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The crisis of the scientific mind : an investigation, a tragedy and a collective redistribution of roles

 Eric Tannier , Vincent Daubin , Sophie Quinton
Les Cahiers de Framespa : e-Storia, 2022, 40, ⟨10.4000/framespa.13150⟩
Article dans une revue hal-03714886v1
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Lateral gene transfer as a support for the tree of life.

 Sophie S Abby , Eric Tannier , Manolo Gouy , Vincent Daubin
Proceedings of the National Academy of Sciences of the United States of America, 2012, 109 (13), pp.4962-4967. ⟨10.1073/pnas.1116871109⟩
Article dans une revue hal-00752055v1

L'époque romantique contre la peine de mort

 Eric Tannier
incollection, 2011, --, pp.54-56
Article dans une revue hal-00698248v1
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Multichromosomal median and halving problems under different genomic distances

 Eric Tannier , Chunfang Zheng , David Sankoff
BMC Bioinformatics, 2009, 10 (1), pp.120. ⟨10.1186/1471-2105-10-120⟩
Article dans une revue hal-00784456v1
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Evolutionary superscaffolding and chromosome anchoring to improve Anopheles genome assemblies

 Robert Waterhouse , Sergey Aganezov , Yoann Anselmetti , Jiyoung Lee , Livio Ruzzante , et al.
BMC Biology, 2020, 18 (1), pp.1-20. ⟨10.1186/s12915-019-0728-3⟩
Article dans une revue hal-02455139v1
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Prediction of Contiguous Regions in the Amniote Ancestral Genome

 Aïda Ouangraoua , Frédéric Boyer , Andrew Mcpherson , Eric Tannier , Cedric Chauve
ISBRA 2009, 5th International Symposium on Bioinformatics Research and Applications,, May 2009, Fort Lauderdale, Florida, United States. ⟨10.1007/978-3-642-01551-9_18⟩
Communication dans un congrès hal-00368187v1
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Phylogenetic signal from rearrangements in 18 Anopheles species by joint scaffolding extant and ancestral genomes

 Yoann Anselmetti , Wandrille Duchemin , Eric Tannier , Cedric Chauve , Sèverine Bérard
BMC Genomics, 2018, 19 (S2), pp.1-15. ⟨10.1186/s12864-018-4466-7⟩
Article dans une revue hal-01791884v1
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Linearization of ancestral multichromosomal genomes

 Ján Maňuch , Murray Patterson , Roland Wittler , Cedric Chauve , Eric Tannier
BMC Bioinformatics, 2012, 13 (Suppl 19), pp.S11. ⟨10.1186/1471-2105-13-S19-S11⟩
Article dans une revue hal-00773071v1

Models and Algorithms for Genome Evolution

 Cedric Chauve , Nadia El-Mabrouk , Eric Tannier
Springer, pp.318, 2013, 978-1-4471-5297-2
Ouvrages hal-00847154v1
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A Methodological Framework for the Reconstruction of Contiguous Regions of Ancestral Genomes and its Application to Mammalian Genomes

 Eric Tannier , Cedric Chauve
[Research Report] RR-6494, INRIA. 2008, pp.26
Rapport inria-00269397v2
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Mapping ancestral genomes with massive gene loss: a matrix sandwich problem.

 Haris Gavranović , Cedric Chauve , Jérôme Salse , Eric Tannier
Bioinformatics, 2011, 27 (13), pp.i257-65. ⟨10.1093/bioinformatics/btr224⟩
Article dans une revue hal-00680540v1

ANGES: reconstructing ANcestral GEnomeS maps.

 Bradley R Jones , Ashok Rajaraman , Eric Tannier , Cedric Chauve
Bioinformatics, 2012, 28 (18), pp.2388-2390. ⟨10.1093/bioinformatics/bts457⟩
Article dans une revue hal-00733180v1
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Sorting by reversals in subquadratic time

 Eric Tannier , Marie-France Sagot
[Research Report] RR-5097, INRIA. 2004
Rapport inria-00071486v1

Effective Stochastic Local Search Algorithms for the Genomic Median Problem

 Renaud Lenne , Christine Solnon , Thomas Stützle , Eric Tannier , Mauro Birattari
Doctoral Symposium on Engineering Stochastic Local Search Algorithms (SLS-DS), Sep 2007, Bruxelles, Belgium. pp.1-5
Communication dans un congrès hal-01542514v1

Comparative Genomics

 Eric Tannier
incollection, 2010, 6938, pp.1-12
Article dans une revue hal-00539254v1

