplinary analysis.
Jean-Michel Lemée
,
Anne Clavreul
,
Marc Aubry
,
Emmanuelle Com
,
Marie de Tayrac
Article dans une revue
hal-01117083v1
|
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From the core to beyond the margin: a genomic picture of glioblastoma intratumor heterogeneity
Marc Aubry
,
Marie de Tayrac
,
Amandine Etcheverry
,
Anne Clavreul
,
Stéphan Saikali
Article dans une revue
hal-01396745v1
|
|
Transcriptomic analysis of untreated and drug-treated differentiated HepaRG cells over a 2-week period.
Camille C Savary
,
Xiaoqi Jiang
,
Marc Aubry
,
Rozenn Jossé
,
Annette Kopp-Schneider
Article dans une revue
hal-01128182v1
|
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Transcriptome analysis reveals the contribution of thermal and the specific effects in cellular repsonse to millimeter wave exposure
Denis Habauzit
,
Catherine Le Quement
,
Maxim Zhadobov
,
C Martin
,
Marc Aubry
PLoS ONE, 2014, 9, 10
Article dans une revue
hal-01114575v1
|
|
DGKI Methylation Status Modulates the Prognostic Value of MGMT in Glioblastoma Patients Treated with Combined Radio-Chemotherapy with Temozolomide
Amandine Etcheverry
,
Marc Aubry
,
Ahmed Idbaih
,
Elodie Vauleon
,
Yannick Marie
Article dans une revue
hal-01358132v1
|
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A gene expression and pre-mRNA splicing signature that marks the adenoma-adenocarcinoma progression in colorectal cancer.
Marine Pesson
,
Alain Volant
,
Arnaud Uguen
,
Kilian Trillet
,
Pierre de La Grange
Article dans une revue
hal-00976068v1
|
|
Proteomic analysis underlines the usefulness of both primary adherent and stem-like cell lines for studying proteins involved in human glioblastoma
Brigitte Collet
,
Tony Avril
,
Marc Aubry
,
Abderrahmane Hamlat
,
Pierre-Jean Le Reste
Article dans une revue
hal-01063975v1
|
|
Prognostic Significance of EDN/RB, HJURP, p60/CAF-1 and PDLI4, Four New Markers in High-Grade Gliomas.
Marie de Tayrac
,
Stephan Saikali
,
Marc Aubry
,
Pascale Bellaud
,
Rachel Boniface
Article dans une revue
hal-00876093v1
|
|
Transcriptome analysis reveals the contribution of thermal and the specific effects in cellular response to millimeter wave exposure.
Denis Habauzit
,
Catherine Le Quément
,
Maxim Zhadobov
,
Catherine Martin
,
Marc Aubry
Article dans une revue
hal-01118066v1
|
|
Immune genes are associated with human glioblastoma pathology and patient survival
Elodie Vauleon
,
Avril Tony
,
Abderrahmane Hamlat
,
Amandine Etcheverry
,
Dan Cristian Chiforeanu
Article dans une revue
hal-01064487v1
|
|
Iron excess limits HHIPL-2 gene expression and decreases osteoblastic activity in human MG-63 cells.
Mathilde Doyard
,
Nadia Fatih
,
Annabelle Monnier
,
Marie-Laure Island
,
Marc Aubry
Article dans une revue
inserm-00662108v1
|
|
Whole-genome expression analysis in primary human keratinocyte cell cultures exposed to 60 GHz radiation.
Catherine Le Quément
,
Christophe Nicolas Nicolaz
,
Maxim Zhadobov
,
Fabienne Desmots
,
Ronan Sauleau
Article dans une revue
inserm-00699884v1
|
|
A 4-gene signature associated with clinical outcome in high-grade gliomas.
Marie de Tayrac
,
Marc Aubry
,
Stephan Saïkali
,
Amandine Etcheverry
,
Cyrille Surbled
Article dans une revue
inserm-00545436v1
|
|
DNA methylation in glioblastoma: impact on gene expression and clinical outcome.
Amandine Etcheverry
,
Marc Aubry
,
Marie de Tayrac
,
Elodie Vauleon
,
Rachel Boniface
Article dans une revue
inserm-00663706v1
|
|
CD9 expression can be used to predict childhood TEL/AML1-positive acute lymphoblastic leukemia: proposal for an accelerated diagnostic flowchart.
Virginie Gandemer
,
Marc Aubry
,
Mikael Roussel
,
Anne-Gaelle Rio
,
Marie de Tayrac
Article dans une revue
inserm-00435146v1
|
|
Integrative genome-wide analysis reveals a robust genomic glioblastoma signature associated with copy number driving changes in gene expression.
Marie de Tayrac
,
Amandine Etcheverry
,
Marc Aubry
,
Stephan Saïkali
,
Abderrahmane Hamlat
Article dans une revue
inserm-00352960v1
|
|
Simultaneous analysis of distinct Omics data sets with integration of biological knowledge: Multiple Factor Analysis approach.