Preface : Satellite Workshop on Comparative Genomics Research in Computational Molecular Biology (RECOMB-CG 2010)

 Eric Tannier
Journal of Computational Biology, 2011, 18(9), pp.1-3
Article dans une revue hal-00698246v1
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Karyotype and Gene Order Evolution from ReconstructedExtinct Ancestors Highlight Contrasts in Genome Plasticity ofModern Rosid Crops

 Florent Murat , Rongzhi R. Zhang , Sébastien Guizard , Haris Gavranovic , Raphael Flores , et al.
Genome Biology and Evolution, 2015, 7 (3), pp.735-749. ⟨10.1093/gbe/evv014⟩
Article dans une revue hal-01133906v1
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Thirdkind: displaying phylogenetic encounters beyond 2-level reconciliation

 Simon Penel , Hugo Menet , Théo Tricou , Vincent Daubin , Eric Tannier
Bioinformatics, 2022, 38 (8), pp.2350-2352. ⟨10.1093/bioinformatics/btac062⟩
Article dans une revue hal-03563666v1

Reconstructing the architecture of the ancestral amniote genome.

 Aïda Ouangraoua , Eric Tannier , Cedric Chauve
Bioinformatics, 2011, 27, 27 (19), pp.2664-2671. ⟨10.1093/bioinformatics/btr461⟩
Article dans une revue inria-00635016v1
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MaxTiC: Fast Ranking Of A Phylogenetic Tree By Maximum Time Consistency With Lateral Gene Transfers

 Cédric Chauve , Akbar A Rafiey , Adrian A Davin , Celine Scornavacca , Philippe Veber , et al.
2017, ⟨10.1101/127548⟩
Autre publication scientifique hal-01532738v3

Perfect sorting by reversals

 M.-F. Sagot , Eric Tannier
International Computing and Combinatorics Conference, Aug 2005, Kunming, China. pp.42-51, ⟨10.1007/11533719_7⟩
Communication dans un congrès istex hal-00427848v1
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Long-range promoter–enhancer contacts are conserved during evolution and contribute to gene expression robustness

 Alexandre Laverré , Eric Tannier , Anamaria Necsulea
Genome Research, 2022, 32 (2), pp.280-296. ⟨10.1101/gr.275901.121⟩
Article dans une revue hal-03559410v1

On a modular domination game

 S. Gravier , M. Mhalla , Eric Tannier
Theoretical Computer Science, 2003, 306, pp.291-303
Article dans une revue hal-00427433v1

L'époque romantique contre la peine de mort

 Eric Tannier
Editions Universitaires Européennes, pp.176, 2011, 978-613-1-56487-1
Ouvrages hal-00750273v1
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Precise detection of rearrangement breakpoints in mammalian chromosomes

 Claire Lemaitre , Eric Tannier , Christian Gautier , Marie-France Sagot
BMC Bioinformatics, 2008, 9 (1), pp.286. ⟨10.1186/1471-2105-9-286⟩
Article dans une revue hal-00784460v1
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Gene tree species tree reconciliation with gene conversion

 Damir Hasic , Eric Tannier
Journal of Mathematical Biology, 2019, 78 (6), pp.1981-2014. ⟨10.1007/s00285-019-01331-w⟩
Article dans une revue hal-01495707v2

Evolution of gene neighborhoods within reconciled phylogenies

 Sèverine Bérard , Coralie Gallien , Bastien Boussau , Gergely J Szöllosi , Vincent Daubin , et al.
Bioinformatics, 2012, 28 (18), pp.i382-i388. ⟨10.1093/bioinformatics/bts374⟩
Article dans une revue hal-00733178v1
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Breaking Good: Accounting for Fragility of Genomic Regions in Rearrangement Distance Estimation

 Priscila Biller , Laurent Guéguen , Carole Knibbe , Eric Tannier
Genome Biology and Evolution, 2016, 8 (5), pp.1427-1439. ⟨10.1093/gbe/evw083⟩
Article dans une revue hal-01334923v1

Sorting Signed Permutations by Reversal (Reversal Sequence)

 Eric Tannier
Kao, Ming-Yang. Encyclopedia of Algorithms, Springer, pp.2028-2032, 2016, 978-1-4939-2863-7
Chapitre d'ouvrage hal-01334936v1

RECOMB Satellite Workshop on Comparative Genomics

 Eric Tannier
8. Annual RECOMB Satellite Workshop on Comparative Genomics, 2010, Ottawa, Canada. Springer, pp.303, 2010, 978-3-642-16181-0
Proceedings/Recueil des communications hal-00748561v1
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