Marie de Tayrac
,
Sébastien Lê
,
Marc Aubry
,
Jean Mosser
,
François Husson
Article dans une revue
inserm-00365978v1
|
|
Transcriptome profiling of the feeding-to-fasting transition in chicken liver.
Colette Désert
,
Michel Jacques M.J. Duclos
,
Pierre Blavy
,
Frédéric Lecerf
,
François Moreews
Article dans une revue
hal-00729919v1
|
|
Iron-related transcriptomic variations in Caco-2 cells: in silico perspectives.
Marc Aubry
,
Annabelle Monnier
,
Céline Chicault
,
Marie-Dominique Galibert
,
Anita Burgun
Article dans une revue
hal-00235440v1
|
|
Differential expression of genes related to HFE and iron status in mouse duodenal epithelium.
Emmanuelle Abgueguen
,
Bertrand Toutain
,
Hélène Bédrine
,
Céline Chicault
,
Magali Orhant
Article dans une revue
hal-00085719v1
|
|
Iron-related transcriptomic variations in CaCo-2 cells, an in vitro model of intestinal absorptive cells.
Céline Chicault
,
Bertrand Toutain
,
Annabelle Monnier
,
Marc Aubry
,
Patricia Fergelot
Article dans une revue
hal-00090513v1
|
|
Combining evidence, biomedical literature and statistical dependence: new insights for functional annotation of gene sets.
Marc Aubry
,
Annabelle Monnier
,
Céline Chicault
,
Marie de Tayrac
,
Marie-Dominique Galibert
Article dans une revue
hal-00094484v1
|
|
A new alpha chain hemoglobin variant: Hb Al-Hammadi Riyadh [alpha75(EF4)Asp-->Val (alpha2)].
N. Burnichon
,
P. Lacan
,
M. Becchi
,
I. Zanella-Cleon
,
Marc Aubry
Hemoglobin, 2006, 30, pp.155-164
Article dans une revue
hal-00313098v1
|
|
Identification by mass spectrometry of a hemoglobin variant with an elongated beta-globin chain.
P. Lacan
,
M. Becchi
,
I. Zanella-Cleon
,
Marc Aubry
,
D. Quinsat
Clin Chem, 2005, 51, pp.213-215
Article dans une revue
hal-00313099v1
|
|
Two new hemoglobin variants: Hb Brem-sur-Mer [beta9(A6)Ser-->Tyr] and Hb Passy [alpha81(F2)Ser-->Pro (alpha2)].
P. Lacan
,
M. Moreau
,
M. Becchi
,
I. Zanella-Cleon
,
Marc Aubry
Hemoglobin, 2005, 29, pp.69-75
Article dans une revue
hal-00314098v1
|
|
A new G(gamma) chain variant: Hb F-Bron [gamma20(B2)val-->Ala].
P. Lacan
,
N. Burnichon
,
M. Becchi
,
I. Zanella-Cleon
,
Marc Aubry
Hemoglobin, 2005, 29, pp.301-305
Article dans une revue
hal-00314096v1
|
|
Two new alpha chain variants: Hb Part-Dieu [alpha65(E14)Ala --> Thr (alpha2)] and Hb Decines-Charpieu [alpha69(E18)Ala --> Thr (alpha2)].
P. Lacan
,
M. Becchi
,
I. Zanella-Cleon
,
Marc Aubry
,
P. Renaudier
Hemoglobin, 2004, 28, pp.51-57
Article dans une revue
hal-00313100v1
|
|
Two new beta-chain variants: Hb Tripoli [beta26(B8)Glu-->Ala] and Hb Tizi-Ouzou [beta29(B11)Gly-->Ser].
P. Lacan
,
M. Becchi
,
I. Zanella-Cleon
,
Marc Aubry
,
M. Ffrench
Hemoglobin, 2004, 28, pp.205-212
Article dans une revue
hal-00314099v1
|
|
Two new alpha chain variants: Hb Boghe [alpha58(E7)His-->Gln, alpha2], a variant on the distal histidine, and Hb CHarolles [alpha103(G10)His-Tyr, alpha1].
P. Lacan
,
A. Francina
,
G. Souillet
,
Marc Aubry
,
N. Couprie
Hemoglobin, 1999, 23, pp.345-352
Article dans une revue
hal-00314105v1
|
|
Characterization of Hb Djelfa [beta98(FG5)Val-->Ala]] by DNA sequencing in a French Caucasian family.
P. Lacan
,
Marc Aubry
,
A. Francina
,
N. Couprie
,
L. Dementhon
Hemoglobin, 1999, 23, pp.73-77
Article dans une revue
hal-00313102v1
|
|
Devenir digestif de la viciline et de la lectine radiomarquées du pois (Pisum sativum) chez le rats
Marc Aubry
,
P. Boucrot
Reproduction Nutrition Développement, 1985, 25 (4B), pp.844-844
Article dans une revue
hal-00898343v1
|